RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ZBTB3Q9H5J0 574 aa16.86■□□□□ 0.29
CTDSPL2-209ENST00000560620 MBIPQ9NS73 344 aa16.86■□□□□ 0.29
CTDSPL2-209ENST00000560620 NIP7Q9Y221 180 aaKnown RBP eCLIP16.86■□□□□ 0.29
CTDSPL2-209ENST00000560620 SALL2Q9Y467 1007 aaPredicted RBP16.86■□□□□ 0.29
CTDSPL2-209ENST00000560620 ERBB4Q15303 1308 aa16.86■□□□□ 0.29
CTDSPL2-209ENST00000560620 KIAA1551Q9HCM1 1747 aa16.85■□□□□ 0.29
CTDSPL2-209ENST00000560620 ST5P78524 1137 aa16.85■□□□□ 0.29
CTDSPL2-209ENST00000560620 IFT57Q9NWB7 429 aa16.85■□□□□ 0.29
CTDSPL2-209ENST00000560620 ANXA1P04083 346 aa16.84■□□□□ 0.29
CTDSPL2-209ENST00000560620 GTF2E1P29083 439 aaPredicted RBP16.84■□□□□ 0.29
CTDSPL2-209ENST00000560620 AIMP1Q12904 312 aaKnown RBP16.84■□□□□ 0.29
CTDSPL2-209ENST00000560620 HLFQ16534 295 aa16.84■□□□□ 0.29
CTDSPL2-209ENST00000560620 DALRD3Q5D0E6 543 aaKnown RBP16.84■□□□□ 0.29
CTDSPL2-209ENST00000560620 HDGFL1Q5TGJ6 251 aa16.84■□□□□ 0.29
CTDSPL2-209ENST00000560620 PRR5LQ6MZQ0 368 aa16.84■□□□□ 0.29
CTDSPL2-209ENST00000560620 TTLL7Q6ZT98 887 aa16.84■□□□□ 0.29
CTDSPL2-209ENST00000560620 MAP3K15Q6ZN16 1313 aa16.84■□□□□ 0.29
CTDSPL2-209ENST00000560620 NRXN2Q9P2S2 1712 aa16.84■□□□□ 0.29
CTDSPL2-209ENST00000560620 H0YIN7 160 aa16.83■□□□□ 0.28
CTDSPL2-209ENST00000560620 ELL2O00472 640 aaPredicted RBP16.83■□□□□ 0.28
CTDSPL2-209ENST00000560620 KCNA3P22001 575 aa16.83■□□□□ 0.28
CTDSPL2-209ENST00000560620 ARHGAP27Q6ZUM4 889 aa16.83■□□□□ 0.28
CTDSPL2-209ENST00000560620 C2CD5Q86YS7 1000 aa16.83■□□□□ 0.28
CTDSPL2-209ENST00000560620 ERVV-1B6SEH8 477 aa16.82■□□□□ 0.28
CTDSPL2-209ENST00000560620 PDE6BP35913 854 aa16.82■□□□□ 0.28
CTDSPL2-209ENST00000560620 PROSER3Q2NL68 480 aa16.82■□□□□ 0.28
CTDSPL2-209ENST00000560620 DUSP27Q5VZP5 1158 aa16.82■□□□□ 0.28
CTDSPL2-209ENST00000560620 TPTE2Q6XPS3 522 aa16.82■□□□□ 0.28
CTDSPL2-209ENST00000560620 BRIP1Q9BX63 1249 aa16.82■□□□□ 0.28
CTDSPL2-209ENST00000560620 ZNF853P0CG23 659 aa16.81■□□□□ 0.28
CTDSPL2-209ENST00000560620 GPTP24298 496 aa16.81■□□□□ 0.28
CTDSPL2-209ENST00000560620 PDIA6Q15084 440 aa16.81■□□□□ 0.28
CTDSPL2-209ENST00000560620 WWC1Q8IX03 1113 aa16.81■□□□□ 0.28
CTDSPL2-209ENST00000560620 ZNF622Q969S3 477 aaKnown RBP eCLIP16.81■□□□□ 0.282e-6■□□□□ 10.2
CTDSPL2-209ENST00000560620 CHPF2Q9P2E5 772 aa16.81■□□□□ 0.28
CTDSPL2-209ENST00000560620 RGL2O15211 777 aa16.8■□□□□ 0.28
CTDSPL2-209ENST00000560620 HOXB7P09629 217 aa16.8■□□□□ 0.28
CTDSPL2-209ENST00000560620 CCDC27Q2M243 656 aa16.8■□□□□ 0.28
CTDSPL2-209ENST00000560620 COPS6Q7L5N1 327 aa16.8■□□□□ 0.28
CTDSPL2-209ENST00000560620 XAGE3Q8WTP9 111 aa16.8■□□□□ 0.28
CTDSPL2-209ENST00000560620 DDX21Q9NR30 783 aaKnown RBP eCLIP16.8■□□□□ 0.28
CTDSPL2-209ENST00000560620 BRCA1P38398 1863 aaKnown RBP16.8■□□□□ 0.28
CTDSPL2-209ENST00000560620 NUP98P52948 1817 aa16.8■□□□□ 0.28
CTDSPL2-209ENST00000560620 TTLL6Q8N841 843 aa16.79■□□□□ 0.28
CTDSPL2-209ENST00000560620 TSR2Q969E8 191 aaKnown RBP16.79■□□□□ 0.28
CTDSPL2-209ENST00000560620 DBF4Q9UBU7 674 aaPredicted RBP16.79■□□□□ 0.28
CTDSPL2-209ENST00000560620 GIGYF2Q6Y7W6 1299 aaKnown RBP16.78■□□□□ 0.28
CTDSPL2-209ENST00000560620 ZNF784Q8NCA9 323 aaPredicted RBP16.78■□□□□ 0.28
CTDSPL2-209ENST00000560620 NYXQ9GZU5 481 aa16.78■□□□□ 0.28
CTDSPL2-209ENST00000560620 PDZRN3Q9UPQ7 1066 aa16.78■□□□□ 0.28
CTDSPL2-209ENST00000560620 ANKRD31Q8N7Z5 1873 aa16.77■□□□□ 0.27
CTDSPL2-209ENST00000560620 ARFGEF1Q9Y6D6 1849 aa16.76■□□□□ 0.27
CTDSPL2-209ENST00000560620 LRP10Q7Z4F1 713 aa16.76■□□□□ 0.27
CTDSPL2-209ENST00000560620 NUTM1Q86Y26 1132 aa16.76■□□□□ 0.27
CTDSPL2-209ENST00000560620 C8orf58Q8NAV2 365 aa16.76■□□□□ 0.27
CTDSPL2-209ENST00000560620 HYPKQ9NX55 129 aa16.76■□□□□ 0.27
CTDSPL2-209ENST00000560620 ZNF219Q9P2Y4 722 aaPredicted RBP16.76■□□□□ 0.27
CTDSPL2-209ENST00000560620 ATP10DQ9P241 1426 aa16.76■□□□□ 0.27
CTDSPL2-209ENST00000560620 DLEC1Q9Y238 1755 aa16.75■□□□□ 0.27
CTDSPL2-209ENST00000560620 PPP1R42Q7Z4L9 355 aa16.75■□□□□ 0.27
CTDSPL2-209ENST00000560620 CHMP4AQ9BY43 222 aa16.75■□□□□ 0.27
CTDSPL2-209ENST00000560620 UBN2Q6ZU65 1347 aa16.74■□□□□ 0.27
CTDSPL2-209ENST00000560620 NCBP3Q53F19 620 aaKnown RBP16.74■□□□□ 0.27
CTDSPL2-209ENST00000560620 HSP90AB3PQ58FF7 597 aa16.74■□□□□ 0.27
CTDSPL2-209ENST00000560620 CCDC30Q5VVM6 783 aa16.74■□□□□ 0.27
CTDSPL2-209ENST00000560620 ZNF34Q8IZ26 560 aa16.74■□□□□ 0.27
CTDSPL2-209ENST00000560620 ZNF526Q8TF50 670 aaPredicted RBP16.74■□□□□ 0.27
CTDSPL2-209ENST00000560620 MASTLQ96GX5 879 aa16.74■□□□□ 0.27
CTDSPL2-209ENST00000560620 IL16Q14005 1332 aa16.73■□□□□ 0.27
CTDSPL2-209ENST00000560620 SRGNP10124 158 aa16.73■□□□□ 0.27
CTDSPL2-209ENST00000560620 ERFEQ4G0M1 354 aa16.73■□□□□ 0.27
CTDSPL2-209ENST00000560620 PARP10Q53GL7 1025 aa16.73■□□□□ 0.27
CTDSPL2-209ENST00000560620 SUSD4Q5VX71 490 aa16.73■□□□□ 0.27
CTDSPL2-209ENST00000560620 ANKRD13DQ6ZTN6 518 aa16.73■□□□□ 0.27
CTDSPL2-209ENST00000560620 WDR63Q8IWG1 891 aa16.73■□□□□ 0.27
CTDSPL2-209ENST00000560620 TSPYL6Q8N831 410 aa16.73■□□□□ 0.27
CTDSPL2-209ENST00000560620 CNKSR1Q969H4 720 aa16.73■□□□□ 0.27
CTDSPL2-209ENST00000560620 COL11A2P13942 1736 aaPredicted RBP16.73■□□□□ 0.27
CTDSPL2-209ENST00000560620 C21orf2O43822 256 aa16.72■□□□□ 0.27
CTDSPL2-209ENST00000560620 GOLGA2Q08379 1002 aa16.72■□□□□ 0.27
CTDSPL2-209ENST00000560620 STYK1Q6J9G0 422 aa16.72■□□□□ 0.27
CTDSPL2-209ENST00000560620 UTP14AQ9BVJ6 771 aaKnown RBP16.72■□□□□ 0.27
CTDSPL2-209ENST00000560620 STK31Q9BXU1 1019 aa16.72■□□□□ 0.27
CTDSPL2-209ENST00000560620 CACNA1SQ13698 1873 aa16.71■□□□□ 0.27
CTDSPL2-209ENST00000560620 NPR1P16066 1061 aa16.71■□□□□ 0.27
CTDSPL2-209ENST00000560620 TCIRG1Q13488 830 aa16.71■□□□□ 0.27
CTDSPL2-209ENST00000560620 TWISTNBQ3B726 338 aaPredicted RBP16.71■□□□□ 0.27
CTDSPL2-209ENST00000560620 RIC3Q7Z5B4 369 aa16.71■□□□□ 0.27
CTDSPL2-209ENST00000560620 PLBD2Q8NHP8 589 aa16.71■□□□□ 0.27
CTDSPL2-209ENST00000560620 ZNF428Q96B54 188 aa16.71■□□□□ 0.27
CTDSPL2-209ENST00000560620 PHAXQ9H814 394 aaKnown RBP16.71■□□□□ 0.27
CTDSPL2-209ENST00000560620 ABCC12Q96J65 1359 aa16.7■□□□□ 0.26
CTDSPL2-209ENST00000560620 TCERG1O14776 1098 aaKnown RBP16.7■□□□□ 0.26
CTDSPL2-209ENST00000560620 RASSF7Q02833 373 aa16.7■□□□□ 0.26
CTDSPL2-209ENST00000560620 C9orf131Q5VYM1 1079 aa16.7■□□□□ 0.26
CTDSPL2-209ENST00000560620 PRPF40BQ6NWY9 871 aaKnown RBP16.7■□□□□ 0.26
CTDSPL2-209ENST00000560620 RPGRQ92834 1020 aaKnown RBP16.7■□□□□ 0.26
CTDSPL2-209ENST00000560620 RNF181Q9P0P0 153 aa16.7■□□□□ 0.26
CTDSPL2-209ENST00000560620 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
CTDSPL2-209ENST00000560620 IBTKQ9P2D0 1353 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms