RNA–Protein interactions for RNA: ENST00000559289.1

SHC4-206, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-206ENST00000559289 COL23A1Q86Y22 540 aaPredicted RBP7.63□□□□□ -1.19
SHC4-206ENST00000559289 ARHGEF1Q92888 912 aaKnown RBP7.63□□□□□ -1.19
SHC4-206ENST00000559289 ZNF428Q96B54 188 aa7.63□□□□□ -1.19
SHC4-206ENST00000559289 BCL2L13Q9BXK5 485 aa7.63□□□□□ -1.19
SHC4-206ENST00000559289 STK32BQ9NY57 414 aa7.63□□□□□ -1.19
SHC4-206ENST00000559289 RTCBQ9Y3I0 505 aaKnown RBP7.63□□□□□ -1.19
SHC4-206ENST00000559289 ANKRD36CQ5JPF3 1778 aa7.63□□□□□ -1.19
SHC4-206ENST00000559289 N4BP2Q86UW6 1770 aaPredicted RBP7.62□□□□□ -1.19
SHC4-206ENST00000559289 PHF14O94880 888 aa7.62□□□□□ -1.19
SHC4-206ENST00000559289 CAMTA2O94983 1202 aa7.62□□□□□ -1.19
SHC4-206ENST00000559289 SLC4A2P04920 1241 aa7.62□□□□□ -1.19
SHC4-206ENST00000559289 COPS6Q7L5N1 327 aa7.62□□□□□ -1.19
SHC4-206ENST00000559289 XAGE3Q8WTP9 111 aa7.62□□□□□ -1.19
SHC4-206ENST00000559289 BCL2L12Q9HB09 334 aa7.62□□□□□ -1.19
SHC4-206ENST00000559289 HYPKQ9NX55 129 aa7.62□□□□□ -1.19
SHC4-206ENST00000559289 TFCP2L1Q9NZI6 479 aa7.62□□□□□ -1.19
SHC4-206ENST00000559289 SRP68Q9UHB9 627 aaKnown RBP7.62□□□□□ -1.19
SHC4-206ENST00000559289 ADCY9O60503 1353 aa7.61□□□□□ -1.19
SHC4-206ENST00000559289 USP42Q9H9J4 1324 aaKnown RBP7.61□□□□□ -1.19
SHC4-206ENST00000559289 HMGB2P26583 209 aaKnown RBP7.61□□□□□ -1.19
SHC4-206ENST00000559289 AIMP1Q12904 312 aaKnown RBP7.61□□□□□ -1.19
SHC4-206ENST00000559289 FLIIQ13045 1269 aa7.61□□□□□ -1.19
SHC4-206ENST00000559289 R3HDM1Q15032 1099 aaKnown RBP7.61□□□□□ -1.19
SHC4-206ENST00000559289 HLFQ16534 295 aa7.61□□□□□ -1.19
SHC4-206ENST00000559289 TRAPPC3LQ5T215 181 aa7.61□□□□□ -1.19
SHC4-206ENST00000559289 DZIP3Q86Y13 1208 aaKnown RBP7.61□□□□□ -1.19
SHC4-206ENST00000559289 STK31Q9BXU1 1019 aa7.61□□□□□ -1.19
SHC4-206ENST00000559289 SMC4Q9NTJ3 1288 aa7.61□□□□□ -1.19
SHC4-206ENST00000559289 RCAN3Q9UKA8 241 aa7.61□□□□□ -1.19
SHC4-206ENST00000559289 TBC1D2BQ9UPU7 963 aa7.61□□□□□ -1.19
SHC4-206ENST00000559289 TNNQ9UQP3 1299 aa7.61□□□□□ -1.19
SHC4-206ENST00000559289 ZNF330Q9Y3S2 320 aaPredicted RBP7.61□□□□□ -1.19
SHC4-206ENST00000559289 MAP3K15Q6ZN16 1313 aa7.6□□□□□ -1.19
SHC4-206ENST00000559289 AFDNP55196 1824 aaKnown RBP7.6□□□□□ -1.19
SHC4-206ENST00000559289 GYS1P13807 737 aa7.6□□□□□ -1.19
SHC4-206ENST00000559289 USPL1Q5W0Q7 1092 aa7.6□□□□□ -1.19
SHC4-206ENST00000559289 SAMD1Q6SPF0 538 aaPredicted RBP7.6□□□□□ -1.19
SHC4-206ENST00000559289 PELP1Q8IZL8 1130 aaKnown RBP7.6□□□□□ -1.19
SHC4-206ENST00000559289 CHMP4AQ9BY43 222 aa7.6□□□□□ -1.19
SHC4-206ENST00000559289 NARFQ9UHQ1 456 aa7.6□□□□□ -1.19
SHC4-206ENST00000559289 NOB1Q9ULX3 412 aaKnown RBP7.6□□□□□ -1.19
SHC4-206ENST00000559289 NRXN2Q9P2S2 1712 aa7.6□□□□□ -1.19
SHC4-206ENST00000559289 A0A087WZG4 1122 aa7.59□□□□□ -1.19
SHC4-206ENST00000559289 PI4KAP2A4QPH2 592 aa7.59□□□□□ -1.19
SHC4-206ENST00000559289 PSDA5PKW4 1024 aaPredicted RBP7.59□□□□□ -1.19
SHC4-206ENST00000559289 ERVV-1B6SEH8 477 aa7.59□□□□□ -1.19
SHC4-206ENST00000559289 RFC4P35249 363 aa7.59□□□□□ -1.19
SHC4-206ENST00000559289 GIGYF2Q6Y7W6 1299 aaKnown RBP7.59□□□□□ -1.19
SHC4-206ENST00000559289 ANKRD13DQ6ZTN6 518 aa7.59□□□□□ -1.19
SHC4-206ENST00000559289 PI4KAP1Q8N8J0 262 aa7.59□□□□□ -1.19
SHC4-206ENST00000559289 FLAD1Q8NFF5 587 aa7.59□□□□□ -1.19
SHC4-206ENST00000559289 PLBD2Q8NHP8 589 aa7.59□□□□□ -1.19
SHC4-206ENST00000559289 ZBTB3Q9H5J0 574 aa7.59□□□□□ -1.19
SHC4-206ENST00000559289 RNF123Q5XPI4 1314 aa7.58□□□□□ -1.2
SHC4-206ENST00000559289 F6X3S4 739 aa7.58□□□□□ -1.2
SHC4-206ENST00000559289 RGL2O15211 777 aa7.58□□□□□ -1.2
SHC4-206ENST00000559289 TRIM27P14373 513 aa7.58□□□□□ -1.2
SHC4-206ENST00000559289 FKBP5Q13451 457 aaPredicted RBP7.58□□□□□ -1.2
SHC4-206ENST00000559289 FKBP8Q14318 412 aa7.58□□□□□ -1.2
SHC4-206ENST00000559289 TBC1D9BQ66K14 1250 aa7.58□□□□□ -1.2
SHC4-206ENST00000559289 KSR2Q6VAB6 950 aa7.58□□□□□ -1.2
SHC4-206ENST00000559289 ARHGAP45Q92619 1136 aa7.58□□□□□ -1.2
SHC4-206ENST00000559289 ATP10DQ9P241 1426 aa7.58□□□□□ -1.2
SHC4-206ENST00000559289 ABCC4O15439 1325 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 PTPRCP08575 1304 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 UBN2Q6ZU65 1347 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 KIF16BQ96L93 1317 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 PXDNLA1KZ92 1463 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 PLIN1O60240 522 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 ZPR1O75312 459 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 IGKV5-2P06315 115 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 RLBP1P12271 317 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 TM4SF1P30408 202 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 EVX2Q03828 476 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 MSL1Q68DK7 614 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 CLEC4GQ6UXB4 293 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 ATF7IPQ6VMQ6 1270 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 KIF6Q6ZMV9 814 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 RIC3Q7Z5B4 369 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 ZNF34Q8IZ26 560 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 DNAAF4Q8WXU2 420 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 SGIP1Q9BQI5 828 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 ISCA1Q9BUE6 129 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 METTL22Q9BUU2 404 aaPredicted RBP7.57□□□□□ -1.2
SHC4-206ENST00000559289 MAP3K2Q9Y2U5 619 aa7.57□□□□□ -1.2
SHC4-206ENST00000559289 ANKRD31Q8N7Z5 1873 aa7.56□□□□□ -1.2
SHC4-206ENST00000559289 DDX60Q8IY21 1712 aaKnown RBP7.56□□□□□ -1.2
SHC4-206ENST00000559289 ZBTB7AO95365 584 aa7.56□□□□□ -1.2
SHC4-206ENST00000559289 DDR1Q08345 913 aa7.56□□□□□ -1.2
SHC4-206ENST00000559289 TCIRG1Q13488 830 aa7.56□□□□□ -1.2
SHC4-206ENST00000559289 POLA2Q14181 598 aa7.56□□□□□ -1.2
SHC4-206ENST00000559289 NFIXQ14938 502 aa7.56□□□□□ -1.2
SHC4-206ENST00000559289 CWF19L2Q2TBE0 894 aaKnown RBP7.56□□□□□ -1.2
SHC4-206ENST00000559289 BEND3Q5T5X7 828 aa7.56□□□□□ -1.2
SHC4-206ENST00000559289 C20orf194Q5TEA3 1177 aa7.56□□□□□ -1.2
SHC4-206ENST00000559289 ZKSCAN2Q63HK3 967 aa7.56□□□□□ -1.2
SHC4-206ENST00000559289 NPM2Q86SE8 214 aaKnown RBP7.56□□□□□ -1.2
SHC4-206ENST00000559289 REM2Q8IYK8 340 aaPredicted RBP7.56□□□□□ -1.2
SHC4-206ENST00000559289 SLC16A10Q8TF71 515 aa7.56□□□□□ -1.2
SHC4-206ENST00000559289 FRAT1Q92837 279 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms