RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 MSL1Q68DK7 614 aa20.99■□□□□ 0.95
USB1-204ENST00000561568 TTLL7Q6ZT98 887 aa20.99■□□□□ 0.95
USB1-204ENST00000561568 BCL2L12Q9HB09 334 aa20.99■□□□□ 0.95
USB1-204ENST00000561568 MAP3K15Q6ZN16 1313 aa20.99■□□□□ 0.95
USB1-204ENST00000561568 TM4SF1P30408 202 aa20.98■□□□□ 0.95
USB1-204ENST00000561568 PTGER2P43116 358 aa20.98■□□□□ 0.95
USB1-204ENST00000561568 ANKRD13DQ6ZTN6 518 aa20.98■□□□□ 0.95
USB1-204ENST00000561568 TCERG1O14776 1098 aaKnown RBP20.97■□□□□ 0.95
USB1-204ENST00000561568 SGIP1Q9BQI5 828 aa20.97■□□□□ 0.95
USB1-204ENST00000561568 PHAXQ9H814 394 aaKnown RBP20.97■□□□□ 0.95
USB1-204ENST00000561568 DDX58O95786 925 aaKnown RBP20.96■□□□□ 0.95
USB1-204ENST00000561568 GIGYF2Q6Y7W6 1299 aaKnown RBP20.96■□□□□ 0.95
USB1-204ENST00000561568 PLBD2Q8NHP8 589 aa20.96■□□□□ 0.95
USB1-204ENST00000561568 PARP3Q9Y6F1 533 aa20.96■□□□□ 0.95
USB1-204ENST00000561568 MMP10P09238 476 aa20.95■□□□□ 0.94
USB1-204ENST00000561568 HLFQ16534 295 aa20.95■□□□□ 0.94
USB1-204ENST00000561568 ALDH1L2Q3SY69 923 aa20.95■□□□□ 0.94
USB1-204ENST00000561568 SETDB2Q96T68 719 aa20.95■□□□□ 0.94
USB1-204ENST00000561568 ZBTB3Q9H5J0 574 aa20.95■□□□□ 0.94
USB1-204ENST00000561568 NFIXQ14938 502 aa20.94■□□□□ 0.94
USB1-204ENST00000561568 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
USB1-204ENST00000561568 HSP90AB3PQ58FF7 597 aa20.93■□□□□ 0.94
USB1-204ENST00000561568 TBC1D9BQ66K14 1250 aa20.93■□□□□ 0.94
USB1-204ENST00000561568 RIC3Q7Z5B4 369 aa20.93■□□□□ 0.94
USB1-204ENST00000561568 PPP1R1BQ9UD71 204 aaPredicted RBP20.93■□□□□ 0.94
USB1-204ENST00000561568 BICDL1Q6ZP65 573 aa20.92■□□□□ 0.94
USB1-204ENST00000561568 C4AP0C0L4 1744 aa20.92■□□□□ 0.94
USB1-204ENST00000561568 FLIIQ13045 1269 aa20.91■□□□□ 0.94
USB1-204ENST00000561568 TCIRG1Q13488 830 aa20.91■□□□□ 0.94
USB1-204ENST00000561568 KSR2Q6VAB6 950 aa20.91■□□□□ 0.94
USB1-204ENST00000561568 G2E3Q7L622 706 aa20.91■□□□□ 0.94
USB1-204ENST00000561568 SSH1Q8WYL5 1049 aa20.91■□□□□ 0.94
USB1-204ENST00000561568 NIP7Q9Y221 180 aaKnown RBP eCLIP20.91■□□□□ 0.94
USB1-204ENST00000561568 POLRMTO00411 1230 aaKnown RBP20.9■□□□□ 0.94
USB1-204ENST00000561568 SERPINB2P05120 415 aa20.9■□□□□ 0.94
USB1-204ENST00000561568 MRPL50Q8N5N7 158 aaKnown RBP20.9■□□□□ 0.94
USB1-204ENST00000561568 ZNF34Q8IZ26 560 aa20.89■□□□□ 0.93
USB1-204ENST00000561568 PI4KAP2A4QPH2 592 aa20.88■□□□□ 0.93
USB1-204ENST00000561568 RARSP54136 660 aaKnown RBP20.88■□□□□ 0.93
USB1-204ENST00000561568 BRPF1P55201 1214 aaPredicted RBP20.88■□□□□ 0.93
USB1-204ENST00000561568 DDR1Q08345 913 aa20.88■□□□□ 0.93
USB1-204ENST00000561568 FKBP5Q13451 457 aaPredicted RBP20.88■□□□□ 0.93
USB1-204ENST00000561568 TPTE2Q6XPS3 522 aa20.88■□□□□ 0.93
USB1-204ENST00000561568 PI4KAP1Q8N8J0 262 aa20.88■□□□□ 0.93
USB1-204ENST00000561568 CACNA1FO60840 1977 aa20.88■□□□□ 0.93
USB1-204ENST00000561568 COL24A1Q17RW2 1714 aa20.87■□□□□ 0.93
USB1-204ENST00000561568 PARP10Q53GL7 1025 aa20.87■□□□□ 0.93
USB1-204ENST00000561568 SMC4Q9NTJ3 1288 aa20.87■□□□□ 0.93
USB1-204ENST00000561568 MAP3K2Q9Y2U5 619 aa20.87■□□□□ 0.93
USB1-204ENST00000561568 CARMIL3Q8ND23 1372 aa20.86■□□□□ 0.93
USB1-204ENST00000561568 TRIM28Q13263 835 aaKnown RBP20.86■□□□□ 0.93
USB1-204ENST00000561568 PPP1R42Q7Z4L9 355 aa20.86■□□□□ 0.93
USB1-204ENST00000561568 METTL22Q9BUU2 404 aaPredicted RBP20.86■□□□□ 0.93
USB1-204ENST00000561568 CD2APQ9Y5K6 639 aa20.86■□□□□ 0.93
USB1-204ENST00000561568 NPHP1O15259 732 aa20.85■□□□□ 0.93
USB1-204ENST00000561568 GPTP24298 496 aa20.85■□□□□ 0.93
USB1-204ENST00000561568 NEXNQ0ZGT2 675 aa20.85■□□□□ 0.93
USB1-204ENST00000561568 NBPF5PQ86XG9 351 aaPredicted RBP20.85■□□□□ 0.93
USB1-204ENST00000561568 NYXQ9GZU5 481 aa20.85■□□□□ 0.93
USB1-204ENST00000561568 ATP10DQ9P241 1426 aa20.85■□□□□ 0.93
USB1-204ENST00000561568 PTPRCP08575 1304 aa20.84■□□□□ 0.93
USB1-204ENST00000561568 GTF2E1P29083 439 aaPredicted RBP20.84■□□□□ 0.93
USB1-204ENST00000561568 ISCA1Q9BUE6 129 aa20.84■□□□□ 0.93
USB1-204ENST00000561568 BCL2L13Q9BXK5 485 aa20.84■□□□□ 0.93
USB1-204ENST00000561568 DNAAF4Q8WXU2 420 aa20.83■□□□□ 0.93
USB1-204ENST00000561568 MYD88Q99836 296 aa20.83■□□□□ 0.93
USB1-204ENST00000561568 SCN7AQ01118 1682 aa20.83■□□□□ 0.92
USB1-204ENST00000561568 BCORQ6W2J9 1755 aa20.82■□□□□ 0.92
USB1-204ENST00000561568 LRP5O75197 1615 aa20.82■□□□□ 0.92
USB1-204ENST00000561568 ATP5J2-PTCD1G3V325 749 aa20.82■□□□□ 0.92
USB1-204ENST00000561568 IPO8O15397 1037 aaKnown RBP20.82■□□□□ 0.92
USB1-204ENST00000561568 SUSD4Q5VX71 490 aa20.82■□□□□ 0.92
USB1-204ENST00000561568 NLRP10Q86W26 655 aa20.82■□□□□ 0.92
USB1-204ENST00000561568 CNBD1Q8NA66 436 aa20.82■□□□□ 0.92
USB1-204ENST00000561568 UTP14AQ9BVJ6 771 aaKnown RBP20.82■□□□□ 0.92
USB1-204ENST00000561568 FHDC1Q9C0D6 1143 aaPredicted RBP20.82■□□□□ 0.92
USB1-204ENST00000561568 NUP98P52948 1817 aa20.82■□□□□ 0.92
USB1-204ENST00000561568 FAM177BA6PVY3 158 aa20.81■□□□□ 0.92
USB1-204ENST00000561568 TGFB2P61812 414 aa20.81■□□□□ 0.92
USB1-204ENST00000561568 ST5P78524 1137 aa20.81■□□□□ 0.92
USB1-204ENST00000561568 CCDC191Q8NCU4 936 aa20.81■□□□□ 0.92
USB1-204ENST00000561568 ARHGAP45Q92619 1136 aa20.81■□□□□ 0.92
USB1-204ENST00000561568 SYT17Q9BSW7 474 aa20.81■□□□□ 0.92
USB1-204ENST00000561568 NOB1Q9ULX3 412 aaKnown RBP20.81■□□□□ 0.92
USB1-204ENST00000561568 ADCY9O60503 1353 aa20.81■□□□□ 0.92
USB1-204ENST00000561568 UBN2Q6ZU65 1347 aa20.8■□□□□ 0.92
USB1-204ENST00000561568 PRR5LQ6MZQ0 368 aa20.8■□□□□ 0.92
USB1-204ENST00000561568 KLHL34Q8N239 644 aa20.8■□□□□ 0.92
USB1-204ENST00000561568 BRIP1Q9BX63 1249 aa20.8■□□□□ 0.92
USB1-204ENST00000561568 RNF123Q5XPI4 1314 aa20.79■□□□□ 0.92
USB1-204ENST00000561568 KIF16BQ96L93 1317 aa20.79■□□□□ 0.92
USB1-204ENST00000561568 BCAR3O75815 825 aa20.79■□□□□ 0.92
USB1-204ENST00000561568 LINS1Q8NG48 757 aa20.79■□□□□ 0.92
USB1-204ENST00000561568 TRMT112Q9UI30 125 aaKnown RBP20.79■□□□□ 0.92
USB1-204ENST00000561568 PDZRN3Q9UPQ7 1066 aa20.79■□□□□ 0.92
USB1-204ENST00000561568 IBTKQ9P2D0 1353 aaPredicted RBP20.78■□□□□ 0.92
USB1-204ENST00000561568 F6X3S4 739 aa20.78■□□□□ 0.92
USB1-204ENST00000561568 PDE6BP35913 854 aa20.78■□□□□ 0.92
USB1-204ENST00000561568 API5Q9BZZ5 524 aaKnown RBP20.78■□□□□ 0.92
USB1-204ENST00000561568 CWC25Q9NXE8 425 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms