RNA–Protein interactions for RNA: ENST00000561559.1

AC008074.3-201, humanhuman

BASIC

Gene AC008074.3, Length 1,907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008074.3-201ENST00000561559 C16orf71Q8IYS4 520 aaPredicted RBP13.43□□□□□ -0.26
AC008074.3-201ENST00000561559 NBPF5PQ86XG9 351 aaPredicted RBP13.43□□□□□ -0.26
AC008074.3-201ENST00000561559 COL11A2P13942 1736 aaPredicted RBP13.42□□□□□ -0.26
AC008074.3-201ENST00000561559 SBF1O95248 1867 aa13.42□□□□□ -0.26
AC008074.3-201ENST00000561559 LAMB4A4D0S4 1761 aa13.42□□□□□ -0.26
AC008074.3-201ENST00000561559 NFKBIEO00221 500 aa13.42□□□□□ -0.26
AC008074.3-201ENST00000561559 STYK1Q6J9G0 422 aa13.42□□□□□ -0.26
AC008074.3-201ENST00000561559 RBM46Q8TBY0 533 aaKnown RBP13.42□□□□□ -0.26
AC008074.3-201ENST00000561559 KDM3BQ7LBC6 1761 aa13.42□□□□□ -0.26
AC008074.3-201ENST00000561559 DLG5Q8TDM6 1919 aa13.42□□□□□ -0.26
AC008074.3-201ENST00000561559 C21orf2O43822 256 aa13.41□□□□□ -0.26
AC008074.3-201ENST00000561559 PRELPP51888 382 aa13.41□□□□□ -0.26
AC008074.3-201ENST00000561559 CNKSR1Q969H4 720 aa13.41□□□□□ -0.26
AC008074.3-201ENST00000561559 THUMPD2Q9BTF0 503 aaKnown RBP13.41□□□□□ -0.26
AC008074.3-201ENST00000561559 TNRC6CQ9HCJ0 1690 aaKnown RBP13.41□□□□□ -0.26
AC008074.3-201ENST00000561559 SRGNP10124 158 aa13.41□□□□□ -0.26
AC008074.3-201ENST00000561559 APLP1P51693 650 aa13.41□□□□□ -0.26
AC008074.3-201ENST00000561559 RRAGCQ9HB90 399 aa13.41□□□□□ -0.26
AC008074.3-201ENST00000561559 ZNF219Q9P2Y4 722 aaPredicted RBP13.41□□□□□ -0.26
AC008074.3-201ENST00000561559 HOXD11P31277 338 aaPredicted RBP13.4□□□□□ -0.26
AC008074.3-201ENST00000561559 EIF4A1P60842 406 aaKnown RBP13.4□□□□□ -0.26
AC008074.3-201ENST00000561559 MASTLQ96GX5 879 aa13.4□□□□□ -0.26
AC008074.3-201ENST00000561559 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.26
AC008074.3-201ENST00000561559 TPTE2Q6XPS3 522 aa13.39□□□□□ -0.27
AC008074.3-201ENST00000561559 GLTPD2A6NH11 291 aa13.39□□□□□ -0.27
AC008074.3-201ENST00000561559 FSTL1Q12841 308 aa13.39□□□□□ -0.27
AC008074.3-201ENST00000561559 PRPF40BQ6NWY9 871 aaKnown RBP13.39□□□□□ -0.27
AC008074.3-201ENST00000561559 TIAM2Q8IVF5 1701 aa13.38□□□□□ -0.27
AC008074.3-201ENST00000561559 HLFQ16534 295 aa13.38□□□□□ -0.27
AC008074.3-201ENST00000561559 SOGA3Q5TF21 947 aa13.38□□□□□ -0.27
AC008074.3-201ENST00000561559 LTBP3Q9NS15 1303 aa13.38□□□□□ -0.27
AC008074.3-201ENST00000561559 NPR1P16066 1061 aa13.37□□□□□ -0.27
AC008074.3-201ENST00000561559 DDX10Q13206 875 aaKnown RBP13.37□□□□□ -0.27
AC008074.3-201ENST00000561559 NGEFQ8N5V2 710 aa13.37□□□□□ -0.27
AC008074.3-201ENST00000561559 TAOK3Q9H2K8 898 aa13.37□□□□□ -0.27
AC008074.3-201ENST00000561559 MYBBP1AQ9BQG0 1328 aaKnown RBP13.37□□□□□ -0.27
AC008074.3-201ENST00000561559 KLRG2A4D1S0 409 aaPredicted RBP13.37□□□□□ -0.27
AC008074.3-201ENST00000561559 FAM177BA6PVY3 158 aa13.37□□□□□ -0.27
AC008074.3-201ENST00000561559 ERVV-1B6SEH8 477 aa13.37□□□□□ -0.27
AC008074.3-201ENST00000561559 RIPK4P57078 832 aa13.37□□□□□ -0.27
AC008074.3-201ENST00000561559 KIF6Q6ZMV9 814 aa13.37□□□□□ -0.27
AC008074.3-201ENST00000561559 TSPYL4Q9UJ04 414 aa13.37□□□□□ -0.27
AC008074.3-201ENST00000561559 RRP7AQ9Y3A4 280 aaKnown RBP13.37□□□□□ -0.27
AC008074.3-201ENST00000561559 ARFGEF2Q9Y6D5 1785 aa13.36□□□□□ -0.27
AC008074.3-201ENST00000561559 VEGFAP15692 232 aaPredicted RBP13.36□□□□□ -0.27
AC008074.3-201ENST00000561559 LMOD3Q0VAK6 560 aa13.36□□□□□ -0.27
AC008074.3-201ENST00000561559 ERFEQ4G0M1 354 aa13.36□□□□□ -0.27
AC008074.3-201ENST00000561559 RNF39Q9H2S5 420 aa13.36□□□□□ -0.27
AC008074.3-201ENST00000561559 ERBB4Q15303 1308 aa13.36□□□□□ -0.27
AC008074.3-201ENST00000561559 MAP3K15Q6ZN16 1313 aa13.36□□□□□ -0.27
AC008074.3-201ENST00000561559 SLX4Q8IY92 1834 aa13.35□□□□□ -0.27
AC008074.3-201ENST00000561559 FER1L6Q2WGJ9 1857 aa13.35□□□□□ -0.27
AC008074.3-201ENST00000561559 MYL6BP14649 208 aa13.35□□□□□ -0.27
AC008074.3-201ENST00000561559 GTF2E1P29083 439 aaPredicted RBP13.35□□□□□ -0.27
AC008074.3-201ENST00000561559 DPY19L2Q6NUT2 758 aa13.35□□□□□ -0.27
AC008074.3-201ENST00000561559 SMC1BQ8NDV3 1235 aa13.35□□□□□ -0.27
AC008074.3-201ENST00000561559 ZEB1P37275 1124 aaPredicted RBP13.35□□□□□ -0.27
AC008074.3-201ENST00000561559 TMPOP42166 694 aaKnown RBP13.35□□□□□ -0.27
AC008074.3-201ENST00000561559 TTLL7Q6ZT98 887 aa13.35□□□□□ -0.27
AC008074.3-201ENST00000561559 CNKSR2Q8WXI2 1034 aa13.35□□□□□ -0.27
AC008074.3-201ENST00000561559 NYXQ9GZU5 481 aa13.35□□□□□ -0.27
AC008074.3-201ENST00000561559 BABAM1Q9NWV8 329 aa13.35□□□□□ -0.27
AC008074.3-201ENST00000561559 CCDC93Q567U6 631 aa13.34□□□□□ -0.27
AC008074.3-201ENST00000561559 C7orf43Q8WVR3 580 aa13.34□□□□□ -0.27
AC008074.3-201ENST00000561559 ZBTB3Q9H5J0 574 aa13.33□□□□□ -0.28
AC008074.3-201ENST00000561559 CACNA1SQ13698 1873 aa13.33□□□□□ -0.28
AC008074.3-201ENST00000561559 CCDC88AQ3V6T2 1871 aa13.33□□□□□ -0.28
AC008074.3-201ENST00000561559 CEP350Q5VT06 3117 aa13.33□□□□□ -0.28
AC008074.3-201ENST00000561559 IBTKQ9P2D0 1353 aaPredicted RBP13.33□□□□□ -0.28
AC008074.3-201ENST00000561559 DNAJC5GQ8N7S2 189 aa13.33□□□□□ -0.28
AC008074.3-201ENST00000561559 WDR90Q96KV7 1748 aa13.33□□□□□ -0.28
AC008074.3-201ENST00000561559 ABCC12Q96J65 1359 aa13.32□□□□□ -0.28
AC008074.3-201ENST00000561559 ALDH1B1P30837 517 aa13.32□□□□□ -0.28
AC008074.3-201ENST00000561559 WDR43Q15061 677 aaKnown RBP eCLIP13.32□□□□□ -0.28
AC008074.3-201ENST00000561559 CCDC146Q8IYE0 955 aa13.32□□□□□ -0.28
AC008074.3-201ENST00000561559 DICER1Q9UPY3 1922 aaKnown RBP13.31□□□□□ -0.28
AC008074.3-201ENST00000561559 GPTP24298 496 aa13.31□□□□□ -0.28
AC008074.3-201ENST00000561559 CRY2Q49AN0 593 aa13.31□□□□□ -0.28
AC008074.3-201ENST00000561559 NUTM1Q86Y26 1132 aa13.31□□□□□ -0.28
AC008074.3-201ENST00000561559 RUNDC1Q96C34 613 aa13.31□□□□□ -0.28
AC008074.3-201ENST00000561559 RIC1Q4ADV7 1423 aa13.31□□□□□ -0.28
AC008074.3-201ENST00000561559 NUP98P52948 1817 aa13.31□□□□□ -0.28
AC008074.3-201ENST00000561559 UBN2Q6ZU65 1347 aa13.31□□□□□ -0.28
AC008074.3-201ENST00000561559 POTECB2RU33 542 aa13.31□□□□□ -0.28
AC008074.3-201ENST00000561559 EIF2S2P20042 333 aaKnown RBP13.31□□□□□ -0.28
AC008074.3-201ENST00000561559 FKBP4Q02790 459 aaKnown RBP eCLIP13.31□□□□□ -0.28
AC008074.3-201ENST00000561559 GIGYF2Q6Y7W6 1299 aaKnown RBP13.31□□□□□ -0.28
AC008074.3-201ENST00000561559 ZNF34Q8IZ26 560 aa13.31□□□□□ -0.28
AC008074.3-201ENST00000561559 RTKN2Q8IZC4 609 aa13.31□□□□□ -0.28
AC008074.3-201ENST00000561559 PDIA6Q15084 440 aa13.3□□□□□ -0.28
AC008074.3-201ENST00000561559 NEUROD2Q15784 382 aa13.3□□□□□ -0.28
AC008074.3-201ENST00000561559 SUSD4Q5VX71 490 aa13.3□□□□□ -0.28
AC008074.3-201ENST00000561559 LRP10Q7Z4F1 713 aa13.3□□□□□ -0.28
AC008074.3-201ENST00000561559 HTRA3P83110 453 aa13.29□□□□□ -0.28
AC008074.3-201ENST00000561559 RPGRQ92834 1020 aaKnown RBP13.29□□□□□ -0.28
AC008074.3-201ENST00000561559 DDNO94850 711 aaPredicted RBP13.29□□□□□ -0.28
AC008074.3-201ENST00000561559 PROSER3Q2NL68 480 aa13.29□□□□□ -0.28
AC008074.3-201ENST00000561559 PARP10Q53GL7 1025 aa13.29□□□□□ -0.28
AC008074.3-201ENST00000561559 OLFM4Q6UX06 510 aa13.29□□□□□ -0.28
AC008074.3-201ENST00000561559 PPP1R42Q7Z4L9 355 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms