RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 RTF1Q92541 710 aaKnown RBP19.42■□□□□ 0.7
SPG7-205ENST00000561945 CACNA1SQ13698 1873 aa19.41■□□□□ 0.7
SPG7-205ENST00000561945 SRGNP10124 158 aa19.41■□□□□ 0.7
SPG7-205ENST00000561945 CNBD1Q8NA66 436 aa19.41■□□□□ 0.7
SPG7-205ENST00000561945 SMC1BQ8NDV3 1235 aa19.41■□□□□ 0.7
SPG7-205ENST00000561945 KLRG2A4D1S0 409 aaPredicted RBP19.4■□□□□ 0.7
SPG7-205ENST00000561945 VEGFAP15692 232 aaPredicted RBP19.4■□□□□ 0.7
SPG7-205ENST00000561945 ZNF330Q9Y3S2 320 aaPredicted RBP19.4■□□□□ 0.7
SPG7-205ENST00000561945 NBPF26B4DH59 902 aa19.39■□□□□ 0.69
SPG7-205ENST00000561945 NBPF10Q6P3W6 841 aaKnown RBP19.39■□□□□ 0.69
SPG7-205ENST00000561945 NPM2Q86SE8 214 aaKnown RBP19.39■□□□□ 0.69
SPG7-205ENST00000561945 NBPF15Q8N660 670 aa19.39■□□□□ 0.69
SPG7-205ENST00000561945 JMYQ8N9B5 988 aa19.39■□□□□ 0.69
SPG7-205ENST00000561945 CNKSR1Q969H4 720 aa19.39■□□□□ 0.69
SPG7-205ENST00000561945 ZNF622Q969S3 477 aaKnown RBP eCLIP19.39■□□□□ 0.692e-7■□□□□ 9.1
SPG7-205ENST00000561945 POTECB2RU33 542 aa19.38■□□□□ 0.69
SPG7-205ENST00000561945 C21orf2O43822 256 aa19.38■□□□□ 0.69
SPG7-205ENST00000561945 ST5P78524 1137 aa19.38■□□□□ 0.69
SPG7-205ENST00000561945 TAF7Q15545 349 aaPredicted RBP19.38■□□□□ 0.69
SPG7-205ENST00000561945 MASTLQ96GX5 879 aa19.38■□□□□ 0.69
SPG7-205ENST00000561945 DCTN1Q14203 1278 aa19.37■□□□□ 0.69
SPG7-205ENST00000561945 SOGA3Q5TF21 947 aa19.37■□□□□ 0.69
SPG7-205ENST00000561945 CCDC24Q8N4L8 307 aa19.37■□□□□ 0.69
SPG7-205ENST00000561945 C7orf43Q8WVR3 580 aa19.37■□□□□ 0.69
SPG7-205ENST00000561945 KLRG1Q96E93 195 aa19.37■□□□□ 0.69
SPG7-205ENST00000561945 PLEKHF1Q96S99 279 aa19.37■□□□□ 0.69
SPG7-205ENST00000561945 ZNF652Q9Y2D9 606 aa19.37■□□□□ 0.69
SPG7-205ENST00000561945 PIP4K2AP48426 406 aaPredicted RBP19.36■□□□□ 0.69
SPG7-205ENST00000561945 PRPF40BQ6NWY9 871 aaKnown RBP19.35■□□□□ 0.69
SPG7-205ENST00000561945 DPY19L2Q6NUT2 758 aa19.34■□□□□ 0.69
SPG7-205ENST00000561945 PNISRQ8TF01 805 aaKnown RBP19.34■□□□□ 0.69
SPG7-205ENST00000561945 TAOK3Q9H2K8 898 aa19.34■□□□□ 0.69
SPG7-205ENST00000561945 NUP98P52948 1817 aa19.34■□□□□ 0.69
SPG7-205ENST00000561945 ERFEQ4G0M1 354 aa19.33■□□□□ 0.68
SPG7-205ENST00000561945 TPTE2Q6XPS3 522 aa19.33■□□□□ 0.68
SPG7-205ENST00000561945 NBPF5PQ86XG9 351 aaPredicted RBP19.33■□□□□ 0.68
SPG7-205ENST00000561945 NPR1P16066 1061 aa19.32■□□□□ 0.68
SPG7-205ENST00000561945 SCN4AP35499 1836 aa19.32■□□□□ 0.68
SPG7-205ENST00000561945 NIP7Q9Y221 180 aaKnown RBP eCLIP19.31■□□□□ 0.68
SPG7-205ENST00000561945 RIC1Q4ADV7 1423 aa19.31■□□□□ 0.68
SPG7-205ENST00000561945 SNED1Q8TER0 1413 aa19.31■□□□□ 0.68
SPG7-205ENST00000561945 ERVV-1B6SEH8 477 aa19.3■□□□□ 0.68
SPG7-205ENST00000561945 NPHP1O15259 732 aa19.3■□□□□ 0.68
SPG7-205ENST00000561945 ZNF219Q9P2Y4 722 aaPredicted RBP19.3■□□□□ 0.68
SPG7-205ENST00000561945 EIF4A1P60842 406 aaKnown RBP19.29■□□□□ 0.68
SPG7-205ENST00000561945 NFE2L2Q16236 605 aa19.29■□□□□ 0.68
SPG7-205ENST00000561945 HLFQ16534 295 aa19.29■□□□□ 0.68
SPG7-205ENST00000561945 MIS18AQ9NYP9 233 aa19.29■□□□□ 0.68
SPG7-205ENST00000561945 IBTKQ9P2D0 1353 aaPredicted RBP19.29■□□□□ 0.68
SPG7-205ENST00000561945 NEFMP07197 916 aa19.28■□□□□ 0.68
SPG7-205ENST00000561945 CRY2Q49AN0 593 aa19.28■□□□□ 0.68
SPG7-205ENST00000561945 CCDC93Q567U6 631 aa19.28■□□□□ 0.68
SPG7-205ENST00000561945 L3MBTL3Q96JM7 780 aaPredicted RBP19.27■□□□□ 0.68
SPG7-205ENST00000561945 PNNQ9H307 717 aaKnown RBP19.27■□□□□ 0.68
SPG7-205ENST00000561945 ERBB4Q15303 1308 aa19.26■□□□□ 0.67
SPG7-205ENST00000561945 MAP3K15Q6ZN16 1313 aa19.26■□□□□ 0.67
SPG7-205ENST00000561945 FKBP4Q02790 459 aaKnown RBP eCLIP19.26■□□□□ 0.67
SPG7-205ENST00000561945 ADAMTSL1Q8N6G6 1762 aa19.26■□□□□ 0.67
SPG7-205ENST00000561945 DDNO94850 711 aaPredicted RBP19.25■□□□□ 0.67
SPG7-205ENST00000561945 ALDH1B1P30837 517 aa19.25■□□□□ 0.67
SPG7-205ENST00000561945 RTKN2Q8IZC4 609 aa19.25■□□□□ 0.67
SPG7-205ENST00000561945 NYXQ9GZU5 481 aa19.25■□□□□ 0.67
SPG7-205ENST00000561945 ABCC12Q96J65 1359 aa19.24■□□□□ 0.67
SPG7-205ENST00000561945 HOXA10P31260 410 aaPredicted RBP19.23■□□□□ 0.67
SPG7-205ENST00000561945 CHADLQ6NUI6 762 aa19.23■□□□□ 0.67
SPG7-205ENST00000561945 LRP10Q7Z4F1 713 aa19.23■□□□□ 0.67
SPG7-205ENST00000561945 BABAM1Q9NWV8 329 aa19.23■□□□□ 0.67
SPG7-205ENST00000561945 IQCA1LA6NCM1 817 aa19.22■□□□□ 0.67
SPG7-205ENST00000561945 TTLL7Q6ZT98 887 aa19.22■□□□□ 0.67
SPG7-205ENST00000561945 ZNF34Q8IZ26 560 aa19.22■□□□□ 0.67
SPG7-205ENST00000561945 PSMD1Q99460 953 aa19.22■□□□□ 0.67
SPG7-205ENST00000561945 THUMPD2Q9BTF0 503 aaKnown RBP19.22■□□□□ 0.67
SPG7-205ENST00000561945 UBN2Q6ZU65 1347 aa19.22■□□□□ 0.67
SPG7-205ENST00000561945 COL13A1Q5TAT6 717 aaPredicted RBP19.21■□□□□ 0.67
SPG7-205ENST00000561945 MAPK8IP3Q9UPT6 1336 aa19.21■□□□□ 0.67
SPG7-205ENST00000561945 ANKRD36CQ5JPF3 1778 aa19.2■□□□□ 0.66
SPG7-205ENST00000561945 FZD9O00144 591 aa19.2■□□□□ 0.66
SPG7-205ENST00000561945 POTEIP0CG38 1075 aa19.2■□□□□ 0.66
SPG7-205ENST00000561945 POTEJP0CG39 1038 aa19.2■□□□□ 0.66
SPG7-205ENST00000561945 RALBP1Q15311 655 aa19.2■□□□□ 0.66
SPG7-205ENST00000561945 CC2D2BQ6DHV5 1058 aa19.2■□□□□ 0.66
SPG7-205ENST00000561945 OLFM4Q6UX06 510 aa19.2■□□□□ 0.66
SPG7-205ENST00000561945 GIGYF2Q6Y7W6 1299 aaKnown RBP19.2■□□□□ 0.66
SPG7-205ENST00000561945 KIF6Q6ZMV9 814 aa19.2■□□□□ 0.66
SPG7-205ENST00000561945 CREBZFQ9NS37 354 aa19.2■□□□□ 0.66
SPG7-205ENST00000561945 PASKQ96RG2 1323 aa19.2■□□□□ 0.66
SPG7-205ENST00000561945 FAM177BA6PVY3 158 aa19.19■□□□□ 0.66
SPG7-205ENST00000561945 IARSP41252 1262 aaKnown RBP19.19■□□□□ 0.66
SPG7-205ENST00000561945 PDIA6Q15084 440 aa19.19■□□□□ 0.66
SPG7-205ENST00000561945 GRIPAP1Q4V328 841 aa19.19■□□□□ 0.66
SPG7-205ENST00000561945 TAF1DQ9H5J8 278 aaPredicted RBP19.19■□□□□ 0.66
SPG7-205ENST00000561945 ZNF277Q9NRM2 450 aaPredicted RBP19.19■□□□□ 0.66
SPG7-205ENST00000561945 RRP7AQ9Y3A4 280 aaKnown RBP19.19■□□□□ 0.66
SPG7-205ENST00000561945 ZNF541Q9H0D2 1346 aa19.19■□□□□ 0.66
SPG7-205ENST00000561945 NTSR2O95665 410 aa19.18■□□□□ 0.66
SPG7-205ENST00000561945 GTF2E1P29083 439 aaPredicted RBP19.18■□□□□ 0.66
SPG7-205ENST00000561945 SUSD4Q5VX71 490 aa19.18■□□□□ 0.66
SPG7-205ENST00000561945 LDHDQ86WU2 507 aa19.18■□□□□ 0.66
SPG7-205ENST00000561945 NUTM1Q86Y26 1132 aa19.18■□□□□ 0.66
SPG7-205ENST00000561945 COL4A5P29400 1685 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms