RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 FOXD4L3Q6VB84 417 aaPredicted RBP13.23□□□□□ -0.29
NEIL1-202ENST00000561643 MAP3K2Q9Y2U5 619 aa13.23□□□□□ -0.29
NEIL1-202ENST00000561643 GCP02774 474 aa13.22□□□□□ -0.29
NEIL1-202ENST00000561643 TERF1P54274 439 aa13.22□□□□□ -0.29
NEIL1-202ENST00000561643 IL17RAQ96F46 866 aa13.22□□□□□ -0.29
NEIL1-202ENST00000561643 RBSNQ9H1K0 784 aa13.22□□□□□ -0.29
NEIL1-202ENST00000561643 TMEM63CQ9P1W3 806 aa13.22□□□□□ -0.29
NEIL1-202ENST00000561643 CLASRPQ8N2M8 674 aaKnown RBP13.22□□□□□ -0.29
NEIL1-202ENST00000561643 NSFL1CQ9UNZ2 370 aaKnown RBP13.22□□□□□ -0.29
NEIL1-202ENST00000561643 SYCE3A1L190 88 aa13.21□□□□□ -0.29
NEIL1-202ENST00000561643 GLRX3O76003 335 aaKnown RBP13.21□□□□□ -0.29
NEIL1-202ENST00000561643 ADGRL3Q9HAR2 1447 aa13.21□□□□□ -0.29
NEIL1-202ENST00000561643 KDM4FA0A1W2PPD8 638 aa13.21□□□□□ -0.29
NEIL1-202ENST00000561643 ANKRD24Q8TF21 1146 aa13.21□□□□□ -0.29
NEIL1-202ENST00000561643 DIAPH3Q9NSV4 1193 aa13.21□□□□□ -0.29
NEIL1-202ENST00000561643 PROSER3Q2NL68 480 aa13.21□□□□□ -0.3
NEIL1-202ENST00000561643 ORAI2Q96SN7 254 aa13.21□□□□□ -0.3
NEIL1-202ENST00000561643 SPG7Q9UQ90 795 aa13.21□□□□□ -0.3
NEIL1-202ENST00000561643 SNX14Q9Y5W7 946 aa13.21□□□□□ -0.3
NEIL1-202ENST00000561643 TTC41PQ6P2S7 1318 aa13.2□□□□□ -0.3
NEIL1-202ENST00000561643 GIGYF1O75420 1035 aaPredicted RBP13.2□□□□□ -0.3
NEIL1-202ENST00000561643 ARHGEF25Q86VW2 580 aa13.2□□□□□ -0.3
NEIL1-202ENST00000561643 LSG1Q9H089 658 aaKnown RBP13.2□□□□□ -0.3
NEIL1-202ENST00000561643 KDM3BQ7LBC6 1761 aa13.2□□□□□ -0.3
NEIL1-202ENST00000561643 WDR33Q9C0J8 1336 aaKnown RBP13.2□□□□□ -0.3
NEIL1-202ENST00000561643 ALDH1L1O75891 902 aa13.2□□□□□ -0.3
NEIL1-202ENST00000561643 CWF19L2Q2TBE0 894 aaKnown RBP13.2□□□□□ -0.3
NEIL1-202ENST00000561643 LRSAM1Q6UWE0 723 aa13.2□□□□□ -0.3
NEIL1-202ENST00000561643 KSR2Q6VAB6 950 aa13.2□□□□□ -0.3
NEIL1-202ENST00000561643 GPATCH3Q96I76 525 aa13.2□□□□□ -0.3
NEIL1-202ENST00000561643 IFIT2P09913 472 aaKnown RBP13.19□□□□□ -0.3
NEIL1-202ENST00000561643 PA2G4Q9UQ80 394 aaKnown RBP13.19□□□□□ -0.3
NEIL1-202ENST00000561643 HDAC5Q9UQL6 1122 aa13.19□□□□□ -0.3
NEIL1-202ENST00000561643 PXDNQ92626 1479 aa13.19□□□□□ -0.3
NEIL1-202ENST00000561643 MTX1Q13505 466 aa13.19□□□□□ -0.3
NEIL1-202ENST00000561643 CHD2O14647 1828 aaKnown RBP13.19□□□□□ -0.3
NEIL1-202ENST00000561643 PRAMEF22A3QJZ6 481 aa13.19□□□□□ -0.3
NEIL1-202ENST00000561643 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
NEIL1-202ENST00000561643 RUFY2Q8WXA3 655 aa13.19□□□□□ -0.3
NEIL1-202ENST00000561643 ECHDC1Q9NTX5 307 aa13.19□□□□□ -0.3
NEIL1-202ENST00000561643 RGPD2P0DJD1 1756 aa13.19□□□□□ -0.3
NEIL1-202ENST00000561643 ZBTB22O15209 634 aa13.18□□□□□ -0.3
NEIL1-202ENST00000561643 ERC1Q8IUD2 1116 aa13.18□□□□□ -0.3
NEIL1-202ENST00000561643 LARP6Q9BRS8 491 aaKnown RBP13.18□□□□□ -0.3
NEIL1-202ENST00000561643 GDPD2Q9HCC8 539 aa13.18□□□□□ -0.3
NEIL1-202ENST00000561643 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.18□□□□□ -0.3
NEIL1-202ENST00000561643 NCAPD2Q15021 1401 aa13.18□□□□□ -0.3
NEIL1-202ENST00000561643 USP42Q9H9J4 1324 aaKnown RBP13.18□□□□□ -0.3
NEIL1-202ENST00000561643 AK2P54819 239 aa13.18□□□□□ -0.3
NEIL1-202ENST00000561643 AIMP1Q12904 312 aaKnown RBP13.18□□□□□ -0.3
NEIL1-202ENST00000561643 LMO7Q8WWI1 1683 aa13.18□□□□□ -0.3
NEIL1-202ENST00000561643 DHX37Q8IY37 1157 aaKnown RBP13.17□□□□□ -0.3
NEIL1-202ENST00000561643 SYAP1Q96A49 352 aaPredicted RBP13.17□□□□□ -0.3
NEIL1-202ENST00000561643 ZNF830Q96NB3 372 aaPredicted RBP13.17□□□□□ -0.3
NEIL1-202ENST00000561643 HYPKQ9NX55 129 aa13.17□□□□□ -0.3
NEIL1-202ENST00000561643 AACSQ86V21 672 aa13.17□□□□□ -0.3
NEIL1-202ENST00000561643 DYNC1I1O14576 645 aa13.17□□□□□ -0.3
NEIL1-202ENST00000561643 DDX58O95786 925 aaKnown RBP13.17□□□□□ -0.3
NEIL1-202ENST00000561643 CASTP20810 708 aaKnown RBP13.17□□□□□ -0.3
NEIL1-202ENST00000561643 DMTNQ08495 405 aa13.17□□□□□ -0.3
NEIL1-202ENST00000561643 TTC14Q96N46 770 aa13.17□□□□□ -0.3
NEIL1-202ENST00000561643 NOL7Q9UMY1 257 aaKnown RBP13.17□□□□□ -0.3
NEIL1-202ENST00000561643 LIMCH1Q9UPQ0 1083 aa13.17□□□□□ -0.3
NEIL1-202ENST00000561643 RNF214Q8ND24 703 aa13.16□□□□□ -0.3
NEIL1-202ENST00000561643 JARID2Q92833 1246 aaPredicted RBP13.16□□□□□ -0.3
NEIL1-202ENST00000561643 GRM8O00222 908 aa13.16□□□□□ -0.3
NEIL1-202ENST00000561643 ZNF500O60304 480 aaPredicted RBP13.16□□□□□ -0.3
NEIL1-202ENST00000561643 LINS1Q8NG48 757 aa13.16□□□□□ -0.3
NEIL1-202ENST00000561643 AXIN2Q9Y2T1 843 aa13.16□□□□□ -0.3
NEIL1-202ENST00000561643 CPA1P15085 419 aa13.15□□□□□ -0.3
NEIL1-202ENST00000561643 RUFY3Q7L099 469 aa13.15□□□□□ -0.3
NEIL1-202ENST00000561643 MTERF4Q7Z6M4 381 aaKnown RBP13.15□□□□□ -0.3
NEIL1-202ENST00000561643 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.15□□□□□ -0.3
NEIL1-202ENST00000561643 G3BP1Q13283 466 aaKnown RBP eCLIP13.15□□□□□ -0.3
NEIL1-202ENST00000561643 PRPF40BQ6NWY9 871 aaKnown RBP13.15□□□□□ -0.3
NEIL1-202ENST00000561643 USP48Q86UV5 1035 aa13.15□□□□□ -0.3
NEIL1-202ENST00000561643 SUCLG2Q96I99 432 aa13.15□□□□□ -0.3
NEIL1-202ENST00000561643 SMC3Q9UQE7 1217 aa13.15□□□□□ -0.3
NEIL1-202ENST00000561643 GADD45BO75293 160 aaPredicted RBP13.15□□□□□ -0.3
NEIL1-202ENST00000561643 ZSCAN20P17040 1043 aaPredicted RBP13.15□□□□□ -0.3
NEIL1-202ENST00000561643 PTH1RQ03431 593 aa13.15□□□□□ -0.3
NEIL1-202ENST00000561643 OVOS2A0A0G2JMS6 1433 aa13.15□□□□□ -0.3
NEIL1-202ENST00000561643 RPAP1Q9BWH6 1393 aaPredicted RBP13.14□□□□□ -0.31
NEIL1-202ENST00000561643 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
NEIL1-202ENST00000561643 EVI5LQ96CN4 794 aa13.14□□□□□ -0.31
NEIL1-202ENST00000561643 JAKMIP1Q96N16 626 aaKnown RBP13.14□□□□□ -0.31
NEIL1-202ENST00000561643 BICC1Q9H694 974 aaKnown RBP13.14□□□□□ -0.31
NEIL1-202ENST00000561643 DDX21Q9NR30 783 aaKnown RBP eCLIP13.14□□□□□ -0.31
NEIL1-202ENST00000561643 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
NEIL1-202ENST00000561643 KCNJ4P48050 445 aa13.14□□□□□ -0.31
NEIL1-202ENST00000561643 TPRNQ4KMQ1 711 aa13.14□□□□□ -0.31
NEIL1-202ENST00000561643 KRT28Q7Z3Y7 464 aa13.14□□□□□ -0.31
NEIL1-202ENST00000561643 TSC1Q92574 1164 aa13.14□□□□□ -0.31
NEIL1-202ENST00000561643 CCDC94Q9BW85 323 aaPredicted RBP13.14□□□□□ -0.31
NEIL1-202ENST00000561643 PHRF1Q9P1Y6 1649 aaKnown RBP13.14□□□□□ -0.31
NEIL1-202ENST00000561643 PHF14O94880 888 aa13.14□□□□□ -0.31
NEIL1-202ENST00000561643 PDLIM2Q96JY6 352 aa13.14□□□□□ -0.31
NEIL1-202ENST00000561643 TSPY26PQ9H489 355 aa13.14□□□□□ -0.31
NEIL1-202ENST00000561643 STX6O43752 255 aa13.13□□□□□ -0.31
NEIL1-202ENST00000561643 ZSCAN22P10073 491 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms