RNA–Protein interactions for RNA: ENST00000561061.5

ZEB1-221, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 970 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-221ENST00000561061 ARFGEF2Q9Y6D5 1785 aa9.28□□□□□ -0.92
ZEB1-221ENST00000561061 POTEB3A0JP26 581 aa9.28□□□□□ -0.92
ZEB1-221ENST00000561061 PHKG2P15735 406 aa9.28□□□□□ -0.92
ZEB1-221ENST00000561061 TGFB2P61812 414 aa9.28□□□□□ -0.92
ZEB1-221ENST00000561061 ARSIQ5FYB1 569 aa9.28□□□□□ -0.92
ZEB1-221ENST00000561061 POTEBQ6S5H4 581 aa9.28□□□□□ -0.92
ZEB1-221ENST00000561061 CFAP44Q96MT7 982 aa9.28□□□□□ -0.92
ZEB1-221ENST00000561061 ZSWIM6Q9HCJ5 1215 aa9.28□□□□□ -0.92
ZEB1-221ENST00000561061 NMRK2Q9NPI5 230 aa9.28□□□□□ -0.92
ZEB1-221ENST00000561061 BCS1LQ9Y276 419 aa9.28□□□□□ -0.92
ZEB1-221ENST00000561061 WASHC2AQ641Q2 1341 aa9.28□□□□□ -0.92
ZEB1-221ENST00000561061 COL11A2P13942 1736 aaPredicted RBP9.28□□□□□ -0.92
ZEB1-221ENST00000561061 A0A0G2JLW4 131 aa9.27□□□□□ -0.93
ZEB1-221ENST00000561061 FAM205CA6NFA0 338 aa9.27□□□□□ -0.93
ZEB1-221ENST00000561061 SLC4A9Q96Q91 983 aa9.27□□□□□ -0.93
ZEB1-221ENST00000561061 EYA1Q99502 592 aa9.27□□□□□ -0.93
ZEB1-221ENST00000561061 CARD14Q9BXL6 1004 aa9.27□□□□□ -0.93
ZEB1-221ENST00000561061 ATG3Q9NT62 314 aa9.27□□□□□ -0.93
ZEB1-221ENST00000561061 KDM6AO15550 1401 aaPredicted RBP9.27□□□□□ -0.93
ZEB1-221ENST00000561061 CNTNAP4Q9C0A0 1308 aa9.27□□□□□ -0.93
ZEB1-221ENST00000561061 PPM1GO15355 546 aaPredicted RBP9.26□□□□□ -0.93
ZEB1-221ENST00000561061 GYS1P13807 737 aa9.26□□□□□ -0.93
ZEB1-221ENST00000561061 DPEP1P16444 411 aa9.26□□□□□ -0.93
ZEB1-221ENST00000561061 ARHGAP27Q6ZUM4 889 aa9.26□□□□□ -0.93
ZEB1-221ENST00000561061 IFNL2Q8IZJ0 200 aa9.26□□□□□ -0.93
ZEB1-221ENST00000561061 NLGN1Q8N2Q7 840 aa9.26□□□□□ -0.93
ZEB1-221ENST00000561061 RBM46Q8TBY0 533 aaKnown RBP9.26□□□□□ -0.93
ZEB1-221ENST00000561061 CCDC87Q9NVE4 849 aa9.26□□□□□ -0.93
ZEB1-221ENST00000561061 RTCBQ9Y3I0 505 aaKnown RBP9.26□□□□□ -0.93
ZEB1-221ENST00000561061 SIPA1L3O60292 1781 aaPredicted RBP9.25□□□□□ -0.93
ZEB1-221ENST00000561061 FCHSD2O94868 740 aa9.25□□□□□ -0.93
ZEB1-221ENST00000561061 SLC34A2O95436 690 aa9.25□□□□□ -0.93
ZEB1-221ENST00000561061 TRAPPC3LQ5T215 181 aa9.25□□□□□ -0.93
ZEB1-221ENST00000561061 CDAN1Q8IWY9 1227 aa9.25□□□□□ -0.93
ZEB1-221ENST00000561061 ARHGEF1Q92888 912 aaKnown RBP9.25□□□□□ -0.93
ZEB1-221ENST00000561061 HS3ST6Q96QI5 342 aa9.25□□□□□ -0.93
ZEB1-221ENST00000561061 SCN7AQ01118 1682 aa9.25□□□□□ -0.93
ZEB1-221ENST00000561061 KCNA3P22001 575 aa9.24□□□□□ -0.93
ZEB1-221ENST00000561061 PDE4AP27815 886 aa9.24□□□□□ -0.93
ZEB1-221ENST00000561061 HTRA3P83110 453 aa9.24□□□□□ -0.93
ZEB1-221ENST00000561061 CDCA8Q53HL2 280 aa9.24□□□□□ -0.93
ZEB1-221ENST00000561061 PPP1R15BQ5SWA1 713 aa9.24□□□□□ -0.93
ZEB1-221ENST00000561061 RC3H1Q5TC82 1133 aaKnown RBP9.24□□□□□ -0.93
ZEB1-221ENST00000561061 C9orf131Q5VYM1 1079 aa9.24□□□□□ -0.93
ZEB1-221ENST00000561061 KLRG1Q96E93 195 aa9.24□□□□□ -0.93
ZEB1-221ENST00000561061 LARP6Q9BRS8 491 aaKnown RBP9.24□□□□□ -0.93
ZEB1-221ENST00000561061 PCDHGA4Q9Y5G9 962 aa9.24□□□□□ -0.93
ZEB1-221ENST00000561061 PARP3Q9Y6F1 533 aa9.24□□□□□ -0.93
ZEB1-221ENST00000561061 BCORQ6W2J9 1755 aa9.23□□□□□ -0.93
ZEB1-221ENST00000561061 ERVV-2B6SEH9 535 aa9.23□□□□□ -0.93
ZEB1-221ENST00000561061 RPS6KA4O75676 772 aa9.23□□□□□ -0.93
ZEB1-221ENST00000561061 RFC4P35249 363 aa9.23□□□□□ -0.93
ZEB1-221ENST00000561061 EIF4A2Q14240 407 aaKnown RBP9.23□□□□□ -0.93
ZEB1-221ENST00000561061 C16orf71Q8IYS4 520 aaPredicted RBP9.23□□□□□ -0.93
ZEB1-221ENST00000561061 JMYQ8N9B5 988 aa9.23□□□□□ -0.93
ZEB1-221ENST00000561061 DCAF5Q96JK2 942 aa9.23□□□□□ -0.93
ZEB1-221ENST00000561061 POLKQ9UBT6 870 aa9.23□□□□□ -0.93
ZEB1-221ENST00000561061 SLX4Q8IY92 1834 aa9.22□□□□□ -0.93
ZEB1-221ENST00000561061 NUDT7P0C024 238 aa9.22□□□□□ -0.93
ZEB1-221ENST00000561061 FSTL1Q12841 308 aa9.22□□□□□ -0.93
ZEB1-221ENST00000561061 COL13A1Q5TAT6 717 aaPredicted RBP9.22□□□□□ -0.93
ZEB1-221ENST00000561061 RNF181Q9P0P0 153 aa9.22□□□□□ -0.93
ZEB1-221ENST00000561061 SRP68Q9UHB9 627 aaKnown RBP9.22□□□□□ -0.93
ZEB1-221ENST00000561061 KDM2BQ8NHM5 1336 aa9.22□□□□□ -0.93
ZEB1-221ENST00000561061 USP42Q9H9J4 1324 aaKnown RBP9.22□□□□□ -0.93
ZEB1-221ENST00000561061 SCN4AP35499 1836 aa9.21□□□□□ -0.93
ZEB1-221ENST00000561061 MRC1P22897 1456 aa9.21□□□□□ -0.93
ZEB1-221ENST00000561061 HSP90AB1P08238 724 aaKnown RBP9.21□□□□□ -0.94
ZEB1-221ENST00000561061 CRKLP46109 303 aaKnown RBP9.21□□□□□ -0.94
ZEB1-221ENST00000561061 DDR1Q08345 913 aa9.21□□□□□ -0.94
ZEB1-221ENST00000561061 MFSD10Q14728 455 aa9.21□□□□□ -0.94
ZEB1-221ENST00000561061 DALRD3Q5D0E6 543 aaKnown RBP9.21□□□□□ -0.94
ZEB1-221ENST00000561061 PIM2Q9P1W9 311 aa9.21□□□□□ -0.94
ZEB1-221ENST00000561061 VARS2Q5ST30 1063 aaKnown RBP9.2□□□□□ -0.94
ZEB1-221ENST00000561061 ZNF530Q6P9A1 599 aaPredicted RBP9.2□□□□□ -0.94
ZEB1-221ENST00000561061 PTCD2Q8WV60 388 aaKnown RBP9.2□□□□□ -0.94
ZEB1-221ENST00000561061 DDX27Q96GQ7 796 aaKnown RBP9.2□□□□□ -0.94
ZEB1-221ENST00000561061 POLRMTO00411 1230 aaKnown RBP9.19□□□□□ -0.94
ZEB1-221ENST00000561061 PTCD1O75127 700 aaKnown RBP9.19□□□□□ -0.94
ZEB1-221ENST00000561061 CHRNA5P30532 468 aa9.19□□□□□ -0.94
ZEB1-221ENST00000561061 CABP4P57796 275 aa9.19□□□□□ -0.94
ZEB1-221ENST00000561061 RRAGCQ9HB90 399 aa9.19□□□□□ -0.94
ZEB1-221ENST00000561061 PCDH10Q9P2E7 1040 aa9.19□□□□□ -0.94
ZEB1-221ENST00000561061 TRPM7Q96QT4 1865 aa9.19□□□□□ -0.94
ZEB1-221ENST00000561061 TNNT2P45379 298 aaPredicted RBP9.18□□□□□ -0.94
ZEB1-221ENST00000561061 RASSF7Q02833 373 aa9.18□□□□□ -0.94
ZEB1-221ENST00000561061 PLEKHO1Q53GL0 409 aaPredicted RBP9.18□□□□□ -0.94
ZEB1-221ENST00000561061 SMC1BQ8NDV3 1235 aa9.18□□□□□ -0.94
ZEB1-221ENST00000561061 ZC3H4Q9UPT8 1303 aaKnown RBP9.18□□□□□ -0.94
ZEB1-221ENST00000561061 ZNF316A6NFI3 1004 aaPredicted RBP9.17□□□□□ -0.94
ZEB1-221ENST00000561061 AEBP1Q8IUX7 1158 aa9.17□□□□□ -0.94
ZEB1-221ENST00000561061 TNS4Q8IZW8 715 aa9.17□□□□□ -0.94
ZEB1-221ENST00000561061 OXER1Q8TDS5 423 aa9.17□□□□□ -0.94
ZEB1-221ENST00000561061 COL15A1P39059 1388 aa9.16□□□□□ -0.94
ZEB1-221ENST00000561061 SOS1Q07889 1333 aaPredicted RBP9.16□□□□□ -0.94
ZEB1-221ENST00000561061 TM4SF1P30408 202 aa9.16□□□□□ -0.94
ZEB1-221ENST00000561061 MTHFSP49914 203 aa9.16□□□□□ -0.94
ZEB1-221ENST00000561061 PRELPP51888 382 aa9.16□□□□□ -0.94
ZEB1-221ENST00000561061 AMOTQ4VCS5 1084 aa9.16□□□□□ -0.94
ZEB1-221ENST00000561061 C1orf141Q5JVX7 400 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms