RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 ZNF652Q9Y2D9 606 aa25.94■■□□□ 1.74
CDH11-203ENST00000562325 CCDC88AQ3V6T2 1871 aa25.94■■□□□ 1.74
CDH11-203ENST00000562325 NPHP1O15259 732 aa25.93■■□□□ 1.74
CDH11-203ENST00000562325 PHACTR3Q96KR7 559 aa25.93■■□□□ 1.74
CDH11-203ENST00000562325 BCORQ6W2J9 1755 aa25.92■■□□□ 1.74
CDH11-203ENST00000562325 SNRPA1P09661 255 aaKnown RBP25.92■■□□□ 1.74
CDH11-203ENST00000562325 PRPF40BQ6NWY9 871 aaKnown RBP25.92■■□□□ 1.74
CDH11-203ENST00000562325 HTATSF1O43719 755 aaKnown RBP25.91■■□□□ 1.74
CDH11-203ENST00000562325 COL13A1Q5TAT6 717 aaPredicted RBP25.91■■□□□ 1.74
CDH11-203ENST00000562325 RTF1Q92541 710 aaKnown RBP25.9■■□□□ 1.74
CDH11-203ENST00000562325 ARFGEF2Q9Y6D5 1785 aa25.9■■□□□ 1.74
CDH11-203ENST00000562325 KLRG2A4D1S0 409 aaPredicted RBP25.89■■□□□ 1.74
CDH11-203ENST00000562325 USP16Q9Y5T5 823 aa25.89■■□□□ 1.74
CDH11-203ENST00000562325 KCNQ3O43525 872 aa25.88■■□□□ 1.73
CDH11-203ENST00000562325 NBPF5PQ86XG9 351 aaPredicted RBP25.88■■□□□ 1.73
CDH11-203ENST00000562325 IQCA1LA6NCM1 817 aa25.87■■□□□ 1.73
CDH11-203ENST00000562325 CHADLQ6NUI6 762 aa25.87■■□□□ 1.73
CDH11-203ENST00000562325 C7orf43Q8WVR3 580 aa25.87■■□□□ 1.73
CDH11-203ENST00000562325 CREBZFQ9NS37 354 aa25.87■■□□□ 1.73
CDH11-203ENST00000562325 NPR1P16066 1061 aa25.86■■□□□ 1.73
CDH11-203ENST00000562325 TPTE2Q6XPS3 522 aa25.86■■□□□ 1.73
CDH11-203ENST00000562325 CCDC24Q8N4L8 307 aa25.86■■□□□ 1.73
CDH11-203ENST00000562325 L3MBTL3Q96JM7 780 aaPredicted RBP25.86■■□□□ 1.73
CDH11-203ENST00000562325 CCDC93Q567U6 631 aa25.85■■□□□ 1.73
CDH11-203ENST00000562325 ZNF219Q9P2Y4 722 aaPredicted RBP25.85■■□□□ 1.73
CDH11-203ENST00000562325 SLX4Q8IY92 1834 aa25.85■■□□□ 1.73
CDH11-203ENST00000562325 HSPA1AP0DMV8 641 aaKnown RBP25.83■■□□□ 1.73
CDH11-203ENST00000562325 HSPA1BP0DMV9 641 aaKnown RBP25.83■■□□□ 1.73
CDH11-203ENST00000562325 U2AF1L5P0DN76 240 aaPredicted RBP25.83■■□□□ 1.73
CDH11-203ENST00000562325 U2AF1Q01081 240 aaKnown RBP eCLIP25.83■■□□□ 1.73
CDH11-203ENST00000562325 TNS4Q8IZW8 715 aa25.83■■□□□ 1.73
CDH11-203ENST00000562325 DDNO94850 711 aaPredicted RBP25.82■■□□□ 1.72
CDH11-203ENST00000562325 RTKN2Q8IZC4 609 aa25.82■■□□□ 1.72
CDH11-203ENST00000562325 FKBP4Q02790 459 aaKnown RBP eCLIP25.81■■□□□ 1.72
CDH11-203ENST00000562325 LDHDQ86WU2 507 aa25.81■■□□□ 1.72
CDH11-203ENST00000562325 MCM10Q7L590 875 aa25.8■■□□□ 1.72
CDH11-203ENST00000562325 NIP7Q9Y221 180 aaKnown RBP eCLIP25.8■■□□□ 1.72
CDH11-203ENST00000562325 SCN4AP35499 1836 aa25.79■■□□□ 1.72
CDH11-203ENST00000562325 NBPF26B4DH59 902 aa25.79■■□□□ 1.72
CDH11-203ENST00000562325 PPP2R1AP30153 589 aa25.79■■□□□ 1.72
CDH11-203ENST00000562325 ALDH1B1P30837 517 aa25.79■■□□□ 1.72
CDH11-203ENST00000562325 CNGB1Q14028 1251 aaPredicted RBP25.79■■□□□ 1.72
CDH11-203ENST00000562325 TAF7Q15545 349 aaPredicted RBP25.79■■□□□ 1.72
CDH11-203ENST00000562325 NBPF10Q6P3W6 841 aaKnown RBP25.79■■□□□ 1.72
CDH11-203ENST00000562325 NBPF15Q8N660 670 aa25.79■■□□□ 1.72
CDH11-203ENST00000562325 PRAMEF22A3QJZ6 481 aa25.78■■□□□ 1.72
CDH11-203ENST00000562325 PIP4K2AP48426 406 aaPredicted RBP25.77■■□□□ 1.72
CDH11-203ENST00000562325 PNISRQ8TF01 805 aaKnown RBP25.77■■□□□ 1.72
CDH11-203ENST00000562325 TAF1DQ9H5J8 278 aaPredicted RBP25.77■■□□□ 1.72
CDH11-203ENST00000562325 PASKQ96RG2 1323 aa25.77■■□□□ 1.72
CDH11-203ENST00000562325 ERVV-1B6SEH8 477 aa25.75■■□□□ 1.71
CDH11-203ENST00000562325 NYXQ9GZU5 481 aa25.75■■□□□ 1.71
CDH11-203ENST00000562325 CRY2Q49AN0 593 aa25.74■■□□□ 1.71
CDH11-203ENST00000562325 GRIPAP1Q4V328 841 aa25.74■■□□□ 1.71
CDH11-203ENST00000562325 CC2D2BQ6DHV5 1058 aa25.74■■□□□ 1.71
CDH11-203ENST00000562325 CACNA1SQ13698 1873 aa25.74■■□□□ 1.71
CDH11-203ENST00000562325 CNTNAP1P78357 1384 aa25.73■■□□□ 1.71
CDH11-203ENST00000562325 IBTKQ9P2D0 1353 aaPredicted RBP25.73■■□□□ 1.71
CDH11-203ENST00000562325 NEFMP07197 916 aa25.73■■□□□ 1.71
CDH11-203ENST00000562325 POTEIP0CG38 1075 aa25.73■■□□□ 1.71
CDH11-203ENST00000562325 POTEJP0CG39 1038 aa25.73■■□□□ 1.71
CDH11-203ENST00000562325 PSMD1Q99460 953 aa25.73■■□□□ 1.71
CDH11-203ENST00000562325 RIC1Q4ADV7 1423 aa25.72■■□□□ 1.71
CDH11-203ENST00000562325 PNMA8AQ86V59 439 aaPredicted RBP25.72■■□□□ 1.71
CDH11-203ENST00000562325 HACL1Q9UJ83 578 aa25.72■■□□□ 1.71
CDH11-203ENST00000562325 LAMB4A4D0S4 1761 aa25.72■■□□□ 1.71
CDH11-203ENST00000562325 FZD9O00144 591 aa25.71■■□□□ 1.71
CDH11-203ENST00000562325 GTF2E1P29083 439 aaPredicted RBP25.71■■□□□ 1.71
CDH11-203ENST00000562325 DCTN1Q14203 1278 aa25.71■■□□□ 1.71
CDH11-203ENST00000562325 ZNF277Q9NRM2 450 aaPredicted RBP25.71■■□□□ 1.71
CDH11-203ENST00000562325 SNED1Q8TER0 1413 aa25.71■■□□□ 1.71
CDH11-203ENST00000562325 IARSP41252 1262 aaKnown RBP25.7■■□□□ 1.7
CDH11-203ENST00000562325 ITGBL1O95965 494 aaPredicted RBP25.69■■□□□ 1.7
CDH11-203ENST00000562325 HLFQ16534 295 aa25.69■■□□□ 1.7
CDH11-203ENST00000562325 GPC2Q8N158 579 aa25.69■■□□□ 1.7
CDH11-203ENST00000562325 MKRN1Q9UHC7 482 aaKnown RBP25.69■■□□□ 1.7
CDH11-203ENST00000562325 ZNF541Q9H0D2 1346 aa25.68■■□□□ 1.7
CDH11-203ENST00000562325 TMEM88BA6NKF7 163 aa25.68■■□□□ 1.7
CDH11-203ENST00000562325 HOXA10P31260 410 aaPredicted RBP25.68■■□□□ 1.7
CDH11-203ENST00000562325 MAP3K15Q6ZN16 1313 aa25.67■■□□□ 1.7
CDH11-203ENST00000562325 EPHX2P34913 555 aa25.67■■□□□ 1.7
CDH11-203ENST00000562325 SYNE4Q8N205 404 aa25.67■■□□□ 1.7
CDH11-203ENST00000562325 ERBB4Q15303 1308 aa25.66■■□□□ 1.7
CDH11-203ENST00000562325 KIF6Q6ZMV9 814 aa25.66■■□□□ 1.7
CDH11-203ENST00000562325 JDP2Q8WYK2 163 aa25.66■■□□□ 1.7
CDH11-203ENST00000562325 ADAMTSL1Q8N6G6 1762 aa25.66■■□□□ 1.7
CDH11-203ENST00000562325 PNNQ9H307 717 aaKnown RBP25.65■■□□□ 1.7
CDH11-203ENST00000562325 PRDM10Q9NQV6 1147 aa25.65■■□□□ 1.7
CDH11-203ENST00000562325 KDM3BQ7LBC6 1761 aa25.64■■□□□ 1.7
CDH11-203ENST00000562325 EIF4A1P60842 406 aaKnown RBP25.64■■□□□ 1.7
CDH11-203ENST00000562325 EAPPQ56P03 285 aaPredicted RBP25.64■■□□□ 1.7
CDH11-203ENST00000562325 ABCC12Q96J65 1359 aa25.64■■□□□ 1.69
CDH11-203ENST00000562325 FAM177BA6PVY3 158 aa25.63■■□□□ 1.69
CDH11-203ENST00000562325 OLFM4Q6UX06 510 aa25.63■■□□□ 1.69
CDH11-203ENST00000562325 CAPN15O75808 1086 aa25.62■■□□□ 1.69
CDH11-203ENST00000562325 RPGRQ92834 1020 aaKnown RBP25.62■■□□□ 1.69
CDH11-203ENST00000562325 CRAMP1Q96RY5 1269 aa25.62■■□□□ 1.69
CDH11-203ENST00000562325 PLEKHF1Q96S99 279 aa25.62■■□□□ 1.69
CDH11-203ENST00000562325 MIS18AQ9NYP9 233 aa25.62■■□□□ 1.69
CDH11-203ENST00000562325 EIF6P56537 245 aaKnown RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms