RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 RNF135Q8IUD6 432 aa6.62□□□□□ -1.35
HERC1-211ENST00000560983 ACDQ96AP0 544 aa6.62□□□□□ -1.35
HERC1-211ENST00000560983 SCARF2Q96GP6 870 aaPredicted RBP6.62□□□□□ -1.35
HERC1-211ENST00000560983 ESF1Q9H501 851 aaKnown RBP6.62□□□□□ -1.35
HERC1-211ENST00000560983 GDPD2Q9HCC8 539 aa6.62□□□□□ -1.35
HERC1-211ENST00000560983 TCOF1Q13428 1488 aaKnown RBP6.61□□□□□ -1.35
HERC1-211ENST00000560983 PLEKHD1A6NEE1 506 aa6.61□□□□□ -1.35
HERC1-211ENST00000560983 SOX11P35716 441 aa6.61□□□□□ -1.35
HERC1-211ENST00000560983 MAP7D1Q3KQU3 841 aa6.61□□□□□ -1.35
HERC1-211ENST00000560983 SLFNL1Q499Z3 407 aa6.61□□□□□ -1.35
HERC1-211ENST00000560983 ZNF295-AS1Q8N0V1 137 aa6.61□□□□□ -1.35
HERC1-211ENST00000560983 AFAP1Q8N556 730 aa6.61□□□□□ -1.35
HERC1-211ENST00000560983 TRERF1Q96PN7 1200 aa6.61□□□□□ -1.35
HERC1-211ENST00000560983 DNMT3AQ9Y6K1 912 aaPredicted RBP6.61□□□□□ -1.35
HERC1-211ENST00000560983 PTPRKQ15262 1439 aa6.6□□□□□ -1.35
HERC1-211ENST00000560983 SUPT5HO00267 1087 aaKnown RBP6.6□□□□□ -1.35
HERC1-211ENST00000560983 STAU1O95793 577 aaKnown RBP6.6□□□□□ -1.35
HERC1-211ENST00000560983 BCRP11274 1271 aa6.6□□□□□ -1.35
HERC1-211ENST00000560983 MAP3K10Q02779 954 aa6.6□□□□□ -1.35
HERC1-211ENST00000560983 RHBDD1Q8TEB9 315 aa6.6□□□□□ -1.35
HERC1-211ENST00000560983 SIRT1Q96EB6 747 aa6.6□□□□□ -1.35
HERC1-211ENST00000560983 CRISPLD1Q9H336 500 aa6.6□□□□□ -1.35
HERC1-211ENST00000560983 NDFIP2Q9NV92 336 aa6.6□□□□□ -1.35
HERC1-211ENST00000560983 ZMYM3Q14202 1370 aa6.59□□□□□ -1.35
HERC1-211ENST00000560983 MX2P20592 715 aa6.59□□□□□ -1.35
HERC1-211ENST00000560983 MSX1P28360 303 aa6.59□□□□□ -1.35
HERC1-211ENST00000560983 IRS1P35568 1242 aa6.59□□□□□ -1.35
HERC1-211ENST00000560983 MARSP56192 900 aaKnown RBP6.59□□□□□ -1.35
HERC1-211ENST00000560983 GNASQ5JWF2 1037 aa6.59□□□□□ -1.35
HERC1-211ENST00000560983 FAM9AQ8IZU1 332 aaPredicted RBP6.59□□□□□ -1.35
HERC1-211ENST00000560983 ENAMQ9NRM1 1142 aa6.59□□□□□ -1.35
HERC1-211ENST00000560983 PLA2R1Q13018 1463 aa6.59□□□□□ -1.36
HERC1-211ENST00000560983 SHANK2Q9UPX8 1470 aa6.59□□□□□ -1.36
HERC1-211ENST00000560983 NPATQ14207 1427 aa6.59□□□□□ -1.36
HERC1-211ENST00000560983 OIP5O43482 229 aa6.58□□□□□ -1.36
HERC1-211ENST00000560983 INHAP05111 366 aa6.58□□□□□ -1.36
HERC1-211ENST00000560983 ABL2P42684 1182 aa6.58□□□□□ -1.36
HERC1-211ENST00000560983 PHKA2P46019 1235 aa6.58□□□□□ -1.36
HERC1-211ENST00000560983 MAP2K3P46734 347 aa6.58□□□□□ -1.36
HERC1-211ENST00000560983 PLPP7Q8NBV4 271 aa6.58□□□□□ -1.36
HERC1-211ENST00000560983 COG6Q9Y2V7 657 aa6.58□□□□□ -1.36
HERC1-211ENST00000560983 PLCH2O75038 1416 aa6.58□□□□□ -1.36
HERC1-211ENST00000560983 CPS1P31327 1500 aa6.57□□□□□ -1.36
HERC1-211ENST00000560983 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.57□□□□□ -1.36
HERC1-211ENST00000560983 GDF10P55107 478 aa6.57□□□□□ -1.36
HERC1-211ENST00000560983 MTFR1Q15390 333 aa6.57□□□□□ -1.36
HERC1-211ENST00000560983 TLR1Q15399 786 aa6.57□□□□□ -1.36
HERC1-211ENST00000560983 OXLD1Q5BKU9 147 aa6.57□□□□□ -1.36
HERC1-211ENST00000560983 TMEM214Q6NUQ4 689 aaKnown RBP6.57□□□□□ -1.36
HERC1-211ENST00000560983 SLC4A9Q96Q91 983 aa6.57□□□□□ -1.36
HERC1-211ENST00000560983 DNAAF2Q9NVR5 837 aaKnown RBP6.57□□□□□ -1.36
HERC1-211ENST00000560983 C3P01024 1663 aa6.56□□□□□ -1.36
HERC1-211ENST00000560983 TMEM229AB2RXF0 380 aa6.56□□□□□ -1.36
HERC1-211ENST00000560983 ATP4AP20648 1035 aa6.56□□□□□ -1.36
HERC1-211ENST00000560983 FOXK2Q01167 660 aa6.56□□□□□ -1.36
HERC1-211ENST00000560983 EFCAB2Q5VUJ9 269 aa6.56□□□□□ -1.36
HERC1-211ENST00000560983 OXCT2Q9BYC2 517 aaPredicted RBP6.56□□□□□ -1.36
HERC1-211ENST00000560983 ALG2Q9H553 416 aa6.56□□□□□ -1.36
HERC1-211ENST00000560983 GPAMQ9HCL2 828 aa6.56□□□□□ -1.36
HERC1-211ENST00000560983 ATXN7L1Q9ULK2 861 aaPredicted RBP6.56□□□□□ -1.36
HERC1-211ENST00000560983 NSFL1CQ9UNZ2 370 aaKnown RBP6.56□□□□□ -1.36
HERC1-211ENST00000560983 IQSEC3Q9UPP2 1182 aaPredicted RBP6.56□□□□□ -1.36
HERC1-211ENST00000560983 PHF24Q9UPV7 400 aa6.56□□□□□ -1.36
HERC1-211ENST00000560983 PCDHGA11Q9Y5H2 935 aa6.56□□□□□ -1.36
HERC1-211ENST00000560983 CNTNAP5Q8WYK1 1306 aa6.55□□□□□ -1.36
HERC1-211ENST00000560983 NUP153P49790 1475 aaKnown RBP6.55□□□□□ -1.36
HERC1-211ENST00000560983 IGHA1P01876 353 aa6.55□□□□□ -1.36
HERC1-211ENST00000560983 SMTNP53814 917 aa6.55□□□□□ -1.36
HERC1-211ENST00000560983 SEMA3FQ13275 785 aa6.55□□□□□ -1.36
HERC1-211ENST00000560983 SUZ12Q15022 739 aaKnown RBP6.55□□□□□ -1.36
HERC1-211ENST00000560983 C1orf229Q6ZS94 237 aaPredicted RBP6.55□□□□□ -1.36
HERC1-211ENST00000560983 C1orf216Q8TAB5 229 aa6.55□□□□□ -1.36
HERC1-211ENST00000560983 KLRG1Q96E93 195 aa6.55□□□□□ -1.36
HERC1-211ENST00000560983 RUBCNLQ9H714 662 aa6.55□□□□□ -1.36
HERC1-211ENST00000560983 CNTLNQ9NXG0 1405 aa6.55□□□□□ -1.36
HERC1-211ENST00000560983 AGLP35573 1532 aa6.55□□□□□ -1.36
HERC1-211ENST00000560983 PHF20L1A8MW92 1017 aa6.54□□□□□ -1.36
HERC1-211ENST00000560983 PIK3CDO00329 1044 aa6.54□□□□□ -1.36
HERC1-211ENST00000560983 C2CD2LO14523 706 aa6.54□□□□□ -1.36
HERC1-211ENST00000560983 ITGB2P05107 769 aa6.54□□□□□ -1.36
HERC1-211ENST00000560983 GTF2E1P29083 439 aaPredicted RBP6.54□□□□□ -1.36
HERC1-211ENST00000560983 NFATC2IPQ8NCF5 419 aa6.54□□□□□ -1.36
HERC1-211ENST00000560983 HCN2Q9UL51 889 aa6.54□□□□□ -1.36
HERC1-211ENST00000560983 SHISA8B8ZZ34 492 aa6.53□□□□□ -1.36
HERC1-211ENST00000560983 BNIP3LO60238 219 aa6.53□□□□□ -1.36
HERC1-211ENST00000560983 LZTS3O60299 673 aaPredicted RBP6.53□□□□□ -1.36
HERC1-211ENST00000560983 CSB-PGBD3P0DP91 1061 aa6.53□□□□□ -1.36
HERC1-211ENST00000560983 HOXB4P17483 251 aaPredicted RBP6.53□□□□□ -1.36
HERC1-211ENST00000560983 EFHC2Q5JST6 749 aa6.53□□□□□ -1.36
HERC1-211ENST00000560983 PGBD3Q8N328 593 aa6.53□□□□□ -1.36
HERC1-211ENST00000560983 BEND7Q8N7W2 519 aaPredicted RBP6.53□□□□□ -1.36
HERC1-211ENST00000560983 GDF2Q9UK05 429 aaPredicted RBP6.53□□□□□ -1.36
HERC1-211ENST00000560983 A6NJY4 79 aa6.52□□□□□ -1.37
HERC1-211ENST00000560983 CDK2AP1O14519 115 aa6.52□□□□□ -1.37
HERC1-211ENST00000560983 PRKCSHP14314 528 aaPredicted RBP6.52□□□□□ -1.37
HERC1-211ENST00000560983 PLA2G4AP47712 749 aa6.52□□□□□ -1.37
HERC1-211ENST00000560983 NLRP8Q86W28 1048 aa6.52□□□□□ -1.37
HERC1-211ENST00000560983 NEDD1Q8NHV4 660 aa6.52□□□□□ -1.37
HERC1-211ENST00000560983 DCAF5Q96JK2 942 aa6.52□□□□□ -1.37
HERC1-211ENST00000560983 NIFKQ9BYG3 293 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms