RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 A0A1W2PNR3 127 aa7.42□□□□□ -1.22
TMOD3-207ENST00000560549 GDF11O95390 407 aa7.42□□□□□ -1.22
TMOD3-207ENST00000560549 FAM182BQ5T319 152 aa7.42□□□□□ -1.22
TMOD3-207ENST00000560549 SAMD5Q5TGI4 173 aa7.42□□□□□ -1.22
TMOD3-207ENST00000560549 ANKMY2Q8IV38 441 aa7.42□□□□□ -1.22
TMOD3-207ENST00000560549 GDF2Q9UK05 429 aaPredicted RBP7.42□□□□□ -1.22
TMOD3-207ENST00000560549 SEC13P55735 322 aa7.41□□□□□ -1.22
TMOD3-207ENST00000560549 CTBSQ01459 385 aa7.41□□□□□ -1.22
TMOD3-207ENST00000560549 TNP2Q05952 138 aa7.41□□□□□ -1.22
TMOD3-207ENST00000560549 ZMIZ1Q9ULJ6 1067 aa7.41□□□□□ -1.22
TMOD3-207ENST00000560549 GPC6Q9Y625 555 aaPredicted RBP7.41□□□□□ -1.22
TMOD3-207ENST00000560549 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.4□□□□□ -1.22
TMOD3-207ENST00000560549 FAM157BP0CG42 384 aa7.4□□□□□ -1.22
TMOD3-207ENST00000560549 TATP17735 454 aaPredicted RBP7.4□□□□□ -1.22
TMOD3-207ENST00000560549 IRS1P35568 1242 aa7.4□□□□□ -1.22
TMOD3-207ENST00000560549 PSMA6P60900 246 aaKnown RBP7.4□□□□□ -1.22
TMOD3-207ENST00000560549 LARP1Q6PKG0 1096 aaKnown RBP7.4□□□□□ -1.22
TMOD3-207ENST00000560549 SLCO4C1Q6ZQN7 724 aa7.4□□□□□ -1.22
TMOD3-207ENST00000560549 SERTM1A2A2V5 107 aa7.39□□□□□ -1.23
TMOD3-207ENST00000560549 DCDC2BA2VCK2 349 aa7.39□□□□□ -1.23
TMOD3-207ENST00000560549 SHISA8B8ZZ34 492 aa7.39□□□□□ -1.23
TMOD3-207ENST00000560549 ATXN7O15265 892 aaPredicted RBP7.39□□□□□ -1.23
TMOD3-207ENST00000560549 EFSO43281 561 aa7.39□□□□□ -1.23
TMOD3-207ENST00000560549 HIRAP54198 1017 aaPredicted RBP7.39□□□□□ -1.23
TMOD3-207ENST00000560549 ARSJQ5FYB0 599 aaPredicted RBP7.39□□□□□ -1.23
TMOD3-207ENST00000560549 KCTD17Q8N5Z5 321 aa7.39□□□□□ -1.23
TMOD3-207ENST00000560549 GOLGA6L1Q8N7Z2 621 aa7.39□□□□□ -1.23
TMOD3-207ENST00000560549 ZNF232Q9UNY5 417 aa7.39□□□□□ -1.23
TMOD3-207ENST00000560549 DNMT3AQ9Y6K1 912 aaPredicted RBP7.39□□□□□ -1.23
TMOD3-207ENST00000560549 ATAD2Q6PL18 1390 aa7.38□□□□□ -1.23
TMOD3-207ENST00000560549 ARAFP10398 606 aa7.38□□□□□ -1.23
TMOD3-207ENST00000560549 MAPTP10636 758 aaKnown RBP7.38□□□□□ -1.23
TMOD3-207ENST00000560549 BMP4P12644 408 aa7.38□□□□□ -1.23
TMOD3-207ENST00000560549 HOXB4P17483 251 aaPredicted RBP7.38□□□□□ -1.23
TMOD3-207ENST00000560549 SCG3Q8WXD2 468 aaKnown RBP7.38□□□□□ -1.23
TMOD3-207ENST00000560549 C2orf49Q9BVC5 232 aaPredicted RBP7.38□□□□□ -1.23
TMOD3-207ENST00000560549 STRN4Q9NRL3 753 aa7.38□□□□□ -1.23
TMOD3-207ENST00000560549 HCN4Q9Y3Q4 1203 aa7.38□□□□□ -1.23
TMOD3-207ENST00000560549 SCRIBQ14160 1630 aa7.38□□□□□ -1.23
TMOD3-207ENST00000560549 CNTNAP5Q8WYK1 1306 aa7.38□□□□□ -1.23
TMOD3-207ENST00000560549 PPP1R12BO60237 982 aaPredicted RBP7.37□□□□□ -1.23
TMOD3-207ENST00000560549 GRIN2CQ14957 1233 aa7.37□□□□□ -1.23
TMOD3-207ENST00000560549 EDARADDQ8WWZ3 215 aa7.37□□□□□ -1.23
TMOD3-207ENST00000560549 HSH2DQ96JZ2 352 aa7.37□□□□□ -1.23
TMOD3-207ENST00000560549 PHACTR1Q9C0D0 580 aa7.37□□□□□ -1.23
TMOD3-207ENST00000560549 AVENQ9NQS1 362 aaPredicted RBP7.37□□□□□ -1.23
TMOD3-207ENST00000560549 BICRAQ9NZM4 1560 aa7.37□□□□□ -1.23
TMOD3-207ENST00000560549 PHF20L1A8MW92 1017 aa7.36□□□□□ -1.23
TMOD3-207ENST00000560549 LAMC2Q13753 1193 aa7.36□□□□□ -1.23
TMOD3-207ENST00000560549 CCDC82Q8N4S0 544 aa7.36□□□□□ -1.23
TMOD3-207ENST00000560549 BEND7Q8N7W2 519 aaPredicted RBP7.36□□□□□ -1.23
TMOD3-207ENST00000560549 GALNT6Q8NCL4 622 aa7.36□□□□□ -1.23
TMOD3-207ENST00000560549 NEDD1Q8NHV4 660 aa7.36□□□□□ -1.23
TMOD3-207ENST00000560549 STK32AQ8WU08 396 aa7.36□□□□□ -1.23
TMOD3-207ENST00000560549 GGA1Q9UJY5 639 aa7.36□□□□□ -1.23
TMOD3-207ENST00000560549 NOVA2Q9UNW9 492 aaKnown RBP7.36□□□□□ -1.23
TMOD3-207ENST00000560549 EPXP11678 715 aa7.36□□□□□ -1.23
TMOD3-207ENST00000560549 CD33P20138 364 aa7.36□□□□□ -1.23
TMOD3-207ENST00000560549 C1orf53Q5VUE5 145 aa7.36□□□□□ -1.23
TMOD3-207ENST00000560549 LRRC69Q6ZNQ3 347 aa7.36□□□□□ -1.23
TMOD3-207ENST00000560549 BICDL1Q6ZP65 573 aa7.36□□□□□ -1.23
TMOD3-207ENST00000560549 ZNF280CQ8ND82 737 aa7.36□□□□□ -1.23
TMOD3-207ENST00000560549 CHMP7Q8WUX9 453 aaPredicted RBP7.36□□□□□ -1.23
TMOD3-207ENST00000560549 HINFPQ9BQA5 517 aa7.36□□□□□ -1.23
TMOD3-207ENST00000560549 KLF15Q9UIH9 416 aa7.36□□□□□ -1.23
TMOD3-207ENST00000560549 KHNYNO15037 678 aaKnown RBP7.35□□□□□ -1.23
TMOD3-207ENST00000560549 SNRPNP63162 240 aaKnown RBP7.35□□□□□ -1.23
TMOD3-207ENST00000560549 FAM69CQ0P6D2 419 aa7.35□□□□□ -1.23
TMOD3-207ENST00000560549 STAG2Q8N3U4 1231 aa7.35□□□□□ -1.23
TMOD3-207ENST00000560549 ARID3AQ99856 593 aa7.35□□□□□ -1.23
TMOD3-207ENST00000560549 RBM19Q9Y4C8 960 aaKnown RBP7.35□□□□□ -1.23
TMOD3-207ENST00000560549 WEE1P30291 646 aa7.34□□□□□ -1.23
TMOD3-207ENST00000560549 ALDH16A1Q8IZ83 802 aa7.34□□□□□ -1.23
TMOD3-207ENST00000560549 RHPN1Q8TCX5 695 aa7.34□□□□□ -1.23
TMOD3-207ENST00000560549 MDFIQ99750 246 aa7.34□□□□□ -1.23
TMOD3-207ENST00000560549 ITGB2P05107 769 aa7.33□□□□□ -1.24
TMOD3-207ENST00000560549 IGFBP4P22692 258 aa7.33□□□□□ -1.24
TMOD3-207ENST00000560549 LINC00114Q6XXX2 140 aa7.33□□□□□ -1.24
TMOD3-207ENST00000560549 PODNQ7Z5L7 613 aa7.33□□□□□ -1.24
TMOD3-207ENST00000560549 DCAF5Q96JK2 942 aa7.33□□□□□ -1.24
TMOD3-207ENST00000560549 SLAIN2Q9P270 581 aa7.33□□□□□ -1.24
TMOD3-207ENST00000560549 ZNF468Q5VIY5 522 aaPredicted RBP7.32□□□□□ -1.24
TMOD3-207ENST00000560549 FCHSD1Q86WN1 690 aa7.32□□□□□ -1.24
TMOD3-207ENST00000560549 FAM200AQ8TCP9 573 aa7.32□□□□□ -1.24
TMOD3-207ENST00000560549 NGLY1Q96IV0 654 aa7.32□□□□□ -1.24
TMOD3-207ENST00000560549 BTBD6Q96KE9 485 aa7.32□□□□□ -1.24
TMOD3-207ENST00000560549 BCS1LQ9Y276 419 aa7.32□□□□□ -1.24
TMOD3-207ENST00000560549 NEURL1BA8MQ27 555 aa7.31□□□□□ -1.24
TMOD3-207ENST00000560549 IGHA1P01876 353 aa7.31□□□□□ -1.24
TMOD3-207ENST00000560549 ADH6P28332 368 aa7.31□□□□□ -1.24
TMOD3-207ENST00000560549 SFSWAPQ12872 951 aaKnown RBP7.31□□□□□ -1.24
TMOD3-207ENST00000560549 ELOAQ14241 798 aaKnown RBP7.31□□□□□ -1.24
TMOD3-207ENST00000560549 TMEM164Q5U3C3 297 aa7.31□□□□□ -1.24
TMOD3-207ENST00000560549 SUSD3Q96L08 255 aa7.31□□□□□ -1.24
TMOD3-207ENST00000560549 MARK1Q9P0L2 795 aa7.31□□□□□ -1.24
TMOD3-207ENST00000560549 GJA3Q9Y6H8 435 aa7.31□□□□□ -1.24
TMOD3-207ENST00000560549 ATG7O95352 703 aa7.3□□□□□ -1.24
TMOD3-207ENST00000560549 DGKGP49619 791 aa7.3□□□□□ -1.24
TMOD3-207ENST00000560549 TYRO3Q06418 890 aa7.3□□□□□ -1.24
TMOD3-207ENST00000560549 FKBP5Q13451 457 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms