RNA–Protein interactions for RNA: ENST00000561003.5

CSHL1-210, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2 BASIC

Gene CSHL1, Length 880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-210ENST00000561003 ARFGEF1Q9Y6D6 1849 aa13.76□□□□□ -0.21
CSHL1-210ENST00000561003 KLRG2A4D1S0 409 aaPredicted RBP13.75□□□□□ -0.21
CSHL1-210ENST00000561003 NEFMP07197 916 aa13.75□□□□□ -0.21
CSHL1-210ENST00000561003 CC2D2BQ6DHV5 1058 aa13.75□□□□□ -0.21
CSHL1-210ENST00000561003 CCDC24Q8N4L8 307 aa13.75□□□□□ -0.21
CSHL1-210ENST00000561003 L3MBTL3Q96JM7 780 aaPredicted RBP13.75□□□□□ -0.21
CSHL1-210ENST00000561003 USP16Q9Y5T5 823 aa13.75□□□□□ -0.21
CSHL1-210ENST00000561003 CAPN15O75808 1086 aa13.74□□□□□ -0.21
CSHL1-210ENST00000561003 PRKAR2BP31323 418 aa13.74□□□□□ -0.21
CSHL1-210ENST00000561003 C7orf43Q8WVR3 580 aa13.74□□□□□ -0.21
CSHL1-210ENST00000561003 PHACTR3Q96KR7 559 aa13.74□□□□□ -0.21
CSHL1-210ENST00000561003 CEMIPQ8WUJ3 1361 aa13.73□□□□□ -0.21
CSHL1-210ENST00000561003 U2AF1L5P0DN76 240 aaPredicted RBP13.73□□□□□ -0.21
CSHL1-210ENST00000561003 U2AF1Q01081 240 aaKnown RBP eCLIP13.73□□□□□ -0.21
CSHL1-210ENST00000561003 FKBP4Q02790 459 aaKnown RBP eCLIP13.73□□□□□ -0.21
CSHL1-210ENST00000561003 CNGB1Q14028 1251 aaPredicted RBP13.73□□□□□ -0.21
CSHL1-210ENST00000561003 TAF7Q15545 349 aaPredicted RBP13.73□□□□□ -0.21
CSHL1-210ENST00000561003 PNISRQ8TF01 805 aaKnown RBP13.73□□□□□ -0.21
CSHL1-210ENST00000561003 AIDAQ96BJ3 306 aa13.73□□□□□ -0.21
CSHL1-210ENST00000561003 TAF1DQ9H5J8 278 aaPredicted RBP13.73□□□□□ -0.21
CSHL1-210ENST00000561003 HACL1Q9UJ83 578 aa13.73□□□□□ -0.21
CSHL1-210ENST00000561003 NIP7Q9Y221 180 aaKnown RBP eCLIP13.73□□□□□ -0.21
CSHL1-210ENST00000561003 PCNTO95613 3336 aa13.73□□□□□ -0.21
CSHL1-210ENST00000561003 TMEM88BA6NKF7 163 aa13.72□□□□□ -0.21
CSHL1-210ENST00000561003 JDP2Q8WYK2 163 aa13.72□□□□□ -0.21
CSHL1-210ENST00000561003 NYXQ9GZU5 481 aa13.72□□□□□ -0.21
CSHL1-210ENST00000561003 RSPH6AQ9H0K4 717 aa13.72□□□□□ -0.21
CSHL1-210ENST00000561003 TMX4Q9H1E5 349 aaPredicted RBP13.72□□□□□ -0.21
CSHL1-210ENST00000561003 PRDM10Q9NQV6 1147 aa13.72□□□□□ -0.21
CSHL1-210ENST00000561003 MKRN1Q9UHC7 482 aaKnown RBP13.72□□□□□ -0.21
CSHL1-210ENST00000561003 CLEC11AQ9Y240 323 aa13.72□□□□□ -0.21
CSHL1-210ENST00000561003 BRCA1P38398 1863 aaKnown RBP13.72□□□□□ -0.21
CSHL1-210ENST00000561003 KCNQ3O43525 872 aa13.71□□□□□ -0.21
CSHL1-210ENST00000561003 SCN11AQ9UI33 1791 aa13.71□□□□□ -0.22
CSHL1-210ENST00000561003 TJP1Q07157 1748 aa13.7□□□□□ -0.22
CSHL1-210ENST00000561003 WDR90Q96KV7 1748 aa13.7□□□□□ -0.22
CSHL1-210ENST00000561003 ERVV-1B6SEH8 477 aa13.7□□□□□ -0.22
CSHL1-210ENST00000561003 CTCFP49711 727 aaPredicted RBP13.7□□□□□ -0.22
CSHL1-210ENST00000561003 PNNQ9H307 717 aaKnown RBP13.7□□□□□ -0.22
CSHL1-210ENST00000561003 ITGBL1O95965 494 aaPredicted RBP13.69□□□□□ -0.22
CSHL1-210ENST00000561003 EPHX2P34913 555 aa13.69□□□□□ -0.22
CSHL1-210ENST00000561003 EAPPQ56P03 285 aaPredicted RBP13.69□□□□□ -0.22
CSHL1-210ENST00000561003 GPC2Q8N158 579 aa13.69□□□□□ -0.22
CSHL1-210ENST00000561003 SYNE4Q8N205 404 aa13.69□□□□□ -0.22
CSHL1-210ENST00000561003 PSMD1Q99460 953 aa13.69□□□□□ -0.22
CSHL1-210ENST00000561003 TNRC6CQ9HCJ0 1690 aaKnown RBP13.69□□□□□ -0.22
CSHL1-210ENST00000561003 FZD9O00144 591 aa13.68□□□□□ -0.22
CSHL1-210ENST00000561003 IARSP41252 1262 aaKnown RBP13.68□□□□□ -0.22
CSHL1-210ENST00000561003 EIF6P56537 245 aaKnown RBP13.68□□□□□ -0.22
CSHL1-210ENST00000561003 MAP2K1Q02750 393 aaPredicted RBP13.68□□□□□ -0.22
CSHL1-210ENST00000561003 DEFB115Q30KQ5 88 aa13.68□□□□□ -0.22
CSHL1-210ENST00000561003 MCM10Q7L590 875 aa13.68□□□□□ -0.22
CSHL1-210ENST00000561003 CNTROBQ8N137 903 aa13.68□□□□□ -0.22
CSHL1-210ENST00000561003 ZNF277Q9NRM2 450 aaPredicted RBP13.68□□□□□ -0.22
CSHL1-210ENST00000561003 PASKQ96RG2 1323 aa13.67□□□□□ -0.22
CSHL1-210ENST00000561003 ADAMTS7Q9UKP4 1686 aa13.67□□□□□ -0.22
CSHL1-210ENST00000561003 RPGRQ92834 1020 aaKnown RBP13.67□□□□□ -0.22
CSHL1-210ENST00000561003 VPS33BQ9H267 617 aa13.67□□□□□ -0.22
CSHL1-210ENST00000561003 CNTNAP1P78357 1384 aa13.67□□□□□ -0.22
CSHL1-210ENST00000561003 NRXN2Q9P2S2 1712 aa13.67□□□□□ -0.22
CSHL1-210ENST00000561003 SBF1O95248 1867 aa13.66□□□□□ -0.22
CSHL1-210ENST00000561003 FAM177BA6PVY3 158 aa13.66□□□□□ -0.22
CSHL1-210ENST00000561003 NBPF26B4DH59 902 aa13.66□□□□□ -0.22
CSHL1-210ENST00000561003 POTEIP0CG38 1075 aa13.66□□□□□ -0.22
CSHL1-210ENST00000561003 POTEJP0CG39 1038 aa13.66□□□□□ -0.22
CSHL1-210ENST00000561003 LMOD1P29536 600 aaPredicted RBP13.66□□□□□ -0.22
CSHL1-210ENST00000561003 VEGFBP49765 207 aa13.66□□□□□ -0.22
CSHL1-210ENST00000561003 NBPF10Q6P3W6 841 aaKnown RBP13.66□□□□□ -0.22
CSHL1-210ENST00000561003 KIF6Q6ZMV9 814 aa13.66□□□□□ -0.22
CSHL1-210ENST00000561003 NBPF15Q8N660 670 aa13.66□□□□□ -0.22
CSHL1-210ENST00000561003 PPP2R1AP30153 589 aa13.65□□□□□ -0.22
CSHL1-210ENST00000561003 HOXA10P31260 410 aaPredicted RBP13.65□□□□□ -0.22
CSHL1-210ENST00000561003 PIP4K2AP48426 406 aaPredicted RBP13.65□□□□□ -0.22
CSHL1-210ENST00000561003 CRY2Q49AN0 593 aa13.65□□□□□ -0.22
CSHL1-210ENST00000561003 POTEDQ86YR6 584 aa13.65□□□□□ -0.22
CSHL1-210ENST00000561003 RBM17Q96I25 401 aaKnown RBP13.65□□□□□ -0.22
CSHL1-210ENST00000561003 WBP1LQ9NX94 342 aa13.65□□□□□ -0.22
CSHL1-210ENST00000561003 PRAMEF22A3QJZ6 481 aa13.64□□□□□ -0.23
CSHL1-210ENST00000561003 FOXN1O15353 648 aa13.64□□□□□ -0.23
CSHL1-210ENST00000561003 ECE1P42892 770 aa13.64□□□□□ -0.23
CSHL1-210ENST00000561003 HLFQ16534 295 aa13.64□□□□□ -0.23
CSHL1-210ENST00000561003 CRAMP1Q96RY5 1269 aa13.64□□□□□ -0.23
CSHL1-210ENST00000561003 BEGAINQ9BUH8 593 aa13.64□□□□□ -0.23
CSHL1-210ENST00000561003 RASSF10A6NK89 507 aa13.63□□□□□ -0.23
CSHL1-210ENST00000561003 DCTN1Q14203 1278 aa13.63□□□□□ -0.23
CSHL1-210ENST00000561003 USP50Q70EL3 339 aaPredicted RBP13.63□□□□□ -0.23
CSHL1-210ENST00000561003 PPP1R42Q7Z4L9 355 aa13.63□□□□□ -0.23
CSHL1-210ENST00000561003 NGEFQ8N5V2 710 aa13.63□□□□□ -0.23
CSHL1-210ENST00000561003 NLRP3Q96P20 1036 aa13.63□□□□□ -0.23
CSHL1-210ENST00000561003 RRP7AQ9Y3A4 280 aaKnown RBP13.63□□□□□ -0.23
CSHL1-210ENST00000561003 MAP3K15Q6ZN16 1313 aa13.63□□□□□ -0.23
CSHL1-210ENST00000561003 PARP10Q53GL7 1025 aa13.62□□□□□ -0.23
CSHL1-210ENST00000561003 MAP1SQ66K74 1059 aaPredicted RBP13.62□□□□□ -0.23
CSHL1-210ENST00000561003 LARGE2Q8N3Y3 721 aa13.62□□□□□ -0.23
CSHL1-210ENST00000561003 SUPT20HQ8NEM7 779 aa13.62□□□□□ -0.23
CSHL1-210ENST00000561003 MIS18AQ9NYP9 233 aa13.62□□□□□ -0.23
CSHL1-210ENST00000561003 ABT1Q9ULW3 272 aaKnown RBP13.62□□□□□ -0.23
CSHL1-210ENST00000561003 GJA3Q9Y6H8 435 aa13.62□□□□□ -0.23
CSHL1-210ENST00000561003 AFDNP55196 1824 aaKnown RBP13.62□□□□□ -0.23
CSHL1-210ENST00000561003 DDX21Q9NR30 783 aaKnown RBP eCLIP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms