RNA–Protein interactions for RNA: ENST00000561000.1

LINC01220-202, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 5

Gene LINC01220, Length 159 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-202ENST00000561000 SCN7AQ01118 1682 aa24.66■■□□□ 1.54
LINC01220-202ENST00000561000 FAM177BA6PVY3 158 aa24.66■■□□□ 1.54
LINC01220-202ENST00000561000 APLP1P51693 650 aa24.66■■□□□ 1.54
LINC01220-202ENST00000561000 RALBP1Q15311 655 aa24.66■■□□□ 1.54
LINC01220-202ENST00000561000 CNKSR1Q969H4 720 aa24.66■■□□□ 1.54
LINC01220-202ENST00000561000 SRGNP10124 158 aa24.65■■□□□ 1.54
LINC01220-202ENST00000561000 DDX10Q13206 875 aaKnown RBP24.65■■□□□ 1.54
LINC01220-202ENST00000561000 STYK1Q6J9G0 422 aa24.65■■□□□ 1.54
LINC01220-202ENST00000561000 RRP7AQ9Y3A4 280 aaKnown RBP24.65■■□□□ 1.54
LINC01220-202ENST00000561000 EIF4A1P60842 406 aaKnown RBP24.64■■□□□ 1.54
LINC01220-202ENST00000561000 HLFQ16534 295 aa24.64■■□□□ 1.54
LINC01220-202ENST00000561000 TPTE2Q6XPS3 522 aa24.64■■□□□ 1.54
LINC01220-202ENST00000561000 MASTLQ96GX5 879 aa24.64■■□□□ 1.54
LINC01220-202ENST00000561000 ZC3H4Q9UPT8 1303 aaKnown RBP24.63■■□□□ 1.53
LINC01220-202ENST00000561000 GLTPD2A6NH11 291 aa24.63■■□□□ 1.53
LINC01220-202ENST00000561000 PRPF40BQ6NWY9 871 aaKnown RBP24.62■■□□□ 1.53
LINC01220-202ENST00000561000 GTF2E1P29083 439 aaPredicted RBP24.61■■□□□ 1.53
LINC01220-202ENST00000561000 RIPK4P57078 832 aa24.61■■□□□ 1.53
LINC01220-202ENST00000561000 RGL2O15211 777 aa24.6■■□□□ 1.53
LINC01220-202ENST00000561000 MYL6BP14649 208 aa24.6■■□□□ 1.53
LINC01220-202ENST00000561000 FSTL1Q12841 308 aa24.6■■□□□ 1.53
LINC01220-202ENST00000561000 ERFEQ4G0M1 354 aa24.6■■□□□ 1.53
LINC01220-202ENST00000561000 CEP350Q5VT06 3117 aa24.59■■□□□ 1.53
LINC01220-202ENST00000561000 DPY19L2Q6NUT2 758 aa24.59■■□□□ 1.53
LINC01220-202ENST00000561000 TAOK3Q9H2K8 898 aa24.59■■□□□ 1.53
LINC01220-202ENST00000561000 TSPYL4Q9UJ04 414 aa24.59■■□□□ 1.53
LINC01220-202ENST00000561000 ANKRD31Q8N7Z5 1873 aa24.59■■□□□ 1.53
LINC01220-202ENST00000561000 DLEC1Q9Y238 1755 aa24.59■■□□□ 1.53
LINC01220-202ENST00000561000 VEGFAP15692 232 aaPredicted RBP24.58■■□□□ 1.53
LINC01220-202ENST00000561000 NPR1P16066 1061 aa24.58■■□□□ 1.53
LINC01220-202ENST00000561000 SBF1O95248 1867 aa24.58■■□□□ 1.52
LINC01220-202ENST00000561000 SOGA3Q5TF21 947 aa24.57■■□□□ 1.52
LINC01220-202ENST00000561000 KIF6Q6ZMV9 814 aa24.57■■□□□ 1.52
LINC01220-202ENST00000561000 TTLL7Q6ZT98 887 aa24.57■■□□□ 1.52
LINC01220-202ENST00000561000 ERVV-1B6SEH8 477 aa24.56■■□□□ 1.52
LINC01220-202ENST00000561000 BCORQ6W2J9 1755 aa24.55■■□□□ 1.52
LINC01220-202ENST00000561000 KLRG2A4D1S0 409 aaPredicted RBP24.55■■□□□ 1.52
LINC01220-202ENST00000561000 TMPOP42166 694 aaKnown RBP24.55■■□□□ 1.52
LINC01220-202ENST00000561000 SMC1BQ8NDV3 1235 aa24.55■■□□□ 1.52
LINC01220-202ENST00000561000 ZBTB3Q9H5J0 574 aa24.55■■□□□ 1.52
LINC01220-202ENST00000561000 MAP3K15Q6ZN16 1313 aa24.55■■□□□ 1.52
LINC01220-202ENST00000561000 EIF2S2P20042 333 aaKnown RBP24.54■■□□□ 1.52
LINC01220-202ENST00000561000 HTRA3P83110 453 aa24.54■■□□□ 1.52
LINC01220-202ENST00000561000 NEUROD2Q15784 382 aa24.54■■□□□ 1.52
LINC01220-202ENST00000561000 MYBBP1AQ9BQG0 1328 aaKnown RBP24.54■■□□□ 1.52
LINC01220-202ENST00000561000 LTBP3Q9NS15 1303 aa24.54■■□□□ 1.52
LINC01220-202ENST00000561000 COL11A2P13942 1736 aaPredicted RBP24.53■■□□□ 1.52
LINC01220-202ENST00000561000 NUTM1Q86Y26 1132 aa24.53■■□□□ 1.52
LINC01220-202ENST00000561000 CCDC146Q8IYE0 955 aa24.53■■□□□ 1.52
LINC01220-202ENST00000561000 DNAJC5GQ8N7S2 189 aa24.53■■□□□ 1.52
LINC01220-202ENST00000561000 C7orf43Q8WVR3 580 aa24.53■■□□□ 1.52
LINC01220-202ENST00000561000 NYXQ9GZU5 481 aa24.53■■□□□ 1.52
LINC01220-202ENST00000561000 GPTP24298 496 aa24.52■■□□□ 1.52
LINC01220-202ENST00000561000 LMOD3Q0VAK6 560 aa24.52■■□□□ 1.52
LINC01220-202ENST00000561000 CCDC93Q567U6 631 aa24.52■■□□□ 1.52
LINC01220-202ENST00000561000 DLG5Q8TDM6 1919 aa24.51■■□□□ 1.51
LINC01220-202ENST00000561000 POTECB2RU33 542 aa24.5■■□□□ 1.51
LINC01220-202ENST00000561000 ALDH1B1P30837 517 aa24.5■■□□□ 1.51
LINC01220-202ENST00000561000 OLFM4Q6UX06 510 aa24.5■■□□□ 1.51
LINC01220-202ENST00000561000 SLX4Q8IY92 1834 aa24.49■■□□□ 1.51
LINC01220-202ENST00000561000 WDR43Q15061 677 aaKnown RBP eCLIP24.49■■□□□ 1.51
LINC01220-202ENST00000561000 BABAM1Q9NWV8 329 aa24.49■■□□□ 1.51
LINC01220-202ENST00000561000 DDNO94850 711 aaPredicted RBP24.48■■□□□ 1.51
LINC01220-202ENST00000561000 ERBB4Q15303 1308 aa24.48■■□□□ 1.51
LINC01220-202ENST00000561000 SUSD4Q5VX71 490 aa24.48■■□□□ 1.51
LINC01220-202ENST00000561000 KDM3BQ7LBC6 1761 aa24.48■■□□□ 1.51
LINC01220-202ENST00000561000 FKBP4Q02790 459 aaKnown RBP eCLIP24.47■■□□□ 1.51
LINC01220-202ENST00000561000 GIGYF2Q6Y7W6 1299 aaKnown RBP24.47■■□□□ 1.51
LINC01220-202ENST00000561000 RTKN2Q8IZC4 609 aa24.47■■□□□ 1.51
LINC01220-202ENST00000561000 NECTIN2Q92692 538 aa24.47■■□□□ 1.51
LINC01220-202ENST00000561000 ZNF277Q9NRM2 450 aaPredicted RBP24.47■■□□□ 1.51
LINC01220-202ENST00000561000 LAS1LQ9Y4W2 734 aaKnown RBP24.47■■□□□ 1.51
LINC01220-202ENST00000561000 TNRC6CQ9HCJ0 1690 aaKnown RBP24.46■■□□□ 1.51
LINC01220-202ENST00000561000 ABCC12Q96J65 1359 aa24.46■■□□□ 1.51
LINC01220-202ENST00000561000 UBN2Q6ZU65 1347 aa24.46■■□□□ 1.51
LINC01220-202ENST00000561000 ANXA1P04083 346 aa24.46■■□□□ 1.51
LINC01220-202ENST00000561000 PDIA6Q15084 440 aa24.46■■□□□ 1.51
LINC01220-202ENST00000561000 ZNF34Q8IZ26 560 aa24.46■■□□□ 1.51
LINC01220-202ENST00000561000 RUNDC1Q96C34 613 aa24.46■■□□□ 1.51
LINC01220-202ENST00000561000 PROSER3Q2NL68 480 aa24.45■■□□□ 1.5
LINC01220-202ENST00000561000 LAMB4A4D0S4 1761 aa24.44■■□□□ 1.5
LINC01220-202ENST00000561000 CRY2Q49AN0 593 aa24.44■■□□□ 1.5
LINC01220-202ENST00000561000 RPGRQ92834 1020 aaKnown RBP24.44■■□□□ 1.5
LINC01220-202ENST00000561000 ADAMTS8Q9UP79 889 aa24.44■■□□□ 1.5
LINC01220-202ENST00000561000 FER1L6Q2WGJ9 1857 aa24.43■■□□□ 1.5
LINC01220-202ENST00000561000 AIMP1Q12904 312 aaKnown RBP24.43■■□□□ 1.5
LINC01220-202ENST00000561000 LRP10Q7Z4F1 713 aa24.43■■□□□ 1.5
LINC01220-202ENST00000561000 PPP1R42Q7Z4L9 355 aa24.43■■□□□ 1.5
LINC01220-202ENST00000561000 SYNE4Q8N205 404 aa24.43■■□□□ 1.5
LINC01220-202ENST00000561000 KLRG1Q96E93 195 aa24.43■■□□□ 1.5
LINC01220-202ENST00000561000 CCDC88AQ3V6T2 1871 aa24.43■■□□□ 1.5
LINC01220-202ENST00000561000 TIAM2Q8IVF5 1701 aa24.42■■□□□ 1.5
LINC01220-202ENST00000561000 TRIM35Q9UPQ4 493 aa24.42■■□□□ 1.5
LINC01220-202ENST00000561000 ZNF316A6NFI3 1004 aaPredicted RBP24.41■■□□□ 1.5
LINC01220-202ENST00000561000 CHL1O00533 1208 aa24.41■■□□□ 1.5
LINC01220-202ENST00000561000 NTSR2O95665 410 aa24.41■■□□□ 1.5
LINC01220-202ENST00000561000 KRT24Q2M2I5 525 aa24.41■■□□□ 1.5
LINC01220-202ENST00000561000 PARP10Q53GL7 1025 aa24.41■■□□□ 1.5
LINC01220-202ENST00000561000 COPS6Q7L5N1 327 aa24.41■■□□□ 1.5
LINC01220-202ENST00000561000 TCERG1O14776 1098 aaKnown RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms