RNA–Protein interactions for RNA: ENST00000560731.5

MARK3-222, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-222	ENST00000560731		A6NJR5	290 aa		10.25	□□□□□ -0.77
MARK3-222	ENST00000560731	LCE2B	O14633	110 aa		10.25	□□□□□ -0.77
MARK3-222	ENST00000560731	DXO	O77932	396 aa	Known RBP	10.25	□□□□□ -0.77
MARK3-222	ENST00000560731	FDX1	P10109	184 aa		10.25	□□□□□ -0.77
MARK3-222	ENST00000560731	TNNT2	P45379	298 aa	Predicted RBP	10.25	□□□□□ -0.77
MARK3-222	ENST00000560731	PRPF38B	Q5VTL8	546 aa	Known RBP	10.25	□□□□□ -0.77
MARK3-222	ENST00000560731	CLUAP1	Q96AJ1	413 aa		10.25	□□□□□ -0.77
MARK3-222	ENST00000560731	TOPAZ1	Q8N9V7	1692 aa		10.25	□□□□□ -0.77
MARK3-222	ENST00000560731	WDR43	Q15061	677 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
MARK3-222	ENST00000560731	PKDCC	Q504Y2	493 aa		10.24	□□□□□ -0.77
MARK3-222	ENST00000560731	NME9	Q86XW9	330 aa		10.24	□□□□□ -0.77
MARK3-222	ENST00000560731	HLA-C	Q95604	372 aa		10.24	□□□□□ -0.77
MARK3-222	ENST00000560731	CFAP53	Q96M91	514 aa		10.24	□□□□□ -0.77
MARK3-222	ENST00000560731	C19orf44	Q9H6X5	657 aa		10.24	□□□□□ -0.77
MARK3-222	ENST00000560731	USP6	P35125	1406 aa		10.24	□□□□□ -0.77
MARK3-222	ENST00000560731	BLM	P54132	1417 aa	Predicted RBP	10.24	□□□□□ -0.77
MARK3-222	ENST00000560731	NKTR	P30414	1462 aa	Known RBP	10.23	□□□□□ -0.77
MARK3-222	ENST00000560731	RTL5	Q5HYW3	569 aa	Predicted RBP	10.23	□□□□□ -0.77
MARK3-222	ENST00000560731	NGDN	Q8NEJ9	315 aa	Known RBP	10.23	□□□□□ -0.77
MARK3-222	ENST00000560731	PMFBP1	Q8TBY8	1022 aa		10.23	□□□□□ -0.77
MARK3-222	ENST00000560731	CABLES1	Q8TDN4	633 aa		10.23	□□□□□ -0.77
MARK3-222	ENST00000560731	SNRK	Q9NRH2	765 aa		10.23	□□□□□ -0.77
MARK3-222	ENST00000560731	PCDHGC3	Q9UN70	934 aa		10.23	□□□□□ -0.77
MARK3-222	ENST00000560731	TTC21A	Q8NDW8	1320 aa		10.23	□□□□□ -0.77
MARK3-222	ENST00000560731	AKAP12	Q02952	1782 aa		10.23	□□□□□ -0.77
MARK3-222	ENST00000560731	AATK	Q6ZMQ8	1374 aa		10.23	□□□□□ -0.77
MARK3-222	ENST00000560731	PNPLA6	Q8IY17	1366 aa		10.23	□□□□□ -0.77
MARK3-222	ENST00000560731	TNFRSF10A	O00220	468 aa		10.22	□□□□□ -0.77
MARK3-222	ENST00000560731	GUCA2A	Q02747	115 aa		10.22	□□□□□ -0.77
MARK3-222	ENST00000560731	COG3	Q96JB2	828 aa		10.22	□□□□□ -0.77
MARK3-222	ENST00000560731	ZBTB3	Q9H5J0	574 aa		10.22	□□□□□ -0.77
MARK3-222	ENST00000560731	PKD2L1	Q9P0L9	805 aa		10.22	□□□□□ -0.77
MARK3-222	ENST00000560731	POLK	Q9UBT6	870 aa		10.22	□□□□□ -0.77
MARK3-222	ENST00000560731	MON2	Q7Z3U7	1717 aa		10.21	□□□□□ -0.77
MARK3-222	ENST00000560731	FMN2	Q9NZ56	1722 aa		10.21	□□□□□ -0.77
MARK3-222	ENST00000560731	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.21	□□□□□ -0.77
MARK3-222	ENST00000560731	NUTM2E	B1AL46	878 aa	Predicted RBP	10.21	□□□□□ -0.77
MARK3-222	ENST00000560731	FOXC1	Q12948	553 aa		10.21	□□□□□ -0.77
MARK3-222	ENST00000560731	RETREG3	Q86VR2	466 aa		10.21	□□□□□ -0.77
MARK3-222	ENST00000560731	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.21	□□□□□ -0.77
MARK3-222	ENST00000560731	NGEF	Q8N5V2	710 aa		10.21	□□□□□ -0.77
MARK3-222	ENST00000560731	ANKRD26	Q9UPS8	1709 aa		10.21	□□□□□ -0.78
MARK3-222	ENST00000560731	PDE3B	Q13370	1112 aa		10.2	□□□□□ -0.78
MARK3-222	ENST00000560731	USP31	Q70CQ4	1352 aa		10.2	□□□□□ -0.78
MARK3-222	ENST00000560731	STRC	Q7RTU9	1775 aa		10.2	□□□□□ -0.78
MARK3-222	ENST00000560731	ITSN1	Q15811	1721 aa		10.19	□□□□□ -0.78
MARK3-222	ENST00000560731	NALCN	Q8IZF0	1738 aa		10.19	□□□□□ -0.78
MARK3-222	ENST00000560731	TMEM94	Q12767	1356 aa		10.19	□□□□□ -0.78
MARK3-222	ENST00000560731	JUND	P17535	347 aa		10.19	□□□□□ -0.78
MARK3-222	ENST00000560731	FBLN1	P23142	703 aa		10.19	□□□□□ -0.78
MARK3-222	ENST00000560731	ESCO1	Q5FWF5	840 aa		10.19	□□□□□ -0.78
MARK3-222	ENST00000560731	POM121	Q96HA1	1249 aa		10.19	□□□□□ -0.78
MARK3-222	ENST00000560731	ARX	Q96QS3	562 aa		10.19	□□□□□ -0.78
MARK3-222	ENST00000560731	NUDC	Q9Y266	331 aa		10.19	□□□□□ -0.78
MARK3-222	ENST00000560731	KIF20B	Q96Q89	1820 aa		10.19	□□□□□ -0.78
MARK3-222	ENST00000560731	OVOS2	A0A0J9YW53	1432 aa		10.18	□□□□□ -0.78
MARK3-222	ENST00000560731	OVOS2	Q6IE36	1432 aa		10.18	□□□□□ -0.78
MARK3-222	ENST00000560731	FAM187A	A6NFU0	413 aa		10.18	□□□□□ -0.78
MARK3-222	ENST00000560731	RAD21	O60216	631 aa		10.18	□□□□□ -0.78
MARK3-222	ENST00000560731	MTMR14	Q8NCE2	650 aa		10.18	□□□□□ -0.78
MARK3-222	ENST00000560731	RUNDC1	Q96C34	613 aa		10.18	□□□□□ -0.78
MARK3-222	ENST00000560731	ORAI2	Q96SN7	254 aa		10.18	□□□□□ -0.78
MARK3-222	ENST00000560731	RGPD8	O14715	1765 aa	Predicted RBP	10.18	□□□□□ -0.78
MARK3-222	ENST00000560731	COL3A1	P02461	1466 aa	Predicted RBP	10.17	□□□□□ -0.78
MARK3-222	ENST00000560731	DCC	P43146	1447 aa		10.17	□□□□□ -0.78
MARK3-222	ENST00000560731	SMG6	Q86US8	1419 aa	Known RBP	10.17	□□□□□ -0.78
MARK3-222	ENST00000560731	SOCS7	O14512	581 aa		10.17	□□□□□ -0.78
MARK3-222	ENST00000560731	TRAK2	O60296	914 aa		10.17	□□□□□ -0.78
MARK3-222	ENST00000560731	DIAPH1	O60610	1272 aa	Known RBP	10.17	□□□□□ -0.78
MARK3-222	ENST00000560731	AP1G2	O75843	785 aa		10.17	□□□□□ -0.78
MARK3-222	ENST00000560731	ATF3	P18847	181 aa		10.17	□□□□□ -0.78
MARK3-222	ENST00000560731	MYT1	Q01538	1121 aa		10.17	□□□□□ -0.78
MARK3-222	ENST00000560731	TRIM32	Q13049	653 aa		10.17	□□□□□ -0.78
MARK3-222	ENST00000560731	MTMR2	Q13614	643 aa		10.17	□□□□□ -0.78
MARK3-222	ENST00000560731	COG6	Q9Y2V7	657 aa		10.17	□□□□□ -0.78
MARK3-222	ENST00000560731	NRK	Q7Z2Y5	1582 aa		10.17	□□□□□ -0.78
MARK3-222	ENST00000560731	STRCP1	A6NGW2	1772 aa		10.16	□□□□□ -0.78
MARK3-222	ENST00000560731	ZNF521	Q96K83	1311 aa		10.16	□□□□□ -0.78
MARK3-222	ENST00000560731	C6orf229	H3BNL8	230 aa		10.16	□□□□□ -0.78
MARK3-222	ENST00000560731	APAF1	O14727	1248 aa		10.16	□□□□□ -0.78
MARK3-222	ENST00000560731	PSME1	Q06323	249 aa		10.16	□□□□□ -0.78
MARK3-222	ENST00000560731	CYP4X1	Q8N118	509 aa		10.16	□□□□□ -0.78
MARK3-222	ENST00000560731	SYMPK	Q92797	1274 aa	Known RBP	10.16	□□□□□ -0.78
MARK3-222	ENST00000560731	C1orf115	Q9H7X2	142 aa		10.16	□□□□□ -0.78
MARK3-222	ENST00000560731	EMILIN1	Q9Y6C2	1016 aa		10.16	□□□□□ -0.78
MARK3-222	ENST00000560731	C1orf167	Q5SNV9	1468 aa		10.16	□□□□□ -0.78
MARK3-222	ENST00000560731	WNT7A	O00755	349 aa		10.15	□□□□□ -0.78
MARK3-222	ENST00000560731	USP17L8	P0C7I0	530 aa		10.15	□□□□□ -0.78
MARK3-222	ENST00000560731	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.15	□□□□□ -0.78
MARK3-222	ENST00000560731	IL13	P35225	146 aa		10.15	□□□□□ -0.78
MARK3-222	ENST00000560731	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
MARK3-222	ENST00000560731	CCDC146	Q8IYE0	955 aa		10.15	□□□□□ -0.78
MARK3-222	ENST00000560731	CCDC24	Q8N4L8	307 aa		10.15	□□□□□ -0.78
MARK3-222	ENST00000560731	PLEKHF1	Q96S99	279 aa		10.15	□□□□□ -0.78
MARK3-222	ENST00000560731	TOR4A	Q9NXH8	423 aa		10.15	□□□□□ -0.78
MARK3-222	ENST00000560731	SHPRH	Q149N8	1683 aa		10.15	□□□□□ -0.79
MARK3-222	ENST00000560731	SENP3-EIF4A1	A0A087X0R7	540 aa		10.14	□□□□□ -0.79
MARK3-222	ENST00000560731	FOXO3	O43524	673 aa		10.14	□□□□□ -0.79
MARK3-222	ENST00000560731	RRS1	Q15050	365 aa	Known RBP	10.14	□□□□□ -0.79
MARK3-222	ENST00000560731	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.14	□□□□□ -0.79

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