RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 RBM46Q8TBY0 533 aaKnown RBP24.99■■□□□ 1.59
CDC42BPB-206ENST00000559790 SETDB2Q96T68 719 aa24.99■■□□□ 1.59
CDC42BPB-206ENST00000559790 SNED1Q8TER0 1413 aa24.98■■□□□ 1.59
CDC42BPB-206ENST00000559790 KDM2BQ8NHM5 1336 aa24.98■■□□□ 1.59
CDC42BPB-206ENST00000559790 PDE6BP35913 854 aa24.98■■□□□ 1.59
CDC42BPB-206ENST00000559790 NFE2L2Q16236 605 aa24.98■■□□□ 1.59
CDC42BPB-206ENST00000559790 CLEC4GQ6UXB4 293 aa24.98■■□□□ 1.59
CDC42BPB-206ENST00000559790 DNAJC5GQ8N7S2 189 aa24.97■■□□□ 1.59
CDC42BPB-206ENST00000559790 ABCC12Q96J65 1359 aa24.96■■□□□ 1.59
CDC42BPB-206ENST00000559790 LTBP3Q9NS15 1303 aa24.96■■□□□ 1.59
CDC42BPB-206ENST00000559790 RGL2O15211 777 aa24.96■■□□□ 1.59
CDC42BPB-206ENST00000559790 C21orf2O43822 256 aa24.96■■□□□ 1.59
CDC42BPB-206ENST00000559790 HLFQ16534 295 aa24.96■■□□□ 1.59
CDC42BPB-206ENST00000559790 ZNF622Q969S3 477 aaKnown RBP eCLIP24.96■■□□□ 1.59
CDC42BPB-206ENST00000559790 RRAGCQ9HB90 399 aa24.96■■□□□ 1.59
CDC42BPB-206ENST00000559790 EIF4A1P60842 406 aaKnown RBP24.95■■□□□ 1.58
CDC42BPB-206ENST00000559790 PDZRN3Q9UPQ7 1066 aa24.95■■□□□ 1.58
CDC42BPB-206ENST00000559790 KLRG2A4D1S0 409 aaPredicted RBP24.94■■□□□ 1.58
CDC42BPB-206ENST00000559790 POTECB2RU33 542 aa24.94■■□□□ 1.58
CDC42BPB-206ENST00000559790 STYK1Q6J9G0 422 aa24.94■■□□□ 1.58
CDC42BPB-206ENST00000559790 PRPF40BQ6NWY9 871 aaKnown RBP24.94■■□□□ 1.58
CDC42BPB-206ENST00000559790 C7orf43Q8WVR3 580 aa24.94■■□□□ 1.58
CDC42BPB-206ENST00000559790 GLTPD2A6NH11 291 aa24.93■■□□□ 1.58
CDC42BPB-206ENST00000559790 APLP1P51693 650 aa24.93■■□□□ 1.58
CDC42BPB-206ENST00000559790 ZNF219Q9P2Y4 722 aaPredicted RBP24.93■■□□□ 1.58
CDC42BPB-206ENST00000559790 SCN4AP35499 1836 aa24.93■■□□□ 1.58
CDC42BPB-206ENST00000559790 ADAMTSL1Q8N6G6 1762 aa24.91■■□□□ 1.58
CDC42BPB-206ENST00000559790 ST5P78524 1137 aa24.91■■□□□ 1.58
CDC42BPB-206ENST00000559790 HTRA3P83110 453 aa24.91■■□□□ 1.58
CDC42BPB-206ENST00000559790 LRP10Q7Z4F1 713 aa24.91■■□□□ 1.58
CDC42BPB-206ENST00000559790 NBPF5PQ86XG9 351 aaPredicted RBP24.91■■□□□ 1.58
CDC42BPB-206ENST00000559790 COL4A5P29400 1685 aa24.91■■□□□ 1.58
CDC42BPB-206ENST00000559790 RIC1Q4ADV7 1423 aa24.9■■□□□ 1.58
CDC42BPB-206ENST00000559790 MASTLQ96GX5 879 aa24.9■■□□□ 1.58
CDC42BPB-206ENST00000559790 NIP7Q9Y221 180 aaKnown RBP eCLIP24.9■■□□□ 1.58
CDC42BPB-206ENST00000559790 UBN2Q6ZU65 1347 aa24.89■■□□□ 1.58
CDC42BPB-206ENST00000559790 FSTL1Q12841 308 aa24.89■■□□□ 1.58
CDC42BPB-206ENST00000559790 TTLL7Q6ZT98 887 aa24.89■■□□□ 1.58
CDC42BPB-206ENST00000559790 ZNF652Q9Y2D9 606 aa24.89■■□□□ 1.58
CDC42BPB-206ENST00000559790 PCNTO95613 3336 aa24.88■■□□□ 1.57
CDC42BPB-206ENST00000559790 PNISRQ8TF01 805 aaKnown RBP24.88■■□□□ 1.57
CDC42BPB-206ENST00000559790 CNKSR1Q969H4 720 aa24.88■■□□□ 1.57
CDC42BPB-206ENST00000559790 TAF1P21675 1872 aa24.87■■□□□ 1.57
CDC42BPB-206ENST00000559790 OLFM4Q6UX06 510 aa24.87■■□□□ 1.57
CDC42BPB-206ENST00000559790 NPM2Q86SE8 214 aaKnown RBP24.87■■□□□ 1.57
CDC42BPB-206ENST00000559790 IBTKQ9P2D0 1353 aaPredicted RBP24.87■■□□□ 1.57
CDC42BPB-206ENST00000559790 MAP3K15Q6ZN16 1313 aa24.86■■□□□ 1.57
CDC42BPB-206ENST00000559790 TAOK3Q9H2K8 898 aa24.86■■□□□ 1.57
CDC42BPB-206ENST00000559790 PDIA6Q15084 440 aa24.85■■□□□ 1.57
CDC42BPB-206ENST00000559790 RALBP1Q15311 655 aa24.85■■□□□ 1.57
CDC42BPB-206ENST00000559790 SLC51AQ86UW1 340 aa24.85■■□□□ 1.57
CDC42BPB-206ENST00000559790 DDX60Q8IY21 1712 aaKnown RBP24.85■■□□□ 1.57
CDC42BPB-206ENST00000559790 MAPK8IP3Q9UPT6 1336 aa24.85■■□□□ 1.57
CDC42BPB-206ENST00000559790 ERVV-1B6SEH8 477 aa24.84■■□□□ 1.57
CDC42BPB-206ENST00000559790 NPR1P16066 1061 aa24.84■■□□□ 1.57
CDC42BPB-206ENST00000559790 CRY2Q49AN0 593 aa24.84■■□□□ 1.57
CDC42BPB-206ENST00000559790 C16orf71Q8IYS4 520 aaPredicted RBP24.84■■□□□ 1.57
CDC42BPB-206ENST00000559790 LTBP1Q14766 1721 aa24.83■■□□□ 1.57
CDC42BPB-206ENST00000559790 FAM177BA6PVY3 158 aa24.83■■□□□ 1.57
CDC42BPB-206ENST00000559790 ERFEQ4G0M1 354 aa24.83■■□□□ 1.57
CDC42BPB-206ENST00000559790 NPHP1O15259 732 aa24.82■■□□□ 1.56
CDC42BPB-206ENST00000559790 VEGFAP15692 232 aaPredicted RBP24.82■■□□□ 1.56
CDC42BPB-206ENST00000559790 TMPOP42166 694 aaKnown RBP24.82■■□□□ 1.56
CDC42BPB-206ENST00000559790 PROSER3Q2NL68 480 aa24.82■■□□□ 1.56
CDC42BPB-206ENST00000559790 NGEFQ8N5V2 710 aa24.82■■□□□ 1.56
CDC42BPB-206ENST00000559790 MYBBP1AQ9BQG0 1328 aaKnown RBP24.82■■□□□ 1.56
CDC42BPB-206ENST00000559790 NEFMP07197 916 aa24.81■■□□□ 1.56
CDC42BPB-206ENST00000559790 MYL6BP14649 208 aa24.81■■□□□ 1.56
CDC42BPB-206ENST00000559790 TPTE2Q6XPS3 522 aa24.81■■□□□ 1.56
CDC42BPB-206ENST00000559790 NUTM1Q86Y26 1132 aa24.81■■□□□ 1.56
CDC42BPB-206ENST00000559790 SMC1BQ8NDV3 1235 aa24.81■■□□□ 1.56
CDC42BPB-206ENST00000559790 RRP7AQ9Y3A4 280 aaKnown RBP24.81■■□□□ 1.56
CDC42BPB-206ENST00000559790 ERBB4Q15303 1308 aa24.81■■□□□ 1.56
CDC42BPB-206ENST00000559790 DDX10Q13206 875 aaKnown RBP24.8■■□□□ 1.56
CDC42BPB-206ENST00000559790 ZBTB3Q9H5J0 574 aa24.8■■□□□ 1.56
CDC42BPB-206ENST00000559790 LRRC37AA6NMS7 1700 aa24.79■■□□□ 1.56
CDC42BPB-206ENST00000559790 RIPK4P57078 832 aa24.79■■□□□ 1.56
CDC42BPB-206ENST00000559790 CCDC93Q567U6 631 aa24.79■■□□□ 1.56
CDC42BPB-206ENST00000559790 ZNF34Q8IZ26 560 aa24.79■■□□□ 1.56
CDC42BPB-206ENST00000559790 NTSR2O95665 410 aa24.78■■□□□ 1.56
CDC42BPB-206ENST00000559790 POTEIP0CG38 1075 aa24.78■■□□□ 1.56
CDC42BPB-206ENST00000559790 POTEJP0CG39 1038 aa24.78■■□□□ 1.56
CDC42BPB-206ENST00000559790 SOGA3Q5TF21 947 aa24.78■■□□□ 1.56
CDC42BPB-206ENST00000559790 C3orf67Q6ZVT6 689 aa24.78■■□□□ 1.56
CDC42BPB-206ENST00000559790 TSPYL4Q9UJ04 414 aa24.78■■□□□ 1.56
CDC42BPB-206ENST00000559790 ZNF541Q9H0D2 1346 aa24.78■■□□□ 1.56
CDC42BPB-206ENST00000559790 COL4A1P02462 1669 aa24.78■■□□□ 1.56
CDC42BPB-206ENST00000559790 DDNO94850 711 aaPredicted RBP24.77■■□□□ 1.56
CDC42BPB-206ENST00000559790 ANXA1P04083 346 aa24.77■■□□□ 1.56
CDC42BPB-206ENST00000559790 GPTP24298 496 aa24.77■■□□□ 1.56
CDC42BPB-206ENST00000559790 SUSD4Q5VX71 490 aa24.77■■□□□ 1.56
CDC42BPB-206ENST00000559790 JMYQ8N9B5 988 aa24.77■■□□□ 1.56
CDC42BPB-206ENST00000559790 KLRG1Q96E93 195 aa24.77■■□□□ 1.56
CDC42BPB-206ENST00000559790 TRIM35Q9UPQ4 493 aa24.77■■□□□ 1.56
CDC42BPB-206ENST00000559790 FKBP4Q02790 459 aaKnown RBP eCLIP24.76■■□□□ 1.55
CDC42BPB-206ENST00000559790 KRT24Q2M2I5 525 aa24.76■■□□□ 1.55
CDC42BPB-206ENST00000559790 GIGYF2Q6Y7W6 1299 aaKnown RBP24.76■■□□□ 1.55
CDC42BPB-206ENST00000559790 CCDC146Q8IYE0 955 aa24.76■■□□□ 1.55
CDC42BPB-206ENST00000559790 PNNQ9H307 717 aaKnown RBP24.76■■□□□ 1.55
CDC42BPB-206ENST00000559790 KIF6Q6ZMV9 814 aa24.75■■□□□ 1.55
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