RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 MAP3K5Q99683 1374 aa11.41□□□□□ -0.58
CTDSPL2-208ENST00000559793 IRF6O14896 467 aa11.41□□□□□ -0.58
CTDSPL2-208ENST00000559793 ZMYND10O75800 440 aa11.41□□□□□ -0.58
CTDSPL2-208ENST00000559793 KCNQ4P56696 695 aa11.41□□□□□ -0.58
CTDSPL2-208ENST00000559793 C1QTNF8P60827 252 aa11.41□□□□□ -0.58
CTDSPL2-208ENST00000559793 IP6K1Q92551 441 aa11.41□□□□□ -0.58
CTDSPL2-208ENST00000559793 PPP4CP60510 307 aa11.4□□□□□ -0.58
CTDSPL2-208ENST00000559793 GPR162Q16538 588 aa11.4□□□□□ -0.58
CTDSPL2-208ENST00000559793 HDGFL2Q7Z4V5 671 aaPredicted RBP11.4□□□□□ -0.58
CTDSPL2-208ENST00000559793 SLC16A10Q8TF71 515 aa11.4□□□□□ -0.58
CTDSPL2-208ENST00000559793 LTV1Q96GA3 475 aaPredicted RBP11.4□□□□□ -0.58
CTDSPL2-208ENST00000559793 PNPLA7Q6ZV29 1317 aa11.39□□□□□ -0.59
CTDSPL2-208ENST00000559793 FBLN1P23142 703 aa11.39□□□□□ -0.59
CTDSPL2-208ENST00000559793 SLC27A3Q5K4L6 730 aa11.39□□□□□ -0.59
CTDSPL2-208ENST00000559793 NYAP1Q6ZVC0 841 aa11.39□□□□□ -0.59
CTDSPL2-208ENST00000559793 SLF2Q8IX21 1173 aa11.39□□□□□ -0.59
CTDSPL2-208ENST00000559793 CARD11Q9BXL7 1154 aa11.39□□□□□ -0.59
CTDSPL2-208ENST00000559793 SENP3-EIF4A1A0A087X0R7 540 aa11.38□□□□□ -0.59
CTDSPL2-208ENST00000559793 PHOX2BQ99453 314 aa11.38□□□□□ -0.59
CTDSPL2-208ENST00000559793 TERF2IPQ9NYB0 399 aa11.38□□□□□ -0.59
CTDSPL2-208ENST00000559793 COL24A1Q17RW2 1714 aa11.38□□□□□ -0.59
CTDSPL2-208ENST00000559793 EDC4Q6P2E9 1401 aaKnown RBP11.37□□□□□ -0.59
CTDSPL2-208ENST00000559793 POLD1P28340 1107 aa11.37□□□□□ -0.59
CTDSPL2-208ENST00000559793 SYTL4Q96C24 671 aaPredicted RBP11.37□□□□□ -0.59
CTDSPL2-208ENST00000559793 PUS7Q96PZ0 661 aaKnown RBP11.37□□□□□ -0.59
CTDSPL2-208ENST00000559793 TFCP2L1Q9NZI6 479 aa11.37□□□□□ -0.59
CTDSPL2-208ENST00000559793 A0A1W2PP64 1363 aa11.37□□□□□ -0.59
CTDSPL2-208ENST00000559793 QSER1Q2KHR3 1735 aa11.37□□□□□ -0.59
CTDSPL2-208ENST00000559793 RGPD2P0DJD1 1756 aa11.36□□□□□ -0.59
CTDSPL2-208ENST00000559793 RNF40O75150 1001 aa11.36□□□□□ -0.59
CTDSPL2-208ENST00000559793 SLC4A3P48751 1232 aa11.36□□□□□ -0.59
CTDSPL2-208ENST00000559793 NLGN2Q8NFZ4 835 aa11.36□□□□□ -0.59
CTDSPL2-208ENST00000559793 TUBGCP6Q96RT7 1819 aa11.36□□□□□ -0.59
CTDSPL2-208ENST00000559793 HOXC9P31274 260 aa11.35□□□□□ -0.59
CTDSPL2-208ENST00000559793 ZCRB1Q8TBF4 217 aaKnown RBP11.35□□□□□ -0.59
CTDSPL2-208ENST00000559793 CCDC102AQ96A19 550 aa11.35□□□□□ -0.59
CTDSPL2-208ENST00000559793 ANKRD36BQ8N2N9 1353 aa11.35□□□□□ -0.59
CTDSPL2-208ENST00000559793 MAP3K19Q56UN5 1328 aa11.35□□□□□ -0.59
CTDSPL2-208ENST00000559793 NSD2O96028 1365 aa11.34□□□□□ -0.59
CTDSPL2-208ENST00000559793 COL23A1Q86Y22 540 aaPredicted RBP11.34□□□□□ -0.59
CTDSPL2-208ENST00000559793 KRI1Q8N9T8 703 aaKnown RBP11.34□□□□□ -0.59
CTDSPL2-208ENST00000559793 NECTIN2Q92692 538 aa11.34□□□□□ -0.59
CTDSPL2-208ENST00000559793 LY75O60449 1722 aa11.34□□□□□ -0.59
CTDSPL2-208ENST00000559793 GOLGB1Q14789 3259 aaKnown RBP11.33□□□□□ -0.6
CTDSPL2-208ENST00000559793 YBX3P16989 372 aaKnown RBP eCLIP11.33□□□□□ -0.6
CTDSPL2-208ENST00000559793 AMPHP49418 695 aa11.33□□□□□ -0.6
CTDSPL2-208ENST00000559793 NBPF6Q5VWK0 638 aa11.33□□□□□ -0.6
CTDSPL2-208ENST00000559793 NLRP7Q8WX94 980 aa11.33□□□□□ -0.6
CTDSPL2-208ENST00000559793 COG3Q96JB2 828 aa11.33□□□□□ -0.6
CTDSPL2-208ENST00000559793 NBPF4Q96M43 638 aa11.33□□□□□ -0.6
CTDSPL2-208ENST00000559793 DAXXQ9UER7 740 aaPredicted RBP11.33□□□□□ -0.6
CTDSPL2-208ENST00000559793 CCNL1Q9UK58 526 aaPredicted RBP11.33□□□□□ -0.6
CTDSPL2-208ENST00000559793 FAM208AQ9UK61 1670 aaKnown RBP11.33□□□□□ -0.6
CTDSPL2-208ENST00000559793 DOT1LQ8TEK3 1739 aa11.32□□□□□ -0.6
CTDSPL2-208ENST00000559793 SHANK3Q9BYB0 1731 aa11.32□□□□□ -0.6
CTDSPL2-208ENST00000559793 TESK2Q96S53 571 aa11.32□□□□□ -0.6
CTDSPL2-208ENST00000559793 MEGF6O75095 1541 aa11.31□□□□□ -0.6
CTDSPL2-208ENST00000559793 ST20-MTHFSA0A0A6YYL1 179 aa11.31□□□□□ -0.6
CTDSPL2-208ENST00000559793 GIGYF1O75420 1035 aaPredicted RBP11.31□□□□□ -0.6
CTDSPL2-208ENST00000559793 RRS1Q15050 365 aaKnown RBP11.31□□□□□ -0.6
CTDSPL2-208ENST00000559793 FYB1O15117 783 aa11.3□□□□□ -0.6
CTDSPL2-208ENST00000559793 GRIN3BO60391 1043 aa11.3□□□□□ -0.6
CTDSPL2-208ENST00000559793 USHBP1Q8N6Y0 703 aa11.3□□□□□ -0.6
CTDSPL2-208ENST00000559793 PLA2G2EQ9NZK7 142 aa11.3□□□□□ -0.6
CTDSPL2-208ENST00000559793 USP47Q96K76 1375 aa11.29□□□□□ -0.6
CTDSPL2-208ENST00000559793 SLC10A3P09131 477 aa11.29□□□□□ -0.6
CTDSPL2-208ENST00000559793 APLP1P51693 650 aa11.29□□□□□ -0.6
CTDSPL2-208ENST00000559793 MSL1Q68DK7 614 aa11.29□□□□□ -0.6
CTDSPL2-208ENST00000559793 GGNBP2Q9H3C7 697 aa11.28□□□□□ -0.6
CTDSPL2-208ENST00000559793 CGNL1Q0VF96 1302 aa11.28□□□□□ -0.6
CTDSPL2-208ENST00000559793 HSP90AB2PQ58FF8 381 aa11.27□□□□□ -0.61
CTDSPL2-208ENST00000559793 MPRIPQ6WCQ1 1025 aa11.27□□□□□ -0.61
CTDSPL2-208ENST00000559793 RAPGEF4Q8WZA2 1011 aa11.27□□□□□ -0.61
CTDSPL2-208ENST00000559793 CD2APQ9Y5K6 639 aa11.27□□□□□ -0.61
CTDSPL2-208ENST00000559793 TAF1LQ8IZX4 1826 aa11.26□□□□□ -0.61
CTDSPL2-208ENST00000559793 CYP27B1O15528 508 aa11.26□□□□□ -0.61
CTDSPL2-208ENST00000559793 ITGBL1O95965 494 aaPredicted RBP11.26□□□□□ -0.61
CTDSPL2-208ENST00000559793 TATP17735 454 aaPredicted RBP11.26□□□□□ -0.61
CTDSPL2-208ENST00000559793 TONSLQ96HA7 1378 aa11.26□□□□□ -0.61
CTDSPL2-208ENST00000559793 C5P01031 1676 aa11.25□□□□□ -0.61
CTDSPL2-208ENST00000559793 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
CTDSPL2-208ENST00000559793 SMIM5Q71RC9 77 aa11.25□□□□□ -0.61
CTDSPL2-208ENST00000559793 AMIGO3Q86WK7 504 aa11.25□□□□□ -0.61
CTDSPL2-208ENST00000559793 FLAD1Q8NFF5 587 aa11.25□□□□□ -0.61
CTDSPL2-208ENST00000559793 PRR14Q9BWN1 585 aa11.25□□□□□ -0.61
CTDSPL2-208ENST00000559793 RTL1A6NKG5 1358 aa11.25□□□□□ -0.61
CTDSPL2-208ENST00000559793 ITGB4P16144 1822 aa11.24□□□□□ -0.61
CTDSPL2-208ENST00000559793 DDX11L8A8MPP1 907 aa11.24□□□□□ -0.61
CTDSPL2-208ENST00000559793 IFFO2Q5TF58 517 aa11.24□□□□□ -0.61
CTDSPL2-208ENST00000559793 CEP350Q5VT06 3117 aa11.24□□□□□ -0.61
CTDSPL2-208ENST00000559793 CFHP08603 1231 aa11.23□□□□□ -0.61
CTDSPL2-208ENST00000559793 HMGB2P26583 209 aaKnown RBP11.23□□□□□ -0.61
CTDSPL2-208ENST00000559793 KMT5BQ4FZB7 885 aa11.23□□□□□ -0.61
CTDSPL2-208ENST00000559793 SULF1Q8IWU6 871 aa11.23□□□□□ -0.61
CTDSPL2-208ENST00000559793 PCDH11XQ9BZA7 1347 aa11.23□□□□□ -0.61
CTDSPL2-208ENST00000559793 PCDH11YQ9BZA8 1340 aa11.23□□□□□ -0.61
CTDSPL2-208ENST00000559793 INSRP06213 1382 aa11.23□□□□□ -0.61
CTDSPL2-208ENST00000559793 PALLDQ8WX93 1383 aa11.23□□□□□ -0.61
CTDSPL2-208ENST00000559793 ATP10DQ9P241 1426 aa11.23□□□□□ -0.61
CTDSPL2-208ENST00000559793 TJAP1Q5JTD0 557 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms