RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 CDC42BPGQ6DT37 1551 aa19.59■□□□□ 0.73
AP4E1-205ENST00000561393 IFIT5Q13325 482 aaKnown RBP19.59■□□□□ 0.73
AP4E1-205ENST00000561393 PDRG1Q9NUG6 133 aa19.59■□□□□ 0.73
AP4E1-205ENST00000561393 ADGRL3Q9HAR2 1447 aa19.59■□□□□ 0.73
AP4E1-205ENST00000561393 KIF24Q5T7B8 1368 aa19.59■□□□□ 0.73
AP4E1-205ENST00000561393 A1BGP04217 495 aa19.59■□□□□ 0.73
AP4E1-205ENST00000561393 PCDH11XQ9BZA7 1347 aa19.58■□□□□ 0.73
AP4E1-205ENST00000561393 PCDH11YQ9BZA8 1340 aa19.58■□□□□ 0.73
AP4E1-205ENST00000561393 MSNP26038 577 aaKnown RBP19.58■□□□□ 0.73
AP4E1-205ENST00000561393 SF3A1Q15459 793 aaKnown RBP19.58■□□□□ 0.73
AP4E1-205ENST00000561393 USP31Q70CQ4 1352 aa19.58■□□□□ 0.73
AP4E1-205ENST00000561393 TNPO1Q92973 898 aaKnown RBP19.58■□□□□ 0.72
AP4E1-205ENST00000561393 TBC1D2BQ9UPU7 963 aa19.58■□□□□ 0.72
AP4E1-205ENST00000561393 EVI5LQ96CN4 794 aa19.58■□□□□ 0.72
AP4E1-205ENST00000561393 PTCH1Q13635 1447 aa19.57■□□□□ 0.72
AP4E1-205ENST00000561393 IFIT1P09914 478 aaKnown RBP19.57■□□□□ 0.72
AP4E1-205ENST00000561393 GSPT1P15170 499 aaKnown RBP19.57■□□□□ 0.72
AP4E1-205ENST00000561393 NAP1L5Q96NT1 182 aaPredicted RBP19.57■□□□□ 0.72
AP4E1-205ENST00000561393 SNRKQ9NRH2 765 aa19.57■□□□□ 0.72
AP4E1-205ENST00000561393 OVOS2A0A0J9YW53 1432 aa19.57■□□□□ 0.72
AP4E1-205ENST00000561393 OVOS2Q6IE36 1432 aa19.57■□□□□ 0.72
AP4E1-205ENST00000561393 AEBP2Q6ZN18 517 aaPredicted RBP19.57■□□□□ 0.72
AP4E1-205ENST00000561393 TEX13AQ9BXU3 409 aaPredicted RBP19.57■□□□□ 0.72
AP4E1-205ENST00000561393 IQSEC2Q5JU85 1478 aa19.56■□□□□ 0.72
AP4E1-205ENST00000561393 FIBPO43427 364 aa19.56■□□□□ 0.72
AP4E1-205ENST00000561393 PHF14O94880 888 aa19.56■□□□□ 0.72
AP4E1-205ENST00000561393 DNAJC5Q9H3Z4 198 aa19.56■□□□□ 0.72
AP4E1-205ENST00000561393 BRPF3Q9ULD4 1205 aa19.56■□□□□ 0.72
AP4E1-205ENST00000561393 ZNF335Q9H4Z2 1342 aaPredicted RBP19.56■□□□□ 0.72
AP4E1-205ENST00000561393 MYO5BQ9ULV0 1848 aa19.56■□□□□ 0.72
AP4E1-205ENST00000561393 MYOM1P52179 1685 aa19.56■□□□□ 0.72
AP4E1-205ENST00000561393 DDX46Q7L014 1031 aaKnown RBP19.55■□□□□ 0.72
AP4E1-205ENST00000561393 SUCLG2Q96I99 432 aa19.55■□□□□ 0.72
AP4E1-205ENST00000561393 USP26Q9BXU7 913 aa19.55■□□□□ 0.72
AP4E1-205ENST00000561393 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.54■□□□□ 0.72
AP4E1-205ENST00000561393 GOLIM4O00461 696 aa19.54■□□□□ 0.72
AP4E1-205ENST00000561393 IDH1O75874 414 aaKnown RBP19.54■□□□□ 0.72
AP4E1-205ENST00000561393 CHMLP26374 656 aa19.54■□□□□ 0.72
AP4E1-205ENST00000561393 CPLX2Q6PUV4 134 aaKnown RBP19.54■□□□□ 0.72
AP4E1-205ENST00000561393 DRC7Q8IY82 874 aa19.54■□□□□ 0.72
AP4E1-205ENST00000561393 LDHAL6AQ6ZMR3 332 aa19.54■□□□□ 0.72
AP4E1-205ENST00000561393 NFXL1Q6ZNB6 911 aa19.54■□□□□ 0.72
AP4E1-205ENST00000561393 BEND3Q5T5X7 828 aa19.54■□□□□ 0.72
AP4E1-205ENST00000561393 CCDC83Q8IWF9 413 aa19.54■□□□□ 0.72
AP4E1-205ENST00000561393 METTL22Q9BUU2 404 aaPredicted RBP19.54■□□□□ 0.72
AP4E1-205ENST00000561393 KDM4AO75164 1064 aa19.53■□□□□ 0.72
AP4E1-205ENST00000561393 RBM25P49756 843 aaKnown RBP19.53■□□□□ 0.72
AP4E1-205ENST00000561393 TMX4Q9H1E5 349 aaPredicted RBP19.53■□□□□ 0.72
AP4E1-205ENST00000561393 G3V3G9 751 aa19.53■□□□□ 0.72
AP4E1-205ENST00000561393 DDB1Q16531 1140 aa19.53■□□□□ 0.72
AP4E1-205ENST00000561393 DCAF8Q5TAQ9 597 aa19.53■□□□□ 0.72
AP4E1-205ENST00000561393 SYNE3Q6ZMZ3 975 aa19.53■□□□□ 0.72
AP4E1-205ENST00000561393 STK11IPQ8N1F8 1099 aa19.52■□□□□ 0.72
AP4E1-205ENST00000561393 RNF214Q8ND24 703 aa19.52■□□□□ 0.72
AP4E1-205ENST00000561393 BICD2Q8TD16 824 aa19.52■□□□□ 0.72
AP4E1-205ENST00000561393 HSP90AB3PQ58FF7 597 aa19.52■□□□□ 0.71
AP4E1-205ENST00000561393 SNX21Q969T3 373 aa19.52■□□□□ 0.71
AP4E1-205ENST00000561393 WDR33Q9C0J8 1336 aaKnown RBP19.51■□□□□ 0.71
AP4E1-205ENST00000561393 SSH3Q8TE77 659 aa19.51■□□□□ 0.71
AP4E1-205ENST00000561393 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.51■□□□□ 0.71
AP4E1-205ENST00000561393 AKAP2Q9Y2D5 859 aa19.51■□□□□ 0.71
AP4E1-205ENST00000561393 UBAP1LF5GYI3 381 aa19.51■□□□□ 0.71
AP4E1-205ENST00000561393 LMTK3Q96Q04 1460 aa19.5■□□□□ 0.71
AP4E1-205ENST00000561393 GCKRQ14397 625 aa19.5■□□□□ 0.71
AP4E1-205ENST00000561393 LARP1BQ659C4 914 aaKnown RBP19.5■□□□□ 0.71
AP4E1-205ENST00000561393 BRINP3Q76B58 766 aa19.5■□□□□ 0.71
AP4E1-205ENST00000561393 CHMP4CQ96CF2 233 aa19.5■□□□□ 0.71
AP4E1-205ENST00000561393 TMX3Q96JJ7 454 aa19.5■□□□□ 0.71
AP4E1-205ENST00000561393 TCEANC2Q96MN5 208 aa19.5■□□□□ 0.71
AP4E1-205ENST00000561393 RRP12Q5JTH9 1297 aaKnown RBP19.49■□□□□ 0.71
AP4E1-205ENST00000561393 ANKRD18BA2A2Z9 1011 aa19.49■□□□□ 0.71
AP4E1-205ENST00000561393 TFCP2Q12800 502 aa19.49■□□□□ 0.71
AP4E1-205ENST00000561393 PDCP20941 246 aa19.49■□□□□ 0.71
AP4E1-205ENST00000561393 MRE11P49959 708 aa19.49■□□□□ 0.71
AP4E1-205ENST00000561393 ANKRD1Q15327 319 aa19.49■□□□□ 0.71
AP4E1-205ENST00000561393 DNAJC10Q8IXB1 793 aa19.49■□□□□ 0.71
AP4E1-205ENST00000561393 PLBD2Q8NHP8 589 aa19.49■□□□□ 0.71
AP4E1-205ENST00000561393 FERMT3Q86UX7 667 aa19.48■□□□□ 0.71
AP4E1-205ENST00000561393 TOM1O60784 492 aa19.48■□□□□ 0.71
AP4E1-205ENST00000561393 FAM89AQ96GI7 184 aa19.48■□□□□ 0.71
AP4E1-205ENST00000561393 IGHMBP2P38935 993 aaKnown RBP19.48■□□□□ 0.71
AP4E1-205ENST00000561393 C8orf37Q96NL8 207 aa19.48■□□□□ 0.71
AP4E1-205ENST00000561393 DIP2AQ14689 1571 aa19.48■□□□□ 0.71
AP4E1-205ENST00000561393 LIMCH1Q9UPQ0 1083 aa19.48■□□□□ 0.71
AP4E1-205ENST00000561393 TTC41PQ6P2S7 1318 aa19.47■□□□□ 0.71
AP4E1-205ENST00000561393 ATP6V1AP38606 617 aa19.47■□□□□ 0.71
AP4E1-205ENST00000561393 KRT32Q14532 448 aa19.47■□□□□ 0.71
AP4E1-205ENST00000561393 NEURL1BA8MQ27 555 aa19.47■□□□□ 0.71
AP4E1-205ENST00000561393 MBD3O95983 291 aa19.47■□□□□ 0.71
AP4E1-205ENST00000561393 CEBPZQ03701 1054 aaKnown RBP19.47■□□□□ 0.71
AP4E1-205ENST00000561393 DDX11Q96FC9 970 aa19.47■□□□□ 0.71
AP4E1-205ENST00000561393 ZSCAN31Q96LW9 406 aaPredicted RBP19.47■□□□□ 0.71
AP4E1-205ENST00000561393 ABCF2Q9UG63 623 aa19.46■□□□□ 0.71
AP4E1-205ENST00000561393 COL3A1P02461 1466 aaPredicted RBP19.46■□□□□ 0.71
AP4E1-205ENST00000561393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.46■□□□□ 0.711e-6■■■■□ 22.6
AP4E1-205ENST00000561393 TIMM10P62072 90 aa19.46■□□□□ 0.71
AP4E1-205ENST00000561393 AKAP17AQ02040 695 aaKnown RBP19.46■□□□□ 0.71
AP4E1-205ENST00000561393 ZGPATQ8N5A5 531 aaKnown RBP19.46■□□□□ 0.71
AP4E1-205ENST00000561393 SPATA31A3Q5VYP0 1347 aa19.45■□□□□ 0.7
AP4E1-205ENST00000561393 NMIQ13287 307 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms