RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 CNKSR1Q969H4 720 aa21.83■■□□□ 1.09
CDC42BPB-205ENST00000559245 TAOK3Q9H2K8 898 aa21.83■■□□□ 1.09
CDC42BPB-205ENST00000559245 DZIP3Q86Y13 1208 aaKnown RBP21.82■■□□□ 1.08
CDC42BPB-205ENST00000559245 PHACTR3Q96KR7 559 aa21.82■■□□□ 1.08
CDC42BPB-205ENST00000559245 SCN4AP35499 1836 aa21.81■■□□□ 1.08
CDC42BPB-205ENST00000559245 HSPA1AP0DMV8 641 aaKnown RBP21.81■■□□□ 1.08
CDC42BPB-205ENST00000559245 HSPA1BP0DMV9 641 aaKnown RBP21.81■■□□□ 1.08
CDC42BPB-205ENST00000559245 SRGNP10124 158 aa21.81■■□□□ 1.08
CDC42BPB-205ENST00000559245 PRPF40BQ6NWY9 871 aaKnown RBP21.81■■□□□ 1.08
CDC42BPB-205ENST00000559245 CAPN15O75808 1086 aa21.8■■□□□ 1.08
CDC42BPB-205ENST00000559245 PRKAR2BP31323 418 aa21.8■■□□□ 1.08
CDC42BPB-205ENST00000559245 PIP4K2AP48426 406 aaPredicted RBP21.8■■□□□ 1.08
CDC42BPB-205ENST00000559245 MASTLQ96GX5 879 aa21.8■■□□□ 1.08
CDC42BPB-205ENST00000559245 USP16Q9Y5T5 823 aa21.8■■□□□ 1.08
CDC42BPB-205ENST00000559245 DDNO94850 711 aaPredicted RBP21.79■■□□□ 1.08
CDC42BPB-205ENST00000559245 SOGA3Q5TF21 947 aa21.79■■□□□ 1.08
CDC42BPB-205ENST00000559245 RSPH6AQ9H0K4 717 aa21.79■■□□□ 1.08
CDC42BPB-205ENST00000559245 CHADLQ6NUI6 762 aa21.78■■□□□ 1.08
CDC42BPB-205ENST00000559245 PRAMEF22A3QJZ6 481 aa21.77■■□□□ 1.08
CDC42BPB-205ENST00000559245 CLEC4GQ6UXB4 293 aa21.77■■□□□ 1.08
CDC42BPB-205ENST00000559245 NBPF5PQ86XG9 351 aaPredicted RBP21.77■■□□□ 1.08
CDC42BPB-205ENST00000559245 CFAP53Q96M91 514 aa21.77■■□□□ 1.08
CDC42BPB-205ENST00000559245 POTEIP0CG38 1075 aa21.76■■□□□ 1.07
CDC42BPB-205ENST00000559245 POTEJP0CG39 1038 aa21.76■■□□□ 1.07
CDC42BPB-205ENST00000559245 CREBZFQ9NS37 354 aa21.75■■□□□ 1.07
CDC42BPB-205ENST00000559245 ZNF652Q9Y2D9 606 aa21.75■■□□□ 1.07
CDC42BPB-205ENST00000559245 SNRPA1P09661 255 aaKnown RBP21.74■■□□□ 1.07
CDC42BPB-205ENST00000559245 C7orf43Q8WVR3 580 aa21.74■■□□□ 1.07
CDC42BPB-205ENST00000559245 NUDCQ9Y266 331 aa21.74■■□□□ 1.07
CDC42BPB-205ENST00000559245 LAMB4A4D0S4 1761 aa21.74■■□□□ 1.07
CDC42BPB-205ENST00000559245 DLG5Q8TDM6 1919 aa21.73■■□□□ 1.07
CDC42BPB-205ENST00000559245 NPR1P16066 1061 aa21.73■■□□□ 1.07
CDC42BPB-205ENST00000559245 CCDC93Q567U6 631 aa21.73■■□□□ 1.07
CDC42BPB-205ENST00000559245 MCM10Q7L590 875 aa21.73■■□□□ 1.07
CDC42BPB-205ENST00000559245 RTF1Q92541 710 aaKnown RBP21.73■■□□□ 1.07
CDC42BPB-205ENST00000559245 MKRN1Q9UHC7 482 aaKnown RBP21.73■■□□□ 1.07
CDC42BPB-205ENST00000559245 NUP98P52948 1817 aa21.72■■□□□ 1.07
CDC42BPB-205ENST00000559245 IQCA1LA6NCM1 817 aa21.72■■□□□ 1.07
CDC42BPB-205ENST00000559245 KLRG2A4D1S0 409 aaPredicted RBP21.71■■□□□ 1.07
CDC42BPB-205ENST00000559245 NBPF26B4DH59 902 aa21.71■■□□□ 1.07
CDC42BPB-205ENST00000559245 U2AF1L5P0DN76 240 aaPredicted RBP21.71■■□□□ 1.07
CDC42BPB-205ENST00000559245 U2AF1Q01081 240 aaKnown RBP eCLIP21.71■■□□□ 1.07
CDC42BPB-205ENST00000559245 NBPF10Q6P3W6 841 aaKnown RBP21.71■■□□□ 1.07
CDC42BPB-205ENST00000559245 NBPF15Q8N660 670 aa21.71■■□□□ 1.07
CDC42BPB-205ENST00000559245 L3MBTL3Q96JM7 780 aaPredicted RBP21.71■■□□□ 1.07
CDC42BPB-205ENST00000559245 NIP7Q9Y221 180 aaKnown RBP eCLIP21.71■■□□□ 1.07
CDC42BPB-205ENST00000559245 TPTE2Q6XPS3 522 aa21.7■■□□□ 1.06
CDC42BPB-205ENST00000559245 LDHDQ86WU2 507 aa21.7■■□□□ 1.06
CDC42BPB-205ENST00000559245 FKBP4Q02790 459 aaKnown RBP eCLIP21.69■■□□□ 1.06
CDC42BPB-205ENST00000559245 DCTN1Q14203 1278 aa21.69■■□□□ 1.06
CDC42BPB-205ENST00000559245 TAF1DQ9H5J8 278 aaPredicted RBP21.69■■□□□ 1.06
CDC42BPB-205ENST00000559245 FAM177BA6PVY3 158 aa21.68■■□□□ 1.06
CDC42BPB-205ENST00000559245 RGL2O15211 777 aa21.68■■□□□ 1.06
CDC42BPB-205ENST00000559245 ZNF277Q9NRM2 450 aaPredicted RBP21.68■■□□□ 1.06
CDC42BPB-205ENST00000559245 PASKQ96RG2 1323 aa21.68■■□□□ 1.06
CDC42BPB-205ENST00000559245 KDM3BQ7LBC6 1761 aa21.67■■□□□ 1.06
CDC42BPB-205ENST00000559245 ADAMTSL1Q8N6G6 1762 aa21.67■■□□□ 1.06
CDC42BPB-205ENST00000559245 ZNF541Q9H0D2 1346 aa21.67■■□□□ 1.06
CDC42BPB-205ENST00000559245 OLFM4Q6UX06 510 aa21.67■■□□□ 1.06
CDC42BPB-205ENST00000559245 CNTNAP1P78357 1384 aa21.66■■□□□ 1.06
CDC42BPB-205ENST00000559245 HTATSF1O43719 755 aaKnown RBP21.66■■□□□ 1.06
CDC42BPB-205ENST00000559245 PPP2R1AP30153 589 aa21.66■■□□□ 1.06
CDC42BPB-205ENST00000559245 HLFQ16534 295 aa21.66■■□□□ 1.06
CDC42BPB-205ENST00000559245 RTKN2Q8IZC4 609 aa21.66■■□□□ 1.06
CDC42BPB-205ENST00000559245 ALDH1B1P30837 517 aa21.65■■□□□ 1.06
CDC42BPB-205ENST00000559245 TAF7Q15545 349 aaPredicted RBP21.65■■□□□ 1.06
CDC42BPB-205ENST00000559245 EAPPQ56P03 285 aaPredicted RBP21.65■■□□□ 1.06
CDC42BPB-205ENST00000559245 GTF2E1P29083 439 aaPredicted RBP21.64■■□□□ 1.05
CDC42BPB-205ENST00000559245 HACL1Q9UJ83 578 aa21.64■■□□□ 1.05
CDC42BPB-205ENST00000559245 ITGBL1O95965 494 aaPredicted RBP21.63■■□□□ 1.05
CDC42BPB-205ENST00000559245 IARSP41252 1262 aaKnown RBP21.63■■□□□ 1.05
CDC42BPB-205ENST00000559245 SYNE4Q8N205 404 aa21.63■■□□□ 1.05
CDC42BPB-205ENST00000559245 MIS18AQ9NYP9 233 aa21.63■■□□□ 1.05
CDC42BPB-205ENST00000559245 CLEC11AQ9Y240 323 aa21.63■■□□□ 1.05
CDC42BPB-205ENST00000559245 TMEM88BA6NKF7 163 aa21.62■■□□□ 1.05
CDC42BPB-205ENST00000559245 EPHX2P34913 555 aa21.62■■□□□ 1.05
CDC42BPB-205ENST00000559245 FZD9O00144 591 aa21.61■■□□□ 1.05
CDC42BPB-205ENST00000559245 FOXN1O15353 648 aa21.61■■□□□ 1.05
CDC42BPB-205ENST00000559245 RNF123Q5XPI4 1314 aa21.6■■□□□ 1.05
CDC42BPB-205ENST00000559245 NGEFQ8N5V2 710 aa21.6■■□□□ 1.05
CDC42BPB-205ENST00000559245 SNED1Q8TER0 1413 aa21.6■■□□□ 1.05
CDC42BPB-205ENST00000559245 ABCC12Q96J65 1359 aa21.6■■□□□ 1.05
CDC42BPB-205ENST00000559245 VEGFBP49765 207 aa21.59■■□□□ 1.05
CDC42BPB-205ENST00000559245 NUTM1Q86Y26 1132 aa21.59■■□□□ 1.05
CDC42BPB-205ENST00000559245 NYXQ9GZU5 481 aa21.59■■□□□ 1.05
CDC42BPB-205ENST00000559245 ERVV-1B6SEH8 477 aa21.58■■□□□ 1.05
CDC42BPB-205ENST00000559245 CRY2Q49AN0 593 aa21.58■■□□□ 1.05
CDC42BPB-205ENST00000559245 PNMA8AQ86V59 439 aaPredicted RBP21.58■■□□□ 1.05
CDC42BPB-205ENST00000559245 GPC2Q8N158 579 aa21.58■■□□□ 1.05
CDC42BPB-205ENST00000559245 PSMD1Q99460 953 aa21.58■■□□□ 1.05
CDC42BPB-205ENST00000559245 JDP2Q8WYK2 163 aa21.57■■□□□ 1.04
CDC42BPB-205ENST00000559245 LTBP1Q14766 1721 aa21.57■■□□□ 1.04
CDC42BPB-205ENST00000559245 COL4A5P29400 1685 aa21.56■■□□□ 1.04
CDC42BPB-205ENST00000559245 MAP3K15Q6ZN16 1313 aa21.56■■□□□ 1.04
CDC42BPB-205ENST00000559245 TRPM7Q96QT4 1865 aa21.56■■□□□ 1.04
CDC42BPB-205ENST00000559245 MAP1SQ66K74 1059 aaPredicted RBP21.56■■□□□ 1.04
CDC42BPB-205ENST00000559245 CNTROBQ8N137 903 aa21.56■■□□□ 1.04
CDC42BPB-205ENST00000559245 PNISRQ8TF01 805 aaKnown RBP21.56■■□□□ 1.04
CDC42BPB-205ENST00000559245 AIDAQ96BJ3 306 aa21.56■■□□□ 1.04
CDC42BPB-205ENST00000559245 PRDM10Q9NQV6 1147 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms