RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 ZBTB3Q9H5J0 574 aa18.29■□□□□ 0.52
SMAD6-204ENST00000559931 NOB1Q9ULX3 412 aaKnown RBP18.29■□□□□ 0.52
SMAD6-204ENST00000559931 PNPLA7Q6ZV29 1317 aa18.28■□□□□ 0.52
SMAD6-204ENST00000559931 CASZ1Q86V15 1759 aa18.28■□□□□ 0.52
SMAD6-204ENST00000559931 IPO8O15397 1037 aaKnown RBP18.28■□□□□ 0.52
SMAD6-204ENST00000559931 LRP10Q7Z4F1 713 aa18.28■□□□□ 0.52
SMAD6-204ENST00000559931 SRP68Q9UHB9 627 aaKnown RBP18.27■□□□□ 0.52
SMAD6-204ENST00000559931 NARFQ9UHQ1 456 aa18.27■□□□□ 0.52
SMAD6-204ENST00000559931 KIF16BQ96L93 1317 aa18.26■□□□□ 0.51
SMAD6-204ENST00000559931 ZBTB7AO95365 584 aa18.26■□□□□ 0.51
SMAD6-204ENST00000559931 USPL1Q5W0Q7 1092 aa18.26■□□□□ 0.51
SMAD6-204ENST00000559931 KSR2Q6VAB6 950 aa18.26■□□□□ 0.51
SMAD6-204ENST00000559931 PLBD2Q8NHP8 589 aa18.26■□□□□ 0.51
SMAD6-204ENST00000559931 MAP3K15Q6ZN16 1313 aa18.25■□□□□ 0.51
SMAD6-204ENST00000559931 PI4KAP2A4QPH2 592 aa18.25■□□□□ 0.51
SMAD6-204ENST00000559931 BRPF1P55201 1214 aaPredicted RBP18.25■□□□□ 0.51
SMAD6-204ENST00000559931 PI4KAP1Q8N8J0 262 aa18.25■□□□□ 0.51
SMAD6-204ENST00000559931 ZNF652Q9Y2D9 606 aa18.25■□□□□ 0.51
SMAD6-204ENST00000559931 MAP3K2Q9Y2U5 619 aa18.25■□□□□ 0.51
SMAD6-204ENST00000559931 PTPRCP08575 1304 aa18.24■□□□□ 0.51
SMAD6-204ENST00000559931 ERVV-1B6SEH8 477 aa18.24■□□□□ 0.51
SMAD6-204ENST00000559931 CAMTA2O94983 1202 aa18.24■□□□□ 0.51
SMAD6-204ENST00000559931 ZKSCAN2Q63HK3 967 aa18.24■□□□□ 0.51
SMAD6-204ENST00000559931 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.24■□□□□ 0.51
SMAD6-204ENST00000559931 API5Q9BZZ5 524 aaKnown RBP18.24■□□□□ 0.51
SMAD6-204ENST00000559931 ATF5Q9Y2D1 282 aaPredicted RBP18.24■□□□□ 0.51
SMAD6-204ENST00000559931 USP42Q9H9J4 1324 aaKnown RBP18.23■□□□□ 0.51
SMAD6-204ENST00000559931 F6X3S4 739 aa18.23■□□□□ 0.51
SMAD6-204ENST00000559931 HLFQ16534 295 aa18.23■□□□□ 0.51
SMAD6-204ENST00000559931 SLC4A10Q6U841 1118 aa18.23■□□□□ 0.51
SMAD6-204ENST00000559931 NEXNQ0ZGT2 675 aa18.22■□□□□ 0.51
SMAD6-204ENST00000559931 BICDL1Q6ZP65 573 aa18.22■□□□□ 0.51
SMAD6-204ENST00000559931 ARHGAP45Q92619 1136 aa18.22■□□□□ 0.51
SMAD6-204ENST00000559931 C4AP0C0L4 1744 aa18.21■□□□□ 0.51
SMAD6-204ENST00000559931 PLIN1O60240 522 aa18.21■□□□□ 0.51
SMAD6-204ENST00000559931 HSP90AB3PQ58FF7 597 aa18.21■□□□□ 0.51
SMAD6-204ENST00000559931 CLEC4GQ6UXB4 293 aa18.21■□□□□ 0.51
SMAD6-204ENST00000559931 ATF7IPQ6VMQ6 1270 aa18.21■□□□□ 0.51
SMAD6-204ENST00000559931 GIGYF2Q6Y7W6 1299 aaKnown RBP18.21■□□□□ 0.51
SMAD6-204ENST00000559931 NLGN1Q8N2Q7 840 aa18.21■□□□□ 0.51
SMAD6-204ENST00000559931 DNAAF4Q8WXU2 420 aa18.21■□□□□ 0.51
SMAD6-204ENST00000559931 MYD88Q99836 296 aa18.21■□□□□ 0.51
SMAD6-204ENST00000559931 NUP98P52948 1817 aa18.21■□□□□ 0.51
SMAD6-204ENST00000559931 GYS1P13807 737 aa18.2■□□□□ 0.5
SMAD6-204ENST00000559931 TCIRG1Q13488 830 aa18.2■□□□□ 0.5
SMAD6-204ENST00000559931 FKBP8Q14318 412 aa18.2■□□□□ 0.5
SMAD6-204ENST00000559931 MSL1Q68DK7 614 aa18.2■□□□□ 0.5
SMAD6-204ENST00000559931 SLC16A10Q8TF71 515 aa18.2■□□□□ 0.5
SMAD6-204ENST00000559931 CLUAP1Q96AJ1 413 aa18.2■□□□□ 0.5
SMAD6-204ENST00000559931 METTL22Q9BUU2 404 aaPredicted RBP18.2■□□□□ 0.5
SMAD6-204ENST00000559931 SUPT16HQ9Y5B9 1047 aaKnown RBP18.2■□□□□ 0.5
SMAD6-204ENST00000559931 ADCY9O60503 1353 aa18.19■□□□□ 0.5
SMAD6-204ENST00000559931 ATP5J2-PTCD1G3V325 749 aa18.19■□□□□ 0.5
SMAD6-204ENST00000559931 GPTP24298 496 aa18.19■□□□□ 0.5
SMAD6-204ENST00000559931 FTSJ3Q8IY81 847 aaKnown RBP18.19■□□□□ 0.5
SMAD6-204ENST00000559931 SETDB2Q96T68 719 aa18.19■□□□□ 0.5
SMAD6-204ENST00000559931 MTFR1LQ9H019 292 aa18.19■□□□□ 0.5
SMAD6-204ENST00000559931 BCL2L12Q9HB09 334 aa18.19■□□□□ 0.5
SMAD6-204ENST00000559931 SPON1Q9HCB6 807 aa18.19■□□□□ 0.5
SMAD6-204ENST00000559931 NIP7Q9Y221 180 aaKnown RBP eCLIP18.19■□□□□ 0.5
SMAD6-204ENST00000559931 SRCAPQ6ZRS2 3230 aa18.19■□□□□ 0.5
SMAD6-204ENST00000559931 MS4A1P11836 297 aa18.18■□□□□ 0.5
SMAD6-204ENST00000559931 TRIM27P14373 513 aa18.18■□□□□ 0.5
SMAD6-204ENST00000559931 TBC1D9BQ66K14 1250 aa18.18■□□□□ 0.5
SMAD6-204ENST00000559931 ARFGEF2Q9Y6D5 1785 aa18.17■□□□□ 0.5
SMAD6-204ENST00000559931 FAM177BA6PVY3 158 aa18.17■□□□□ 0.5
SMAD6-204ENST00000559931 RGL2O15211 777 aa18.17■□□□□ 0.5
SMAD6-204ENST00000559931 DZIP1LQ8IYY4 767 aaKnown RBP18.17■□□□□ 0.5
SMAD6-204ENST00000559931 NPHP1O15259 732 aa18.16■□□□□ 0.5
SMAD6-204ENST00000559931 RRP1P56182 461 aaKnown RBP18.16■□□□□ 0.5
SMAD6-204ENST00000559931 TNNQ9UQP3 1299 aa18.16■□□□□ 0.5
SMAD6-204ENST00000559931 BCORQ6W2J9 1755 aa18.16■□□□□ 0.5
SMAD6-204ENST00000559931 NFIXQ14938 502 aa18.15■□□□□ 0.5
SMAD6-204ENST00000559931 ZNF34Q8IZ26 560 aa18.15■□□□□ 0.5
SMAD6-204ENST00000559931 LINS1Q8NG48 757 aa18.15■□□□□ 0.5
SMAD6-204ENST00000559931 SRCIN1Q9C0H9 1055 aa18.15■□□□□ 0.5
SMAD6-204ENST00000559931 SCN7AQ01118 1682 aa18.15■□□□□ 0.5
SMAD6-204ENST00000559931 LRP5O75197 1615 aa18.14■□□□□ 0.49
SMAD6-204ENST00000559931 MMP10P09238 476 aa18.14■□□□□ 0.49
SMAD6-204ENST00000559931 GTF2E1P29083 439 aaPredicted RBP18.14■□□□□ 0.49
SMAD6-204ENST00000559931 CCT4P50991 539 aaKnown RBP18.14■□□□□ 0.49
SMAD6-204ENST00000559931 CWF19L2Q2TBE0 894 aaKnown RBP18.14■□□□□ 0.49
SMAD6-204ENST00000559931 BEND3Q5T5X7 828 aa18.14■□□□□ 0.49
SMAD6-204ENST00000559931 PANK1Q8TE04 598 aa18.14■□□□□ 0.49
SMAD6-204ENST00000559931 PARP3Q9Y6F1 533 aa18.14■□□□□ 0.49
SMAD6-204ENST00000559931 TM4SF1P30408 202 aa18.13■□□□□ 0.49
SMAD6-204ENST00000559931 PTGER2P43116 358 aa18.13■□□□□ 0.49
SMAD6-204ENST00000559931 PARP10Q53GL7 1025 aa18.13■□□□□ 0.49
SMAD6-204ENST00000559931 PPP1R42Q7Z4L9 355 aa18.13■□□□□ 0.49
SMAD6-204ENST00000559931 NLRP10Q86W26 655 aa18.13■□□□□ 0.49
SMAD6-204ENST00000559931 NBPF5PQ86XG9 351 aaPredicted RBP18.13■□□□□ 0.49
SMAD6-204ENST00000559931 ISCA1Q9BUE6 129 aa18.13■□□□□ 0.49
SMAD6-204ENST00000559931 CWC25Q9NXE8 425 aaPredicted RBP18.13■□□□□ 0.49
SMAD6-204ENST00000559931 PPP1R1BQ9UD71 204 aaPredicted RBP18.13■□□□□ 0.49
SMAD6-204ENST00000559931 ANKRD36CQ5JPF3 1778 aa18.12■□□□□ 0.49
SMAD6-204ENST00000559931 AFDNP55196 1824 aaKnown RBP18.12■□□□□ 0.49
SMAD6-204ENST00000559931 NEURL1BA8MQ27 555 aa18.12■□□□□ 0.49
SMAD6-204ENST00000559931 ALDH1L1O75891 902 aa18.12■□□□□ 0.49
SMAD6-204ENST00000559931 IGKV5-2P06315 115 aa18.12■□□□□ 0.49
SMAD6-204ENST00000559931 POLD1P28340 1107 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms