RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 LTBP1Q14766 1721 aa12.24□□□□□ -0.45
RABGGTA-217ENST00000560521 C7orf43Q8WVR3 580 aa12.24□□□□□ -0.45
RABGGTA-217ENST00000560521 MASTLQ96GX5 879 aa12.24□□□□□ -0.45
RABGGTA-217ENST00000560521 PCDH10Q9P2E7 1040 aa12.24□□□□□ -0.45
RABGGTA-217ENST00000560521 ZNF541Q9H0D2 1346 aa12.23□□□□□ -0.45
RABGGTA-217ENST00000560521 STARD3NLO95772 234 aa12.23□□□□□ -0.45
RABGGTA-217ENST00000560521 MAP2K1Q02750 393 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-217ENST00000560521 MLLT1Q03111 559 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-217ENST00000560521 MTHFSDQ2M296 383 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-217ENST00000560521 SOGA3Q5TF21 947 aa12.23□□□□□ -0.45
RABGGTA-217ENST00000560521 MAP1SQ66K74 1059 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-217ENST00000560521 MORC1Q86VD1 984 aa12.23□□□□□ -0.45
RABGGTA-217ENST00000560521 CNTROBQ8N137 903 aa12.23□□□□□ -0.45
RABGGTA-217ENST00000560521 HACL1Q9UJ83 578 aa12.23□□□□□ -0.45
RABGGTA-217ENST00000560521 POLR2AP24928 1970 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-217ENST00000560521 CCDC85CA6NKD9 419 aa12.22□□□□□ -0.45
RABGGTA-217ENST00000560521 EPHX2P34913 555 aa12.22□□□□□ -0.45
RABGGTA-217ENST00000560521 CNBD1Q8NA66 436 aa12.22□□□□□ -0.45
RABGGTA-217ENST00000560521 SETDB2Q96T68 719 aa12.22□□□□□ -0.45
RABGGTA-217ENST00000560521 HEG1Q9ULI3 1381 aa12.21□□□□□ -0.45
RABGGTA-217ENST00000560521 NUP98P52948 1817 aa12.21□□□□□ -0.45
RABGGTA-217ENST00000560521 CAMTA2O94983 1202 aa12.21□□□□□ -0.45
RABGGTA-217ENST00000560521 HMOX1P09601 288 aa12.21□□□□□ -0.45
RABGGTA-217ENST00000560521 IL6STP40189 918 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-217ENST00000560521 ST5P78524 1137 aa12.21□□□□□ -0.45
RABGGTA-217ENST00000560521 OLFM4Q6UX06 510 aa12.21□□□□□ -0.45
RABGGTA-217ENST00000560521 ZNF496Q96IT1 587 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-217ENST00000560521 ZNF277Q9NRM2 450 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-217ENST00000560521 ZNF330Q9Y3S2 320 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-217ENST00000560521 TNRC18O15417 2968 aaPredicted RBP12.21□□□□□ -0.46
RABGGTA-217ENST00000560521 RNF123Q5XPI4 1314 aa12.2□□□□□ -0.46
RABGGTA-217ENST00000560521 A1BGP04217 495 aa12.2□□□□□ -0.46
RABGGTA-217ENST00000560521 FKBP4Q02790 459 aaKnown RBP eCLIP12.2□□□□□ -0.46
RABGGTA-217ENST00000560521 CCDC93Q567U6 631 aa12.2□□□□□ -0.46
RABGGTA-217ENST00000560521 PNMA8AQ86V59 439 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-217ENST00000560521 TTC5Q8N0Z6 440 aa12.2□□□□□ -0.46
RABGGTA-217ENST00000560521 PDE4DIPQ5VU43 2346 aa12.19□□□□□ -0.46
RABGGTA-217ENST00000560521 FZD9O00144 591 aa12.19□□□□□ -0.46
RABGGTA-217ENST00000560521 NPHP1O15259 732 aa12.19□□□□□ -0.46
RABGGTA-217ENST00000560521 FMR1Q06787 632 aaKnown RBP eCLIP12.19□□□□□ -0.46
RABGGTA-217ENST00000560521 ZNF790Q6PG37 636 aa12.19□□□□□ -0.46
RABGGTA-217ENST00000560521 TEX13AQ9BXU3 409 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-217ENST00000560521 DDX21Q9NR30 783 aaKnown RBP eCLIP12.19□□□□□ -0.46
RABGGTA-217ENST00000560521 ABT1Q9ULW3 272 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-217ENST00000560521 KLRG2A4D1S0 409 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-217ENST00000560521 COL4A5P29400 1685 aa12.17□□□□□ -0.46
RABGGTA-217ENST00000560521 NPR1P16066 1061 aa12.17□□□□□ -0.46
RABGGTA-217ENST00000560521 IARSP41252 1262 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-217ENST00000560521 CYP4F22Q6NT55 531 aa12.17□□□□□ -0.46
RABGGTA-217ENST00000560521 GPC2Q8N158 579 aa12.17□□□□□ -0.46
RABGGTA-217ENST00000560521 SYNE4Q8N205 404 aa12.17□□□□□ -0.46
RABGGTA-217ENST00000560521 IL17REQ8NFR9 667 aa12.17□□□□□ -0.46
RABGGTA-217ENST00000560521 CAPNS2Q96L46 248 aa12.17□□□□□ -0.46
RABGGTA-217ENST00000560521 GPR101Q96P66 508 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-217ENST00000560521 AKAP11Q9UKA4 1901 aa12.16□□□□□ -0.46
RABGGTA-217ENST00000560521 NBPF5PQ86XG9 351 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-217ENST00000560521 DZIP3Q86Y13 1208 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-217ENST00000560521 RTKN2Q8IZC4 609 aa12.16□□□□□ -0.46
RABGGTA-217ENST00000560521 TSKSQ9UJT2 592 aa12.16□□□□□ -0.46
RABGGTA-217ENST00000560521 SNED1Q8TER0 1413 aa12.15□□□□□ -0.46
RABGGTA-217ENST00000560521 KCNQ3O43525 872 aa12.15□□□□□ -0.46
RABGGTA-217ENST00000560521 PIP4K2AP48426 406 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-217ENST00000560521 CST9Q5W186 159 aa12.15□□□□□ -0.46
RABGGTA-217ENST00000560521 CLEC4GQ6UXB4 293 aa12.15□□□□□ -0.46
RABGGTA-217ENST00000560521 NPM2Q86SE8 214 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-217ENST00000560521 BEGAINQ9BUH8 593 aa12.15□□□□□ -0.46
RABGGTA-217ENST00000560521 USP16Q9Y5T5 823 aa12.15□□□□□ -0.46
RABGGTA-217ENST00000560521 AOC2O75106 756 aa12.14□□□□□ -0.47
RABGGTA-217ENST00000560521 ECE1P42892 770 aa12.14□□□□□ -0.47
RABGGTA-217ENST00000560521 TEFQ10587 303 aa12.14□□□□□ -0.47
RABGGTA-217ENST00000560521 GRM1Q13255 1194 aa12.14□□□□□ -0.47
RABGGTA-217ENST00000560521 PAXIP1Q6ZW49 1069 aaPredicted RBP12.14□□□□□ -0.47
RABGGTA-217ENST00000560521 FMNL2Q96PY5 1086 aa12.14□□□□□ -0.47
RABGGTA-217ENST00000560521 KNSTRNQ9Y448 316 aa12.14□□□□□ -0.47
RABGGTA-217ENST00000560521 GNAT3A8MTJ3 354 aa12.13□□□□□ -0.47
RABGGTA-217ENST00000560521 ALDH1B1P30837 517 aa12.13□□□□□ -0.47
RABGGTA-217ENST00000560521 EPS15P42566 896 aa12.13□□□□□ -0.47
RABGGTA-217ENST00000560521 TPTE2Q6XPS3 522 aa12.13□□□□□ -0.47
RABGGTA-217ENST00000560521 MCOLN1Q9GZU1 580 aa12.13□□□□□ -0.47
RABGGTA-217ENST00000560521 GJA3Q9Y6H8 435 aa12.13□□□□□ -0.47
RABGGTA-217ENST00000560521 TLL2Q9Y6L7 1015 aa12.13□□□□□ -0.47
RABGGTA-217ENST00000560521 PRAMEF22A3QJZ6 481 aa12.12□□□□□ -0.47
RABGGTA-217ENST00000560521 TRAF5O00463 557 aa12.12□□□□□ -0.47
RABGGTA-217ENST00000560521 DIAPH1O60610 1272 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-217ENST00000560521 MAP2K2P36507 400 aa12.12□□□□□ -0.47
RABGGTA-217ENST00000560521 SCNN1DP51172 638 aa12.12□□□□□ -0.47
RABGGTA-217ENST00000560521 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-217ENST00000560521 JDP2Q8WYK2 163 aa12.12□□□□□ -0.47
RABGGTA-217ENST00000560521 CFAP44Q96MT7 982 aa12.12□□□□□ -0.47
RABGGTA-217ENST00000560521 PSMD1Q99460 953 aa12.12□□□□□ -0.47
RABGGTA-217ENST00000560521 FAM177BA6PVY3 158 aa12.11□□□□□ -0.47
RABGGTA-217ENST00000560521 HSPA5P11021 654 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-217ENST00000560521 LMOD1P29536 600 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-217ENST00000560521 EIF6P56537 245 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-217ENST00000560521 NIP7Q9Y221 180 aaKnown RBP eCLIP12.11□□□□□ -0.47
RABGGTA-217ENST00000560521 LAMB4A4D0S4 1761 aa12.1□□□□□ -0.47
RABGGTA-217ENST00000560521 CEMIPQ8WUJ3 1361 aa12.1□□□□□ -0.47
RABGGTA-217ENST00000560521 BTBD11A6QL63 1104 aa12.1□□□□□ -0.47
RABGGTA-217ENST00000560521 EIF4G2P78344 907 aaKnown RBP eCLIP12.1□□□□□ -0.47
RABGGTA-217ENST00000560521 USP50Q70EL3 339 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms