RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 EML1O00423 815 aa7.3□□□□□ -1.24
SPG11-222ENST00000560435 TEAD4Q15561 434 aa7.3□□□□□ -1.24
SPG11-222ENST00000560435 LRRC69Q6ZNQ3 347 aa7.3□□□□□ -1.24
SPG11-222ENST00000560435 GDPD2Q9HCC8 539 aa7.3□□□□□ -1.24
SPG11-222ENST00000560435 STARD13Q9Y3M8 1113 aa7.3□□□□□ -1.24
SPG11-222ENST00000560435 FAM229AH3BQW9 127 aa7.29□□□□□ -1.24
SPG11-222ENST00000560435 ALBP02768 609 aa7.29□□□□□ -1.24
SPG11-222ENST00000560435 ABL2P42684 1182 aa7.29□□□□□ -1.24
SPG11-222ENST00000560435 EML3Q32P44 896 aa7.29□□□□□ -1.24
SPG11-222ENST00000560435 L3MBTL2Q969R5 705 aa7.29□□□□□ -1.24
SPG11-222ENST00000560435 NOS2P35228 1153 aa7.28□□□□□ -1.24
SPG11-222ENST00000560435 TRIM28Q13263 835 aaKnown RBP7.28□□□□□ -1.24
SPG11-222ENST00000560435 ARTNQ5T4W7 220 aa7.28□□□□□ -1.24
SPG11-222ENST00000560435 MICALL1Q8N3F8 863 aa7.28□□□□□ -1.24
SPG11-222ENST00000560435 SLC30A3Q99726 388 aa7.28□□□□□ -1.24
SPG11-222ENST00000560435 ZFP64Q9NPA5 681 aa7.28□□□□□ -1.24
SPG11-222ENST00000560435 ZNF358Q9NW07 568 aa7.28□□□□□ -1.24
SPG11-222ENST00000560435 PIK3CDO00329 1044 aa7.27□□□□□ -1.25
SPG11-222ENST00000560435 LZTS3O60299 673 aaPredicted RBP7.27□□□□□ -1.25
SPG11-222ENST00000560435 NID1P14543 1247 aa7.27□□□□□ -1.25
SPG11-222ENST00000560435 ADH7P40394 386 aa7.27□□□□□ -1.25
SPG11-222ENST00000560435 EPHA4P54764 986 aa7.27□□□□□ -1.25
SPG11-222ENST00000560435 GTF2IP78347 998 aa7.27□□□□□ -1.25
SPG11-222ENST00000560435 SFSWAPQ12872 951 aaKnown RBP7.27□□□□□ -1.25
SPG11-222ENST00000560435 C7orf43Q8WVR3 580 aa7.27□□□□□ -1.25
SPG11-222ENST00000560435 NEUROD4Q9HD90 331 aa7.27□□□□□ -1.25
SPG11-222ENST00000560435 NOD1Q9Y239 953 aa7.27□□□□□ -1.25
SPG11-222ENST00000560435 SPEM2Q0P670 501 aa7.26□□□□□ -1.25
SPG11-222ENST00000560435 NEUROD1Q13562 356 aa7.26□□□□□ -1.25
SPG11-222ENST00000560435 PRSS36Q5K4E3 855 aa7.26□□□□□ -1.25
SPG11-222ENST00000560435 C8orf86Q6ZUL3 223 aa7.26□□□□□ -1.25
SPG11-222ENST00000560435 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.26□□□□□ -1.25
SPG11-222ENST00000560435 GRIK4Q16099 956 aa7.25□□□□□ -1.25
SPG11-222ENST00000560435 C20orf204Q6ZNR8 217 aa7.25□□□□□ -1.25
SPG11-222ENST00000560435 SLC9A9Q8IVB4 645 aa7.25□□□□□ -1.25
SPG11-222ENST00000560435 ZNF232Q9UNY5 417 aa7.25□□□□□ -1.25
SPG11-222ENST00000560435 SERTM1A2A2V5 107 aa7.24□□□□□ -1.25
SPG11-222ENST00000560435 C9orf172C9J069 976 aa7.24□□□□□ -1.25
SPG11-222ENST00000560435 SKIP12755 728 aa7.24□□□□□ -1.25
SPG11-222ENST00000560435 PSME1Q06323 249 aa7.24□□□□□ -1.25
SPG11-222ENST00000560435 KRTAP1-3Q8IUG1 177 aa7.24□□□□□ -1.25
SPG11-222ENST00000560435 NFATC2IPQ8NCF5 419 aa7.24□□□□□ -1.25
SPG11-222ENST00000560435 RHPN1Q8TCX5 695 aa7.24□□□□□ -1.25
SPG11-222ENST00000560435 H2AFB1P0C5Y9 115 aa7.23□□□□□ -1.25
SPG11-222ENST00000560435 H2AFB2P0C5Z0 115 aa7.23□□□□□ -1.25
SPG11-222ENST00000560435 KCNQ4P56696 695 aa7.23□□□□□ -1.25
SPG11-222ENST00000560435 ADGRE1Q14246 886 aa7.23□□□□□ -1.25
SPG11-222ENST00000560435 HIRAP54198 1017 aaPredicted RBP7.22□□□□□ -1.25
SPG11-222ENST00000560435 NCOA4Q13772 614 aa7.22□□□□□ -1.25
SPG11-222ENST00000560435 MBTPS1Q14703 1052 aa7.22□□□□□ -1.25
SPG11-222ENST00000560435 TBCELQ5QJ74 424 aa7.22□□□□□ -1.25
SPG11-222ENST00000560435 SH3PXD2AQ5TCZ1 1133 aa7.22□□□□□ -1.25
SPG11-222ENST00000560435 C1orf53Q5VUE5 145 aa7.22□□□□□ -1.25
SPG11-222ENST00000560435 RAB44Q7Z6P3 723 aaPredicted RBP7.22□□□□□ -1.25
SPG11-222ENST00000560435 NBPF11Q86T75 865 aa7.22□□□□□ -1.25
SPG11-222ENST00000560435 TNS4Q8IZW8 715 aa7.22□□□□□ -1.25
SPG11-222ENST00000560435 BRD7Q9NPI1 651 aa7.22□□□□□ -1.25
SPG11-222ENST00000560435 LILRB5O75023 590 aa7.21□□□□□ -1.26
SPG11-222ENST00000560435 ELNP15502 786 aa7.21□□□□□ -1.26
SPG11-222ENST00000560435 LRP8Q14114 963 aa7.21□□□□□ -1.26
SPG11-222ENST00000560435 TRAPPC3LQ5T215 181 aa7.21□□□□□ -1.26
SPG11-222ENST00000560435 KRTAP4-12Q9BQ66 201 aa7.21□□□□□ -1.26
SPG11-222ENST00000560435 ANKIB1Q9P2G1 1089 aa7.21□□□□□ -1.26
SPG11-222ENST00000560435 SELPP16109 830 aa7.2□□□□□ -1.26
SPG11-222ENST00000560435 PSMA6P60900 246 aaKnown RBP7.2□□□□□ -1.26
SPG11-222ENST00000560435 TYRO3Q06418 890 aa7.2□□□□□ -1.26
SPG11-222ENST00000560435 POTEAQ6S8J7 498 aa7.2□□□□□ -1.26
SPG11-222ENST00000560435 TXNRD3Q86VQ6 643 aa7.2□□□□□ -1.26
SPG11-222ENST00000560435 CEP63Q96MT8 703 aa7.2□□□□□ -1.26
SPG11-222ENST00000560435 ALG2Q9H553 416 aa7.2□□□□□ -1.26
SPG11-222ENST00000560435 KCNH4Q9UQ05 1017 aa7.2□□□□□ -1.26
SPG11-222ENST00000560435 A0A0A0MRY4 1105 aa7.19□□□□□ -1.26
SPG11-222ENST00000560435 NRG1Q02297 640 aaPredicted RBP7.19□□□□□ -1.26
SPG11-222ENST00000560435 LENG1Q96BZ8 264 aaPredicted RBP7.19□□□□□ -1.26
SPG11-222ENST00000560435 HSH2DQ96JZ2 352 aa7.19□□□□□ -1.26
SPG11-222ENST00000560435 USP17L5A8MUK1 530 aa7.18□□□□□ -1.26
SPG11-222ENST00000560435 RAC1P63000 192 aa7.18□□□□□ -1.26
SPG11-222ENST00000560435 MCM6Q14566 821 aa7.18□□□□□ -1.26
SPG11-222ENST00000560435 LCE3BQ5TA77 95 aa7.18□□□□□ -1.26
SPG11-222ENST00000560435 TRIM50Q86XT4 487 aa7.18□□□□□ -1.26
SPG11-222ENST00000560435 CHMP3Q9Y3E7 222 aa7.18□□□□□ -1.26
SPG11-222ENST00000560435 SFI1A8K8P3 1242 aa7.17□□□□□ -1.26
SPG11-222ENST00000560435 BHMTQ93088 406 aa7.17□□□□□ -1.26
SPG11-222ENST00000560435 SUSD3Q96L08 255 aa7.17□□□□□ -1.26
SPG11-222ENST00000560435 PHACTR1Q9C0D0 580 aa7.17□□□□□ -1.26
SPG11-222ENST00000560435 TSPAN10Q9H1Z9 355 aaPredicted RBP7.17□□□□□ -1.26
SPG11-222ENST00000560435 DEPDC4Q8N2C3 294 aa7.16□□□□□ -1.26
SPG11-222ENST00000560435 TPCN2Q8NHX9 752 aa7.16□□□□□ -1.26
SPG11-222ENST00000560435 UBE2OQ9C0C9 1292 aaKnown RBP7.16□□□□□ -1.26
SPG11-222ENST00000560435 EFCC1Q9HA90 598 aa7.16□□□□□ -1.26
SPG11-222ENST00000560435 JPH1Q9HDC5 661 aaPredicted RBP7.16□□□□□ -1.26
SPG11-222ENST00000560435 SLC6A14Q9UN76 642 aa7.16□□□□□ -1.26
SPG11-222ENST00000560435 COG6Q9Y2V7 657 aa7.16□□□□□ -1.26
SPG11-222ENST00000560435 HCN4Q9Y3Q4 1203 aa7.16□□□□□ -1.26
SPG11-222ENST00000560435 M0R2N6 131 aa7.15□□□□□ -1.26
SPG11-222ENST00000560435 ZBTB7BO15156 539 aaPredicted RBP7.15□□□□□ -1.26
SPG11-222ENST00000560435 ATP1A2P50993 1020 aa7.15□□□□□ -1.26
SPG11-222ENST00000560435 SHISA2Q6UWI4 295 aa7.15□□□□□ -1.26
SPG11-222ENST00000560435 ZNF280CQ8ND82 737 aa7.15□□□□□ -1.26
SPG11-222ENST00000560435 KIAA1024Q9UPX6 916 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms