RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, humanhuman

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-208ENST00000560328 CT47A1Q5JQC4 288 aaPredicted RBP10.95□□□□□ -0.66
NEO1-208ENST00000560328 ZHX3Q9H4I2 956 aa10.95□□□□□ -0.66
NEO1-208ENST00000560328 SSFA2P28290 1259 aa10.95□□□□□ -0.66
NEO1-208ENST00000560328 TMOD2Q9NZR1 351 aa10.95□□□□□ -0.66
NEO1-208ENST00000560328 CCDC196A0A1B0GTZ2 297 aa10.95□□□□□ -0.66
NEO1-208ENST00000560328 SYCE3A1L190 88 aa10.95□□□□□ -0.66
NEO1-208ENST00000560328 TOM1O60784 492 aa10.95□□□□□ -0.66
NEO1-208ENST00000560328 SLC12A7Q9Y666 1083 aa10.95□□□□□ -0.66
NEO1-208ENST00000560328 CAMK4Q16566 473 aa10.94□□□□□ -0.66
NEO1-208ENST00000560328 CEP57L1Q8IYX8 460 aa10.94□□□□□ -0.66
NEO1-208ENST00000560328 CCDC82Q8N4S0 544 aa10.94□□□□□ -0.66
NEO1-208ENST00000560328 C8orf76Q96K31 380 aa10.94□□□□□ -0.66
NEO1-208ENST00000560328 ATP6V1AP38606 617 aa10.94□□□□□ -0.66
NEO1-208ENST00000560328 GUCY1B3Q02153 619 aa10.94□□□□□ -0.66
NEO1-208ENST00000560328 LMBR1LQ6UX01 489 aa10.94□□□□□ -0.66
NEO1-208ENST00000560328 PRM3Q9NNZ6 103 aa10.94□□□□□ -0.66
NEO1-208ENST00000560328 NPC1L1Q9UHC9 1359 aa10.94□□□□□ -0.66
NEO1-208ENST00000560328 CCT2P78371 535 aaKnown RBP10.94□□□□□ -0.66
NEO1-208ENST00000560328 DDX46Q7L014 1031 aaKnown RBP10.94□□□□□ -0.66
NEO1-208ENST00000560328 IQCA1Q86XH1 822 aa10.94□□□□□ -0.66
NEO1-208ENST00000560328 C16orf71Q8IYS4 520 aaPredicted RBP10.94□□□□□ -0.66
NEO1-208ENST00000560328 RNF41Q9H4P4 317 aaPredicted RBP10.94□□□□□ -0.66
NEO1-208ENST00000560328 IFIT3O14879 490 aaKnown RBP10.94□□□□□ -0.66
NEO1-208ENST00000560328 IL13P35225 146 aa10.94□□□□□ -0.66
NEO1-208ENST00000560328 RFC4P35249 363 aa10.94□□□□□ -0.66
NEO1-208ENST00000560328 MAP3K11Q16584 847 aa10.94□□□□□ -0.66
NEO1-208ENST00000560328 CEP131Q9UPN4 1083 aa10.94□□□□□ -0.66
NEO1-208ENST00000560328 TNPO1Q92973 898 aaKnown RBP10.94□□□□□ -0.66
NEO1-208ENST00000560328 SCAND2PQ9GZW5 306 aaPredicted RBP10.94□□□□□ -0.66
NEO1-208ENST00000560328 EDC4Q6P2E9 1401 aaKnown RBP10.93□□□□□ -0.66
NEO1-208ENST00000560328 UBAP1LF5GYI3 381 aa10.93□□□□□ -0.66
NEO1-208ENST00000560328 CRACR2BQ8N4Y2 399 aaPredicted RBP10.93□□□□□ -0.66
NEO1-208ENST00000560328 CTCFLQ8NI51 663 aaPredicted RBP10.93□□□□□ -0.66
NEO1-208ENST00000560328 GOLGA8BA8MQT2 603 aa10.93□□□□□ -0.66
NEO1-208ENST00000560328 HMGN5P82970 282 aaKnown RBP10.93□□□□□ -0.66
NEO1-208ENST00000560328 ZNF444Q8N0Y2 327 aaPredicted RBP10.93□□□□□ -0.66
NEO1-208ENST00000560328 LINS1Q8NG48 757 aa10.93□□□□□ -0.66
NEO1-208ENST00000560328 DCAF5Q96JK2 942 aa10.93□□□□□ -0.66
NEO1-208ENST00000560328 ARGLU1Q9NWB6 273 aaPredicted RBP10.93□□□□□ -0.66
NEO1-208ENST00000560328 C6orf229H3BNL8 230 aa10.93□□□□□ -0.66
NEO1-208ENST00000560328 SSBP05455 408 aaKnown RBP eCLIP10.93□□□□□ -0.66
NEO1-208ENST00000560328 DDB1Q16531 1140 aa10.93□□□□□ -0.66
NEO1-208ENST00000560328 CCDC152Q4G0S7 254 aa10.93□□□□□ -0.66
NEO1-208ENST00000560328 RNMTO43148 476 aaKnown RBP10.93□□□□□ -0.66
NEO1-208ENST00000560328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.93□□□□□ -0.66
NEO1-208ENST00000560328 CCP110O43303 1012 aa10.92□□□□□ -0.66
NEO1-208ENST00000560328 HAND2P61296 217 aa10.92□□□□□ -0.66
NEO1-208ENST00000560328 PPFIBP1Q86W92 1011 aa10.92□□□□□ -0.66
NEO1-208ENST00000560328 ZBTB40Q9NUA8 1239 aa10.92□□□□□ -0.66
NEO1-208ENST00000560328 TMEM132AQ24JP5 1023 aa10.92□□□□□ -0.66
NEO1-208ENST00000560328 NEK1Q96PY6 1258 aa10.92□□□□□ -0.66
NEO1-208ENST00000560328 SEC63Q9UGP8 760 aaKnown RBP10.92□□□□□ -0.66
NEO1-208ENST00000560328 CWF19L2Q2TBE0 894 aaKnown RBP10.92□□□□□ -0.66
NEO1-208ENST00000560328 NBPF6Q5VWK0 638 aa10.92□□□□□ -0.66
NEO1-208ENST00000560328 CEP85Q6P2H3 762 aa10.92□□□□□ -0.66
NEO1-208ENST00000560328 NBPF5PQ86XG9 351 aaPredicted RBP10.92□□□□□ -0.66
NEO1-208ENST00000560328 NBPF4Q96M43 638 aa10.92□□□□□ -0.66
NEO1-208ENST00000560328 PA2G4Q9UQ80 394 aaKnown RBP10.92□□□□□ -0.66
NEO1-208ENST00000560328 GOLGA8AA7E2F4 631 aa10.92□□□□□ -0.66
NEO1-208ENST00000560328 CAGE1Q8TC20 777 aa10.92□□□□□ -0.66
NEO1-208ENST00000560328 ORAI2Q96SN7 254 aa10.92□□□□□ -0.66
NEO1-208ENST00000560328 BMP2KQ9NSY1 1161 aaPredicted RBP10.92□□□□□ -0.66
NEO1-208ENST00000560328 ZNF219Q9P2Y4 722 aaPredicted RBP10.92□□□□□ -0.66
NEO1-208ENST00000560328 UQCRFS1P1P0C7P4 283 aa10.92□□□□□ -0.66
NEO1-208ENST00000560328 GJB2P29033 226 aa10.92□□□□□ -0.66
NEO1-208ENST00000560328 ZNF76P36508 570 aa10.92□□□□□ -0.66
NEO1-208ENST00000560328 ZNHIT6Q9NWK9 470 aaKnown RBP10.92□□□□□ -0.66
NEO1-208ENST00000560328 NEO1Q92859 1461 aa10.91□□□□□ -0.66
NEO1-208ENST00000560328 DCTPP1Q9H773 170 aa10.91□□□□□ -0.66
NEO1-208ENST00000560328 HMG20BQ9P0W2 317 aa10.91□□□□□ -0.66
NEO1-208ENST00000560328 ODF2Q5BJF6 829 aa10.91□□□□□ -0.66
NEO1-208ENST00000560328 SLF2Q8IX21 1173 aa10.91□□□□□ -0.66
NEO1-208ENST00000560328 PHAXQ9H814 394 aaKnown RBP10.91□□□□□ -0.66
NEO1-208ENST00000560328 CBFA2T2O43439 604 aa10.91□□□□□ -0.66
NEO1-208ENST00000560328 SSRP1Q08945 709 aaKnown RBP10.91□□□□□ -0.66
NEO1-208ENST00000560328 C8orf37Q96NL8 207 aa10.91□□□□□ -0.66
NEO1-208ENST00000560328 SBNO1A3KN83 1393 aa10.91□□□□□ -0.66
NEO1-208ENST00000560328 IL15P40933 162 aaPredicted RBP10.91□□□□□ -0.66
NEO1-208ENST00000560328 DHX8Q14562 1220 aaKnown RBP10.91□□□□□ -0.66
NEO1-208ENST00000560328 ESYT1Q9BSJ8 1104 aa10.91□□□□□ -0.66
NEO1-208ENST00000560328 TANGO6Q9C0B7 1094 aa10.91□□□□□ -0.66
NEO1-208ENST00000560328 ARHGEF5Q12774 1597 aa10.9□□□□□ -0.66
NEO1-208ENST00000560328 ATP2B3Q16720 1220 aa10.9□□□□□ -0.66
NEO1-208ENST00000560328 SIRT1Q96EB6 747 aa10.9□□□□□ -0.66
NEO1-208ENST00000560328 SMARCC1Q92922 1105 aaPredicted RBP10.9□□□□□ -0.66
NEO1-208ENST00000560328 DCAF8L1A6NGE4 600 aa10.9□□□□□ -0.66
NEO1-208ENST00000560328 SMTNL1A8MU46 457 aa10.9□□□□□ -0.66
NEO1-208ENST00000560328 STX6O43752 255 aa10.9□□□□□ -0.66
NEO1-208ENST00000560328 TNNT3P45378 269 aaPredicted RBP10.9□□□□□ -0.66
NEO1-208ENST00000560328 CATIPQ7Z7H3 387 aa10.9□□□□□ -0.66
NEO1-208ENST00000560328 USP16Q9Y5T5 823 aa10.9□□□□□ -0.66
NEO1-208ENST00000560328 MBD5Q9P267 1494 aa10.9□□□□□ -0.66
NEO1-208ENST00000560328 TMEM67Q5HYA8 995 aa10.9□□□□□ -0.67
NEO1-208ENST00000560328 ZFYVE27Q5T4F4 411 aa10.9□□□□□ -0.67
NEO1-208ENST00000560328 CCDC183Q5T5S1 534 aa10.9□□□□□ -0.67
NEO1-208ENST00000560328 NCOA7Q8NI08 942 aa10.89□□□□□ -0.67
NEO1-208ENST00000560328 SETDB2Q96T68 719 aa10.89□□□□□ -0.67
NEO1-208ENST00000560328 NIP7Q9Y221 180 aaKnown RBP eCLIP10.89□□□□□ -0.67
NEO1-208ENST00000560328 ADGBQ8N7X0 1667 aa10.89□□□□□ -0.67
NEO1-208ENST00000560328 LDHCP07864 332 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms