RNA–Protein interactions for RNA: ENST00000562136.1

HERC2-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-202ENST00000562136 STYK1Q6J9G0 422 aa16.71■□□□□ 0.27
HERC2-202ENST00000562136 NBPF10Q6P3W6 841 aaKnown RBP16.71■□□□□ 0.27
HERC2-202ENST00000562136 NBPF15Q8N660 670 aa16.71■□□□□ 0.27
HERC2-202ENST00000562136 PLEKHF1Q96S99 279 aa16.71■□□□□ 0.27
HERC2-202ENST00000562136 RRAGCQ9HB90 399 aa16.71■□□□□ 0.27
HERC2-202ENST00000562136 SRGNP10124 158 aa16.7■□□□□ 0.26
HERC2-202ENST00000562136 DCTN1Q14203 1278 aa16.7■□□□□ 0.26
HERC2-202ENST00000562136 IFFO2Q5TF58 517 aa16.7■□□□□ 0.26
HERC2-202ENST00000562136 CNBD1Q8NA66 436 aa16.7■□□□□ 0.26
HERC2-202ENST00000562136 NUP98P52948 1817 aa16.7■□□□□ 0.26
HERC2-202ENST00000562136 ZNF330Q9Y3S2 320 aaPredicted RBP16.69■□□□□ 0.26
HERC2-202ENST00000562136 POTECB2RU33 542 aa16.68■□□□□ 0.26
HERC2-202ENST00000562136 VEGFAP15692 232 aaPredicted RBP16.68■□□□□ 0.26
HERC2-202ENST00000562136 NPM2Q86SE8 214 aaKnown RBP16.68■□□□□ 0.26
HERC2-202ENST00000562136 C16orf71Q8IYS4 520 aaPredicted RBP16.68■□□□□ 0.26
HERC2-202ENST00000562136 C7orf43Q8WVR3 580 aa16.68■□□□□ 0.26
HERC2-202ENST00000562136 CNKSR1Q969H4 720 aa16.68■□□□□ 0.26
HERC2-202ENST00000562136 C21orf2O43822 256 aa16.67■□□□□ 0.26
HERC2-202ENST00000562136 PIP4K2AP48426 406 aaPredicted RBP16.67■□□□□ 0.26
HERC2-202ENST00000562136 ST5P78524 1137 aa16.67■□□□□ 0.26
HERC2-202ENST00000562136 CCDC24Q8N4L8 307 aa16.67■□□□□ 0.26
HERC2-202ENST00000562136 ZNF622Q969S3 477 aaKnown RBP eCLIP16.67■□□□□ 0.26
HERC2-202ENST00000562136 MASTLQ96GX5 879 aa16.67■□□□□ 0.26
HERC2-202ENST00000562136 ZNF652Q9Y2D9 606 aa16.67■□□□□ 0.26
HERC2-202ENST00000562136 JMYQ8N9B5 988 aa16.66■□□□□ 0.26
HERC2-202ENST00000562136 SMC1BQ8NDV3 1235 aa16.66■□□□□ 0.26
HERC2-202ENST00000562136 PNISRQ8TF01 805 aaKnown RBP16.66■□□□□ 0.26
HERC2-202ENST00000562136 SOGA3Q5TF21 947 aa16.65■□□□□ 0.26
HERC2-202ENST00000562136 PRPF40BQ6NWY9 871 aaKnown RBP16.65■□□□□ 0.26
HERC2-202ENST00000562136 EIF4A1P60842 406 aaKnown RBP16.64■□□□□ 0.25
HERC2-202ENST00000562136 NFE2L2Q16236 605 aa16.64■□□□□ 0.25
HERC2-202ENST00000562136 NBPF5PQ86XG9 351 aaPredicted RBP16.64■□□□□ 0.25
HERC2-202ENST00000562136 KLRG1Q96E93 195 aa16.64■□□□□ 0.25
HERC2-202ENST00000562136 ERVV-1B6SEH8 477 aa16.63■□□□□ 0.25
HERC2-202ENST00000562136 TPTE2Q6XPS3 522 aa16.63■□□□□ 0.25
HERC2-202ENST00000562136 TAOK3Q9H2K8 898 aa16.63■□□□□ 0.25
HERC2-202ENST00000562136 MIS18AQ9NYP9 233 aa16.63■□□□□ 0.25
HERC2-202ENST00000562136 SCN4AP35499 1836 aa16.63■□□□□ 0.25
HERC2-202ENST00000562136 NPR1P16066 1061 aa16.62■□□□□ 0.25
HERC2-202ENST00000562136 HLFQ16534 295 aa16.62■□□□□ 0.25
HERC2-202ENST00000562136 ERFEQ4G0M1 354 aa16.62■□□□□ 0.25
HERC2-202ENST00000562136 DPY19L2Q6NUT2 758 aa16.62■□□□□ 0.25
HERC2-202ENST00000562136 NIP7Q9Y221 180 aaKnown RBP eCLIP16.62■□□□□ 0.25
HERC2-202ENST00000562136 RIC1Q4ADV7 1423 aa16.62■□□□□ 0.25
HERC2-202ENST00000562136 SNED1Q8TER0 1413 aa16.62■□□□□ 0.25
HERC2-202ENST00000562136 PNNQ9H307 717 aaKnown RBP16.61■□□□□ 0.25
HERC2-202ENST00000562136 NEFMP07197 916 aa16.6■□□□□ 0.25
HERC2-202ENST00000562136 HTRA3P83110 453 aa16.6■□□□□ 0.25
HERC2-202ENST00000562136 CRY2Q49AN0 593 aa16.6■□□□□ 0.25
HERC2-202ENST00000562136 ERBB4Q15303 1308 aa16.6■□□□□ 0.25
HERC2-202ENST00000562136 IBTKQ9P2D0 1353 aaPredicted RBP16.6■□□□□ 0.25
HERC2-202ENST00000562136 NPHP1O15259 732 aa16.59■□□□□ 0.25
HERC2-202ENST00000562136 ZNF219Q9P2Y4 722 aaPredicted RBP16.59■□□□□ 0.25
HERC2-202ENST00000562136 MAP3K15Q6ZN16 1313 aa16.59■□□□□ 0.25
HERC2-202ENST00000562136 CCDC93Q567U6 631 aa16.58■□□□□ 0.24
HERC2-202ENST00000562136 LRP10Q7Z4F1 713 aa16.58■□□□□ 0.24
HERC2-202ENST00000562136 L3MBTL3Q96JM7 780 aaPredicted RBP16.58■□□□□ 0.24
HERC2-202ENST00000562136 BABAM1Q9NWV8 329 aa16.58■□□□□ 0.24
HERC2-202ENST00000562136 FKBP4Q02790 459 aaKnown RBP eCLIP16.57■□□□□ 0.24
HERC2-202ENST00000562136 RALBP1Q15311 655 aa16.57■□□□□ 0.24
HERC2-202ENST00000562136 THUMPD2Q9BTF0 503 aaKnown RBP16.57■□□□□ 0.24
HERC2-202ENST00000562136 ABCC12Q96J65 1359 aa16.56■□□□□ 0.24
HERC2-202ENST00000562136 ALDH1B1P30837 517 aa16.56■□□□□ 0.24
HERC2-202ENST00000562136 HOXA10P31260 410 aaPredicted RBP16.56■□□□□ 0.24
HERC2-202ENST00000562136 TTLL7Q6ZT98 887 aa16.56■□□□□ 0.24
HERC2-202ENST00000562136 ZNF34Q8IZ26 560 aa16.56■□□□□ 0.24
HERC2-202ENST00000562136 RTKN2Q8IZC4 609 aa16.56■□□□□ 0.24
HERC2-202ENST00000562136 NYXQ9GZU5 481 aa16.56■□□□□ 0.24
HERC2-202ENST00000562136 ADAMTSL1Q8N6G6 1762 aa16.56■□□□□ 0.24
HERC2-202ENST00000562136 UBN2Q6ZU65 1347 aa16.55■□□□□ 0.24
HERC2-202ENST00000562136 MAPK8IP3Q9UPT6 1336 aa16.55■□□□□ 0.24
HERC2-202ENST00000562136 DDNO94850 711 aaPredicted RBP16.55■□□□□ 0.24
HERC2-202ENST00000562136 PDIA6Q15084 440 aa16.55■□□□□ 0.24
HERC2-202ENST00000562136 ANKRD36CQ5JPF3 1778 aa16.54■□□□□ 0.24
HERC2-202ENST00000562136 GIGYF2Q6Y7W6 1299 aaKnown RBP16.54■□□□□ 0.24
HERC2-202ENST00000562136 PSMD1Q99460 953 aa16.54■□□□□ 0.24
HERC2-202ENST00000562136 CHADLQ6NUI6 762 aa16.53■□□□□ 0.24
HERC2-202ENST00000562136 OLFM4Q6UX06 510 aa16.53■□□□□ 0.24
HERC2-202ENST00000562136 RRP7AQ9Y3A4 280 aaKnown RBP16.53■□□□□ 0.24
HERC2-202ENST00000562136 IQCA1LA6NCM1 817 aa16.52■□□□□ 0.24
HERC2-202ENST00000562136 FZD9O00144 591 aa16.52■□□□□ 0.24
HERC2-202ENST00000562136 NTSR2O95665 410 aa16.52■□□□□ 0.24
HERC2-202ENST00000562136 SUSD4Q5VX71 490 aa16.52■□□□□ 0.24
HERC2-202ENST00000562136 CC2D2BQ6DHV5 1058 aa16.52■□□□□ 0.24
HERC2-202ENST00000562136 KIF6Q6ZMV9 814 aa16.52■□□□□ 0.24
HERC2-202ENST00000562136 FAM177BA6PVY3 158 aa16.51■□□□□ 0.23
HERC2-202ENST00000562136 TMPOP42166 694 aaKnown RBP16.51■□□□□ 0.23
HERC2-202ENST00000562136 RIPK4P57078 832 aa16.51■□□□□ 0.23
HERC2-202ENST00000562136 GRIPAP1Q4V328 841 aa16.51■□□□□ 0.23
HERC2-202ENST00000562136 NUTM1Q86Y26 1132 aa16.51■□□□□ 0.23
HERC2-202ENST00000562136 CRAMP1Q96RY5 1269 aa16.51■□□□□ 0.23
HERC2-202ENST00000562136 TAF1DQ9H5J8 278 aaPredicted RBP16.51■□□□□ 0.23
HERC2-202ENST00000562136 ZNF277Q9NRM2 450 aaPredicted RBP16.51■□□□□ 0.23
HERC2-202ENST00000562136 TSPYL4Q9UJ04 414 aa16.51■□□□□ 0.23
HERC2-202ENST00000562136 LAMB2P55268 1798 aa16.51■□□□□ 0.23
HERC2-202ENST00000562136 PASKQ96RG2 1323 aa16.5■□□□□ 0.23
HERC2-202ENST00000562136 COL4A5P29400 1685 aa16.5■□□□□ 0.23
HERC2-202ENST00000562136 POTEIP0CG38 1075 aa16.5■□□□□ 0.23
HERC2-202ENST00000562136 POTEJP0CG39 1038 aa16.5■□□□□ 0.23
HERC2-202ENST00000562136 MYL6BP14649 208 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms