RNA–Protein interactions for RNA: ENST00000562100.5

PDPR-204, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, human

TSL 5

Gene PDPR, Length 1,643 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDPR-204	ENST00000562100	NKX1-1	Q15270	411 aa	Predicted RBP	11.2	□□□□□ -0.62
PDPR-204	ENST00000562100	LARP1	Q6PKG0	1096 aa	Known RBP	11.2	□□□□□ -0.62
PDPR-204	ENST00000562100	PPP1R42	Q7Z4L9	355 aa		11.2	□□□□□ -0.62
PDPR-204	ENST00000562100	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.2	□□□□□ -0.62
PDPR-204	ENST00000562100	TNS2	Q63HR2	1409 aa		11.2	□□□□□ -0.62
PDPR-204	ENST00000562100	COL15A1	P39059	1388 aa		11.2	□□□□□ -0.62
PDPR-204	ENST00000562100	APBB1	O00213	710 aa		11.2	□□□□□ -0.62
PDPR-204	ENST00000562100	REC8	O95072	547 aa		11.2	□□□□□ -0.62
PDPR-204	ENST00000562100	ANXA1	P04083	346 aa		11.2	□□□□□ -0.62
PDPR-204	ENST00000562100	RXRB	P28702	533 aa		11.2	□□□□□ -0.62
PDPR-204	ENST00000562100	NEXN	Q0ZGT2	675 aa		11.2	□□□□□ -0.62
PDPR-204	ENST00000562100	PROSER3	Q2NL68	480 aa		11.2	□□□□□ -0.62
PDPR-204	ENST00000562100	KIF1BP	Q96EK5	621 aa		11.2	□□□□□ -0.62
PDPR-204	ENST00000562100	GJD4	Q96KN9	370 aa	Predicted RBP	11.2	□□□□□ -0.62
PDPR-204	ENST00000562100	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.2	□□□□□ -0.62
PDPR-204	ENST00000562100	ANKRD36C	Q5JPF3	1778 aa		11.19	□□□□□ -0.62
PDPR-204	ENST00000562100	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.19	□□□□□ -0.62
PDPR-204	ENST00000562100	SLC39A6	Q13433	755 aa		11.19	□□□□□ -0.62
PDPR-204	ENST00000562100	ZNF496	Q96IT1	587 aa	Predicted RBP	11.19	□□□□□ -0.62
PDPR-204	ENST00000562100	SPATA31A5	Q5VU36	1347 aa		11.18	□□□□□ -0.62
PDPR-204	ENST00000562100	SPATA31A7	Q8IWB4	1347 aa		11.18	□□□□□ -0.62
PDPR-204	ENST00000562100	PRAMEF22	A3QJZ6	481 aa		11.18	□□□□□ -0.62
PDPR-204	ENST00000562100	GRM8	O00222	908 aa		11.18	□□□□□ -0.62
PDPR-204	ENST00000562100	SRGAP3	O43295	1099 aa		11.18	□□□□□ -0.62
PDPR-204	ENST00000562100	NFKBIB	Q15653	356 aa		11.18	□□□□□ -0.62
PDPR-204	ENST00000562100	ERC1	Q8IUD2	1116 aa		11.18	□□□□□ -0.62
PDPR-204	ENST00000562100	ANTXR1	Q9H6X2	564 aa		11.18	□□□□□ -0.62
PDPR-204	ENST00000562100	KAT6B	Q8WYB5	2073 aa		11.18	□□□□□ -0.62
PDPR-204	ENST00000562100	USP42	Q9H9J4	1324 aa	Known RBP	11.17	□□□□□ -0.62
PDPR-204	ENST00000562100	MYH3	P11055	1940 aa		11.17	□□□□□ -0.62
PDPR-204	ENST00000562100	ERC2	O15083	957 aa		11.17	□□□□□ -0.62
PDPR-204	ENST00000562100	EPB41L2	O43491	1005 aa	Known RBP	11.17	□□□□□ -0.62
PDPR-204	ENST00000562100	SURF6	O75683	361 aa	Known RBP	11.17	□□□□□ -0.62
PDPR-204	ENST00000562100	RIC3	Q7Z5B4	369 aa		11.17	□□□□□ -0.62
PDPR-204	ENST00000562100	METTL22	Q9BUU2	404 aa	Predicted RBP	11.17	□□□□□ -0.62
PDPR-204	ENST00000562100	SPATA31A1	Q5TZJ5	1347 aa		11.17	□□□□□ -0.62
PDPR-204	ENST00000562100	ONECUT3	O60422	494 aa	Predicted RBP	11.17	□□□□□ -0.62
PDPR-204	ENST00000562100	EVA1C	P58658	441 aa		11.17	□□□□□ -0.62
PDPR-204	ENST00000562100	RABEP1	Q15276	862 aa		11.17	□□□□□ -0.62
PDPR-204	ENST00000562100	LRP10	Q7Z4F1	713 aa		11.17	□□□□□ -0.62
PDPR-204	ENST00000562100	RHPN1	Q8TCX5	695 aa		11.17	□□□□□ -0.62
PDPR-204	ENST00000562100	KIF2C	Q99661	725 aa		11.17	□□□□□ -0.62
PDPR-204	ENST00000562100	DISP2	A7MBM2	1401 aa		11.16	□□□□□ -0.62
PDPR-204	ENST00000562100	TTC41P	Q6P2S7	1318 aa		11.16	□□□□□ -0.62
PDPR-204	ENST00000562100	DOT1L	Q8TEK3	1739 aa		11.16	□□□□□ -0.62
PDPR-204	ENST00000562100	IL27	Q8NEV9	243 aa		11.16	□□□□□ -0.62
PDPR-204	ENST00000562100	XAGE3	Q8WTP9	111 aa		11.16	□□□□□ -0.62
PDPR-204	ENST00000562100	USP26	Q9BXU7	913 aa		11.16	□□□□□ -0.62
PDPR-204	ENST00000562100	NEURL1B	A8MQ27	555 aa		11.15	□□□□□ -0.62
PDPR-204	ENST00000562100	ANKRD13D	Q6ZTN6	518 aa		11.15	□□□□□ -0.62
PDPR-204	ENST00000562100	CHMP5	Q9NZZ3	219 aa		11.15	□□□□□ -0.62
PDPR-204	ENST00000562100	CIC	Q96RK0	1608 aa	Predicted RBP	11.14	□□□□□ -0.63
PDPR-204	ENST00000562100	SOCS7	O14512	581 aa		11.14	□□□□□ -0.63
PDPR-204	ENST00000562100	MYL6B	P14649	208 aa		11.14	□□□□□ -0.63
PDPR-204	ENST00000562100	AIMP1	Q12904	312 aa	Known RBP	11.14	□□□□□ -0.63
PDPR-204	ENST00000562100	CWF19L2	Q2TBE0	894 aa	Known RBP	11.14	□□□□□ -0.63
PDPR-204	ENST00000562100	COPS6	Q7L5N1	327 aa		11.14	□□□□□ -0.63
PDPR-204	ENST00000562100	SLK	Q9H2G2	1235 aa	Predicted RBP	11.14	□□□□□ -0.63
PDPR-204	ENST00000562100	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.14	□□□□□ -0.63
PDPR-204	ENST00000562100	IGKV5-2	P06315	115 aa		11.13	□□□□□ -0.63
PDPR-204	ENST00000562100	OS9	Q13438	667 aa	Predicted RBP	11.13	□□□□□ -0.63
PDPR-204	ENST00000562100	GCKR	Q14397	625 aa		11.13	□□□□□ -0.63
PDPR-204	ENST00000562100	PLBD2	Q8NHP8	589 aa		11.13	□□□□□ -0.63
PDPR-204	ENST00000562100	GPATCH3	Q96I76	525 aa		11.13	□□□□□ -0.63
PDPR-204	ENST00000562100	ESYT1	Q9BSJ8	1104 aa		11.13	□□□□□ -0.63
PDPR-204	ENST00000562100	STRN4	Q9NRL3	753 aa		11.13	□□□□□ -0.63
PDPR-204	ENST00000562100	USP16	Q9Y5T5	823 aa		11.13	□□□□□ -0.63
PDPR-204	ENST00000562100	NUP98	P52948	1817 aa		11.13	□□□□□ -0.63
PDPR-204	ENST00000562100		K7ELQ4	463 aa	Predicted RBP	11.13	□□□□□ -0.63
PDPR-204	ENST00000562100	MCC	P23508	829 aa		11.13	□□□□□ -0.63
PDPR-204	ENST00000562100	BARGIN	Q6ZT62	677 aa		11.13	□□□□□ -0.63
PDPR-204	ENST00000562100	CLASRP	Q8N2M8	674 aa	Known RBP	11.13	□□□□□ -0.63
PDPR-204	ENST00000562100	SUCLG2	Q96I99	432 aa		11.13	□□□□□ -0.63
PDPR-204	ENST00000562100	IL1RAPL2	Q9NP60	686 aa		11.13	□□□□□ -0.63
PDPR-204	ENST00000562100	EP400	Q96L91	3159 aa		11.13	□□□□□ -0.63
PDPR-204	ENST00000562100	TRIM6-TRIM34	B2RNG4	842 aa		11.12	□□□□□ -0.63
PDPR-204	ENST00000562100	GLRX3	O76003	335 aa	Known RBP	11.12	□□□□□ -0.63
PDPR-204	ENST00000562100	CHML	P26374	656 aa		11.12	□□□□□ -0.63
PDPR-204	ENST00000562100	CNTROB	Q8N137	903 aa		11.12	□□□□□ -0.63
PDPR-204	ENST00000562100	PI4K2B	Q8TCG2	481 aa		11.12	□□□□□ -0.63
PDPR-204	ENST00000562100	MYD88	Q99836	296 aa		11.12	□□□□□ -0.63
PDPR-204	ENST00000562100	BCL11A	Q9H165	835 aa		11.12	□□□□□ -0.63
PDPR-204	ENST00000562100	BICC1	Q9H694	974 aa	Known RBP	11.12	□□□□□ -0.63
PDPR-204	ENST00000562100	THRAP3	Q9Y2W1	955 aa	Known RBP	11.12	□□□□□ -0.63
PDPR-204	ENST00000562100	ANAPC15	P60006	121 aa		11.11	□□□□□ -0.63
PDPR-204	ENST00000562100	VSIG10	Q8N0Z9	540 aa		11.11	□□□□□ -0.63
PDPR-204	ENST00000562100	IL17RA	Q96F46	866 aa		11.11	□□□□□ -0.63
PDPR-204	ENST00000562100	KAZALD1	Q96I82	304 aa		11.11	□□□□□ -0.63
PDPR-204	ENST00000562100	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.11	□□□□□ -0.63
PDPR-204	ENST00000562100	SPEF2	Q9C093	1822 aa		11.11	□□□□□ -0.63
PDPR-204	ENST00000562100	RREB1	Q92766	1687 aa		11.1	□□□□□ -0.63
PDPR-204	ENST00000562100	ST18	O60284	1047 aa		11.1	□□□□□ -0.63
PDPR-204	ENST00000562100	DDIT3	P35638	169 aa		11.1	□□□□□ -0.63
PDPR-204	ENST00000562100	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.1	□□□□□ -0.63	1e-6	■■■■□ 21.1
PDPR-204	ENST00000562100	FAM98C	Q17RN3	349 aa	Known RBP	11.1	□□□□□ -0.63
PDPR-204	ENST00000562100	NUTM1	Q86Y26	1132 aa		11.1	□□□□□ -0.63
PDPR-204	ENST00000562100	SEPT12	Q8IYM1	358 aa		11.1	□□□□□ -0.63
PDPR-204	ENST00000562100	RILPL2	Q969X0	211 aa		11.1	□□□□□ -0.63
PDPR-204	ENST00000562100	TMOD3	Q9NYL9	352 aa		11.1	□□□□□ -0.63
PDPR-204	ENST00000562100	CCDC9	Q9Y3X0	531 aa	Known RBP	11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms