RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 UTYO14607 1347 aa21.32■■□□□ 1
TRPM1-211ENST00000560658 NBPF7P0C2Y1 421 aaPredicted RBP21.32■■□□□ 1
TRPM1-211ENST00000560658 OS9Q13438 667 aaPredicted RBP21.32■■□□□ 1
TRPM1-211ENST00000560658 UVSSAQ2YD98 709 aa21.32■■□□□ 1
TRPM1-211ENST00000560658 USHBP1Q8N6Y0 703 aa21.32■■□□□ 1
TRPM1-211ENST00000560658 LGR6Q9HBX8 967 aa21.32■■□□□ 1
TRPM1-211ENST00000560658 SH2B1Q9NRF2 756 aaPredicted RBP21.32■■□□□ 1
TRPM1-211ENST00000560658 DIAPH3Q9NSV4 1193 aa21.32■■□□□ 1
TRPM1-211ENST00000560658 EVI5LQ96CN4 794 aa21.31■■□□□ 1
TRPM1-211ENST00000560658 TSPY26PQ9H489 355 aa21.31■■□□□ 1
TRPM1-211ENST00000560658 CCDC39Q9UFE4 941 aa21.31■■□□□ 1
TRPM1-211ENST00000560658 MST1RQ04912 1400 aa21.31■■□□□ 1
TRPM1-211ENST00000560658 ARHGEF25Q86VW2 580 aa21.3■■□□□ 1
TRPM1-211ENST00000560658 C9orf78Q9NZ63 289 aaPredicted RBP21.3■■□□□ 1
TRPM1-211ENST00000560658 ADAMTS7Q9UKP4 1686 aa21.3■■□□□ 1
TRPM1-211ENST00000560658 ZNF500O60304 480 aaPredicted RBP21.29■■□□□ 1
TRPM1-211ENST00000560658 VPS53Q5VIR6 699 aa21.29■■□□□ 1
TRPM1-211ENST00000560658 LINS1Q8NG48 757 aa21.29■■□□□ 1
TRPM1-211ENST00000560658 UPF3BQ9BZI7 483 aaKnown RBP21.29■■□□□ 1
TRPM1-211ENST00000560658 GIGYF1O75420 1035 aaPredicted RBP21.29■■□□□ 1
TRPM1-211ENST00000560658 OFD1O75665 1012 aa21.29■■□□□ 1
TRPM1-211ENST00000560658 ABCC6O95255 1503 aa21.28■■□□□ 1
TRPM1-211ENST00000560658 SYCE3A1L190 88 aa21.28■■□□□ 1
TRPM1-211ENST00000560658 IFIT2P09913 472 aaKnown RBP21.28■■□□□ 1
TRPM1-211ENST00000560658 SNRKQ9NRH2 765 aa21.28■■□□□ 1
TRPM1-211ENST00000560658 RBM27Q9P2N5 1060 aaKnown RBP21.28■■□□□ 1
TRPM1-211ENST00000560658 ZSCAN22P10073 491 aaPredicted RBP21.27■■□□□ 1
TRPM1-211ENST00000560658 RPAP1Q9BWH6 1393 aaPredicted RBP21.27■□□□□ 0.99
TRPM1-211ENST00000560658 SOCS7O14512 581 aa21.26■□□□□ 0.99
TRPM1-211ENST00000560658 ESCO1Q5FWF5 840 aa21.26■□□□□ 0.99
TRPM1-211ENST00000560658 SMC3Q9UQE7 1217 aa21.26■□□□□ 0.99
TRPM1-211ENST00000560658 MAP3K2Q9Y2U5 619 aa21.26■□□□□ 0.99
TRPM1-211ENST00000560658 GCP02774 474 aa21.26■□□□□ 0.99
TRPM1-211ENST00000560658 ZKSCAN1P17029 563 aaPredicted RBP21.26■□□□□ 0.99
TRPM1-211ENST00000560658 DDX21Q9NR30 783 aaKnown RBP eCLIP21.26■□□□□ 0.99
TRPM1-211ENST00000560658 PSMA5P28066 241 aa21.25■□□□□ 0.99
TRPM1-211ENST00000560658 AK2P54819 239 aa21.25■□□□□ 0.99
TRPM1-211ENST00000560658 CCDC183Q5T5S1 534 aa21.25■□□□□ 0.99
TRPM1-211ENST00000560658 ZSWIM6Q9HCJ5 1215 aa21.25■□□□□ 0.99
TRPM1-211ENST00000560658 CYP46A1Q9Y6A2 500 aa21.25■□□□□ 0.99
TRPM1-211ENST00000560658 KIF1AQ12756 1690 aa21.24■□□□□ 0.99
TRPM1-211ENST00000560658 SIPA1L3O60292 1781 aaPredicted RBP21.24■□□□□ 0.99
TRPM1-211ENST00000560658 GRM8O00222 908 aa21.24■□□□□ 0.99
TRPM1-211ENST00000560658 STX6O43752 255 aa21.24■□□□□ 0.99
TRPM1-211ENST00000560658 RRP9O43818 475 aaKnown RBP21.24■□□□□ 0.99
TRPM1-211ENST00000560658 UBE2HP62256 183 aa21.24■□□□□ 0.99
TRPM1-211ENST00000560658 ALDH8A1Q9H2A2 487 aaPredicted RBP21.24■□□□□ 0.99
TRPM1-211ENST00000560658 ZKSCAN5Q9Y2L8 839 aa21.24■□□□□ 0.99
TRPM1-211ENST00000560658 G3BP1Q13283 466 aaKnown RBP eCLIP21.23■□□□□ 0.99
TRPM1-211ENST00000560658 CWC27Q6UX04 472 aaKnown RBP21.23■□□□□ 0.99
TRPM1-211ENST00000560658 MPRIPQ6WCQ1 1025 aa21.23■□□□□ 0.99
TRPM1-211ENST00000560658 USP48Q86UV5 1035 aa21.23■□□□□ 0.99
TRPM1-211ENST00000560658 IL25Q9H293 177 aa21.23■□□□□ 0.99
TRPM1-211ENST00000560658 KCNQ3O43525 872 aa21.22■□□□□ 0.99
TRPM1-211ENST00000560658 ANKRD1Q15327 319 aa21.22■□□□□ 0.99
TRPM1-211ENST00000560658 LARP1Q6PKG0 1096 aaKnown RBP21.22■□□□□ 0.99
TRPM1-211ENST00000560658 ANKRD24Q8TF21 1146 aa21.22■□□□□ 0.99
TRPM1-211ENST00000560658 RNF20Q5VTR2 975 aa21.22■□□□□ 0.99
TRPM1-211ENST00000560658 RUFY3Q7L099 469 aa21.22■□□□□ 0.99
TRPM1-211ENST00000560658 PDRG1Q9NUG6 133 aa21.22■□□□□ 0.99
TRPM1-211ENST00000560658 F13A1P00488 732 aa21.21■□□□□ 0.99
TRPM1-211ENST00000560658 MRC1P22897 1456 aa21.21■□□□□ 0.99
TRPM1-211ENST00000560658 COL15A1P39059 1388 aa21.21■□□□□ 0.99
TRPM1-211ENST00000560658 RFX7Q2KHR2 1363 aa21.21■□□□□ 0.99
TRPM1-211ENST00000560658 FOXD4L5Q5VV16 416 aaPredicted RBP21.21■□□□□ 0.99
TRPM1-211ENST00000560658 CCDC171Q6TFL3 1326 aa21.21■□□□□ 0.99
TRPM1-211ENST00000560658 NOL8Q76FK4 1167 aaKnown RBP21.21■□□□□ 0.99
TRPM1-211ENST00000560658 TICAM2Q86XR7 235 aa21.21■□□□□ 0.99
TRPM1-211ENST00000560658 FOXD4L4Q8WXT5 416 aaPredicted RBP21.21■□□□□ 0.99
TRPM1-211ENST00000560658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.21■□□□□ 0.99
TRPM1-211ENST00000560658 NSFL1CQ9UNZ2 370 aaKnown RBP21.21■□□□□ 0.99
TRPM1-211ENST00000560658 PXDNQ92626 1479 aa21.2■□□□□ 0.98
TRPM1-211ENST00000560658 MAP4K4O95819 1239 aaPredicted RBP21.2■□□□□ 0.98
TRPM1-211ENST00000560658 CASTP20810 708 aaKnown RBP21.2■□□□□ 0.98
TRPM1-211ENST00000560658 NEXNQ0ZGT2 675 aa21.2■□□□□ 0.98
TRPM1-211ENST00000560658 NECTIN1Q15223 517 aa21.2■□□□□ 0.98
TRPM1-211ENST00000560658 RASEFQ8IZ41 740 aa21.2■□□□□ 0.98
TRPM1-211ENST00000560658 PDCP20941 246 aa21.19■□□□□ 0.98
TRPM1-211ENST00000560658 SYT1P21579 422 aa21.19■□□□□ 0.98
TRPM1-211ENST00000560658 ILDR2Q71H61 639 aa21.19■□□□□ 0.98
TRPM1-211ENST00000560658 LRRC59Q96AG4 307 aaKnown RBP21.19■□□□□ 0.98
TRPM1-211ENST00000560658 HMG20BQ9P0W2 317 aa21.19■□□□□ 0.98
TRPM1-211ENST00000560658 NPHP4O75161 1426 aaPredicted RBP21.19■□□□□ 0.98
TRPM1-211ENST00000560658 AACSQ86V21 672 aa21.18■□□□□ 0.98
TRPM1-211ENST00000560658 RGPD2P0DJD1 1756 aa21.18■□□□□ 0.98
TRPM1-211ENST00000560658 TRPM3Q9HCF6 1732 aaPredicted RBP21.18■□□□□ 0.98
TRPM1-211ENST00000560658 MAP4K1Q92918 833 aa21.18■□□□□ 0.98
TRPM1-211ENST00000560658 JAKMIP1Q96N16 626 aaKnown RBP21.18■□□□□ 0.98
TRPM1-211ENST00000560658 SPG7Q9UQ90 795 aa21.17■□□□□ 0.98
TRPM1-211ENST00000560658 TSGA10IPQ3SY00 556 aa21.16■□□□□ 0.98
TRPM1-211ENST00000560658 JCADQ9P266 1359 aa21.16■□□□□ 0.98
TRPM1-211ENST00000560658 GLIPR1L2Q4G1C9 344 aa21.15■□□□□ 0.98
TRPM1-211ENST00000560658 SUCLG2Q96I99 432 aa21.15■□□□□ 0.98
TRPM1-211ENST00000560658 KRT32Q14532 448 aa21.15■□□□□ 0.98
TRPM1-211ENST00000560658 PRPF40BQ6NWY9 871 aaKnown RBP21.15■□□□□ 0.98
TRPM1-211ENST00000560658 ZBTB7CA1YPR0 619 aa21.14■□□□□ 0.97
TRPM1-211ENST00000560658 GADD45BO75293 160 aaPredicted RBP21.14■□□□□ 0.97
TRPM1-211ENST00000560658 ANXA1P04083 346 aa21.14■□□□□ 0.97
TRPM1-211ENST00000560658 GJB2P29033 226 aa21.14■□□□□ 0.97
TRPM1-211ENST00000560658 CREB3L3Q68CJ9 461 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms