RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 MYH14Q7Z406 1995 aaKnown RBP8.92□□□□□ -0.98
USP8-213ENST00000560885 SBF1O95248 1867 aa8.92□□□□□ -0.98
USP8-213ENST00000560885 TNRC6CQ9HCJ0 1690 aaKnown RBP8.92□□□□□ -0.98
USP8-213ENST00000560885 KDRP35968 1356 aa8.92□□□□□ -0.98
USP8-213ENST00000560885 PPM1GO15355 546 aaPredicted RBP8.92□□□□□ -0.98
USP8-213ENST00000560885 PHKG2P15735 406 aa8.92□□□□□ -0.98
USP8-213ENST00000560885 EYA1Q99502 592 aa8.92□□□□□ -0.98
USP8-213ENST00000560885 CARD14Q9BXL6 1004 aa8.92□□□□□ -0.98
USP8-213ENST00000560885 ATG3Q9NT62 314 aa8.92□□□□□ -0.98
USP8-213ENST00000560885 BCS1LQ9Y276 419 aa8.92□□□□□ -0.98
USP8-213ENST00000560885 A0A0G2JLW4 131 aa8.91□□□□□ -0.98
USP8-213ENST00000560885 RC3H1Q5TC82 1133 aaKnown RBP8.91□□□□□ -0.98
USP8-213ENST00000560885 CCDC87Q9NVE4 849 aa8.91□□□□□ -0.98
USP8-213ENST00000560885 STK24Q9Y6E0 443 aa8.91□□□□□ -0.98
USP8-213ENST00000560885 ERVV-2B6SEH9 535 aa8.9□□□□□ -0.98
USP8-213ENST00000560885 ARHGAP27Q6ZUM4 889 aa8.9□□□□□ -0.98
USP8-213ENST00000560885 RBM46Q8TBY0 533 aaKnown RBP8.9□□□□□ -0.98
USP8-213ENST00000560885 ARHGEF1Q92888 912 aaKnown RBP8.9□□□□□ -0.98
USP8-213ENST00000560885 PARP3Q9Y6F1 533 aa8.9□□□□□ -0.98
USP8-213ENST00000560885 CNTNAP4Q9C0A0 1308 aa8.89□□□□□ -0.99
USP8-213ENST00000560885 RPS6KA4O75676 772 aa8.89□□□□□ -0.99
USP8-213ENST00000560885 FCHSD2O94868 740 aa8.89□□□□□ -0.99
USP8-213ENST00000560885 HSP90AB1P08238 724 aaKnown RBP8.89□□□□□ -0.99
USP8-213ENST00000560885 GYS1P13807 737 aa8.89□□□□□ -0.99
USP8-213ENST00000560885 RFC4P35249 363 aa8.89□□□□□ -0.99
USP8-213ENST00000560885 C16orf71Q8IYS4 520 aaPredicted RBP8.89□□□□□ -0.99
USP8-213ENST00000560885 DCAF5Q96JK2 942 aa8.89□□□□□ -0.99
USP8-213ENST00000560885 SLC4A9Q96Q91 983 aa8.89□□□□□ -0.99
USP8-213ENST00000560885 NMRK2Q9NPI5 230 aa8.89□□□□□ -0.99
USP8-213ENST00000560885 POLKQ9UBT6 870 aa8.89□□□□□ -0.99
USP8-213ENST00000560885 VIRMAQ69YN4 1812 aaKnown RBP8.89□□□□□ -0.99
USP8-213ENST00000560885 SCN11AQ9UI33 1791 aa8.89□□□□□ -0.99
USP8-213ENST00000560885 TJP1Q07157 1748 aa8.88□□□□□ -0.99
USP8-213ENST00000560885 KDM2BQ8NHM5 1336 aa8.88□□□□□ -0.99
USP8-213ENST00000560885 DPEP1P16444 411 aa8.88□□□□□ -0.99
USP8-213ENST00000560885 KCNA3P22001 575 aa8.88□□□□□ -0.99
USP8-213ENST00000560885 FSTL1Q12841 308 aa8.88□□□□□ -0.99
USP8-213ENST00000560885 PTCD2Q8WV60 388 aaKnown RBP8.88□□□□□ -0.99
USP8-213ENST00000560885 PIM2Q9P1W9 311 aa8.88□□□□□ -0.99
USP8-213ENST00000560885 ADAMTS7Q9UKP4 1686 aa8.88□□□□□ -0.99
USP8-213ENST00000560885 CCDC88AQ3V6T2 1871 aa8.87□□□□□ -0.99
USP8-213ENST00000560885 DLEC1Q9Y238 1755 aa8.87□□□□□ -0.99
USP8-213ENST00000560885 EIF4A2Q14240 407 aaKnown RBP8.87□□□□□ -0.99
USP8-213ENST00000560885 PPP4R3BQ5MIZ7 849 aa8.87□□□□□ -0.99
USP8-213ENST00000560885 C9orf131Q5VYM1 1079 aa8.87□□□□□ -0.99
USP8-213ENST00000560885 JMYQ8N9B5 988 aa8.87□□□□□ -0.99
USP8-213ENST00000560885 AFDNP55196 1824 aaKnown RBP8.87□□□□□ -0.99
USP8-213ENST00000560885 KCPQ6ZWJ8 1503 aa8.86□□□□□ -0.99
USP8-213ENST00000560885 CABP4P57796 275 aa8.86□□□□□ -0.99
USP8-213ENST00000560885 AMOTQ4VCS5 1084 aa8.86□□□□□ -0.99
USP8-213ENST00000560885 PLEKHO1Q53GL0 409 aaPredicted RBP8.86□□□□□ -0.99
USP8-213ENST00000560885 DALRD3Q5D0E6 543 aaKnown RBP8.86□□□□□ -0.99
USP8-213ENST00000560885 KCTD12Q96CX2 325 aaKnown RBP8.86□□□□□ -0.99
USP8-213ENST00000560885 KLRG1Q96E93 195 aa8.86□□□□□ -0.99
USP8-213ENST00000560885 KDM6AO15550 1401 aaPredicted RBP8.86□□□□□ -0.99
USP8-213ENST00000560885 STK25O00506 426 aa8.85□□□□□ -0.99
USP8-213ENST00000560885 DMRTA1Q5VZB9 504 aa8.85□□□□□ -0.99
USP8-213ENST00000560885 TIAM2Q8IVF5 1701 aa8.85□□□□□ -0.99
USP8-213ENST00000560885 NRXN2Q9P2S2 1712 aa8.85□□□□□ -0.99
USP8-213ENST00000560885 USP42Q9H9J4 1324 aaKnown RBP8.84□□□□□ -0.99
USP8-213ENST00000560885 ZC3H4Q9UPT8 1303 aaKnown RBP8.84□□□□□ -0.99
USP8-213ENST00000560885 PTCD1O75127 700 aaKnown RBP8.84□□□□□ -0.99
USP8-213ENST00000560885 CRKLP46109 303 aaKnown RBP8.84□□□□□ -0.99
USP8-213ENST00000560885 MTHFSP49914 203 aa8.84□□□□□ -0.99
USP8-213ENST00000560885 ZNF530Q6P9A1 599 aaPredicted RBP8.84□□□□□ -0.99
USP8-213ENST00000560885 RRAGCQ9HB90 399 aa8.84□□□□□ -0.99
USP8-213ENST00000560885 RNF181Q9P0P0 153 aa8.84□□□□□ -0.99
USP8-213ENST00000560885 TM4SF1P30408 202 aa8.83□□□□□ -1
USP8-213ENST00000560885 TNNT2P45379 298 aaPredicted RBP8.83□□□□□ -1
USP8-213ENST00000560885 PSEN2P49810 448 aa8.83□□□□□ -1
USP8-213ENST00000560885 HTRA3P83110 453 aa8.83□□□□□ -1
USP8-213ENST00000560885 C1orf141Q5JVX7 400 aa8.83□□□□□ -1
USP8-213ENST00000560885 COL13A1Q5TAT6 717 aaPredicted RBP8.83□□□□□ -1
USP8-213ENST00000560885 NFATC2IPQ8NCF5 419 aa8.83□□□□□ -1
USP8-213ENST00000560885 DICER1Q9UPY3 1922 aaKnown RBP8.83□□□□□ -1
USP8-213ENST00000560885 POLRMTO00411 1230 aaKnown RBP8.82□□□□□ -1
USP8-213ENST00000560885 TBC1D12O60347 775 aa8.82□□□□□ -1
USP8-213ENST00000560885 DDR1Q08345 913 aa8.82□□□□□ -1
USP8-213ENST00000560885 SMC1BQ8NDV3 1235 aa8.82□□□□□ -1
USP8-213ENST00000560885 SRP68Q9UHB9 627 aaKnown RBP8.82□□□□□ -1
USP8-213ENST00000560885 ZPR1O75312 459 aa8.81□□□□□ -1
USP8-213ENST00000560885 CHRNA5P30532 468 aa8.81□□□□□ -1
USP8-213ENST00000560885 INTS5Q6P9B9 1019 aaKnown RBP8.81□□□□□ -1
USP8-213ENST00000560885 IRX2Q9BZI1 471 aaPredicted RBP8.81□□□□□ -1
USP8-213ENST00000560885 TIMELESSQ9UNS1 1208 aa8.81□□□□□ -1
USP8-213ENST00000560885 UBR2Q8IWV8 1755 aa8.81□□□□□ -1
USP8-213ENST00000560885 GLTPD2A6NH11 291 aa8.8□□□□□ -1
USP8-213ENST00000560885 VEGFAP15692 232 aaPredicted RBP8.8□□□□□ -1
USP8-213ENST00000560885 LMNB1P20700 586 aa8.8□□□□□ -1
USP8-213ENST00000560885 FOXK1P85037 733 aa8.8□□□□□ -1
USP8-213ENST00000560885 SLC4A5Q9BY07 1137 aa8.8□□□□□ -1
USP8-213ENST00000560885 FER1L6Q2WGJ9 1857 aa8.8□□□□□ -1
USP8-213ENST00000560885 MRC1P22897 1456 aa8.79□□□□□ -1
USP8-213ENST00000560885 USPL1Q5W0Q7 1092 aa8.79□□□□□ -1
USP8-213ENST00000560885 AEBP1Q8IUX7 1158 aa8.79□□□□□ -1
USP8-213ENST00000560885 TNS4Q8IZW8 715 aa8.79□□□□□ -1
USP8-213ENST00000560885 ANKRD31Q8N7Z5 1873 aa8.79□□□□□ -1
USP8-213ENST00000560885 SOS1Q07889 1333 aaPredicted RBP8.79□□□□□ -1
USP8-213ENST00000560885 COL15A1P39059 1388 aa8.78□□□□□ -1
USP8-213ENST00000560885 CYP19A1P11511 503 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms