RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 USP54Q70EL1 1684 aa8.65□□□□□ -1.02
MARK3-216ENST00000558953 PARD3Q8TEW0 1356 aa8.65□□□□□ -1.02
MARK3-216ENST00000558953 WDR17Q8IZU2 1322 aa8.65□□□□□ -1.02
MARK3-216ENST00000558953 APBA3O96018 575 aa8.65□□□□□ -1.02
MARK3-216ENST00000558953 CFHP08603 1231 aa8.65□□□□□ -1.02
MARK3-216ENST00000558953 HDGFL2Q7Z4V5 671 aaPredicted RBP8.65□□□□□ -1.02
MARK3-216ENST00000558953 TRIM47Q96LD4 638 aa8.65□□□□□ -1.02
MARK3-216ENST00000558953 SENP2Q9HC62 589 aa8.65□□□□□ -1.02
MARK3-216ENST00000558953 TERF2IPQ9NYB0 399 aa8.65□□□□□ -1.02
MARK3-216ENST00000558953 WNK3Q9BYP7 1800 aa8.65□□□□□ -1.02
MARK3-216ENST00000558953 LRP5O75197 1615 aa8.65□□□□□ -1.03
MARK3-216ENST00000558953 NFAT5O94916 1531 aa8.64□□□□□ -1.03
MARK3-216ENST00000558953 USP31Q70CQ4 1352 aa8.64□□□□□ -1.03
MARK3-216ENST00000558953 CSB-PGBD3P0DP91 1061 aa8.64□□□□□ -1.03
MARK3-216ENST00000558953 DNAJB2P25686 324 aa8.64□□□□□ -1.03
MARK3-216ENST00000558953 EZH2Q15910 746 aaKnown RBP8.64□□□□□ -1.03
MARK3-216ENST00000558953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.64□□□□□ -1.03
MARK3-216ENST00000558953 CAMKK2Q96RR4 588 aa8.64□□□□□ -1.03
MARK3-216ENST00000558953 CDCA7Q9BWT1 371 aaPredicted RBP8.64□□□□□ -1.03
MARK3-216ENST00000558953 SLC12A5Q9H2X9 1139 aa8.64□□□□□ -1.03
MARK3-216ENST00000558953 LRRC37A3O60309 1634 aa8.64□□□□□ -1.03
MARK3-216ENST00000558953 ABCC6O95255 1503 aa8.64□□□□□ -1.03
MARK3-216ENST00000558953 CD163L1Q9NR16 1453 aa8.64□□□□□ -1.03
MARK3-216ENST00000558953 SBF2Q86WG5 1849 aa8.64□□□□□ -1.03
MARK3-216ENST00000558953 OVOS2A0A0G2JMS6 1433 aa8.63□□□□□ -1.03
MARK3-216ENST00000558953 OVOS2A0A0J9YW53 1432 aa8.63□□□□□ -1.03
MARK3-216ENST00000558953 OVOS2Q6IE36 1432 aa8.63□□□□□ -1.03
MARK3-216ENST00000558953 PEAK1Q9H792 1746 aa8.63□□□□□ -1.03
MARK3-216ENST00000558953 RREB1Q92766 1687 aa8.63□□□□□ -1.03
MARK3-216ENST00000558953 TTC24A2A3L6 582 aaPredicted RBP8.63□□□□□ -1.03
MARK3-216ENST00000558953 DDB1Q16531 1140 aa8.63□□□□□ -1.03
MARK3-216ENST00000558953 CARD10Q9BWT7 1032 aa8.63□□□□□ -1.03
MARK3-216ENST00000558953 LTN1O94822 1766 aa8.63□□□□□ -1.03
MARK3-216ENST00000558953 EDC4Q6P2E9 1401 aaKnown RBP8.63□□□□□ -1.03
MARK3-216ENST00000558953 NINLQ9Y2I6 1382 aa8.62□□□□□ -1.03
MARK3-216ENST00000558953 ST20-MTHFSA0A0A6YYL1 179 aa8.62□□□□□ -1.03
MARK3-216ENST00000558953 R3HDM1Q15032 1099 aaKnown RBP8.62□□□□□ -1.03
MARK3-216ENST00000558953 NME9Q86XW9 330 aa8.62□□□□□ -1.03
MARK3-216ENST00000558953 ZSCAN1Q8NBB4 408 aa8.62□□□□□ -1.03
MARK3-216ENST00000558953 TMEM134Q9H6X4 195 aa8.62□□□□□ -1.03
MARK3-216ENST00000558953 CCDC7Q96M83 1385 aa8.61□□□□□ -1.03
MARK3-216ENST00000558953 RGPD3A6NKT7 1758 aaPredicted RBP8.61□□□□□ -1.03
MARK3-216ENST00000558953 RGPD4Q7Z3J3 1758 aa8.61□□□□□ -1.03
MARK3-216ENST00000558953 NUP188Q5SRE5 1749 aa8.61□□□□□ -1.03
MARK3-216ENST00000558953 NBPF14Q5TI25 921 aa8.61□□□□□ -1.03
MARK3-216ENST00000558953 SCUBE3Q8IX30 993 aa8.61□□□□□ -1.03
MARK3-216ENST00000558953 SLC16A10Q8TF71 515 aa8.61□□□□□ -1.03
MARK3-216ENST00000558953 TESK2Q96S53 571 aa8.61□□□□□ -1.03
MARK3-216ENST00000558953 ARIH1Q9Y4X5 557 aaPredicted RBP8.61□□□□□ -1.03
MARK3-216ENST00000558953 A0A1W2PP64 1363 aa8.61□□□□□ -1.03
MARK3-216ENST00000558953 EXOC5O00471 708 aa8.6□□□□□ -1.03
MARK3-216ENST00000558953 SPSB2Q99619 263 aa8.6□□□□□ -1.03
MARK3-216ENST00000558953 LORP23490 312 aaPredicted RBP8.59□□□□□ -1.03
MARK3-216ENST00000558953 MARCH10Q8NA82 808 aaPredicted RBP8.59□□□□□ -1.03
MARK3-216ENST00000558953 NLRP2Q9NX02 1062 aa8.59□□□□□ -1.03
MARK3-216ENST00000558953 BCL9O00512 1426 aa8.59□□□□□ -1.03
MARK3-216ENST00000558953 KAT6BQ8WYB5 2073 aa8.58□□□□□ -1.04
MARK3-216ENST00000558953 PLSCR1O15162 318 aa8.58□□□□□ -1.04
MARK3-216ENST00000558953 TMF1P82094 1093 aa8.58□□□□□ -1.04
MARK3-216ENST00000558953 E2F4Q16254 413 aa8.58□□□□□ -1.04
MARK3-216ENST00000558953 KIFC2Q96AC6 838 aa8.58□□□□□ -1.04
MARK3-216ENST00000558953 FAM208AQ9UK61 1670 aaKnown RBP8.58□□□□□ -1.04
MARK3-216ENST00000558953 USP47Q96K76 1375 aa8.58□□□□□ -1.04
MARK3-216ENST00000558953 TNS2Q63HR2 1409 aa8.57□□□□□ -1.04
MARK3-216ENST00000558953 SRCAPQ6ZRS2 3230 aa8.57□□□□□ -1.04
MARK3-216ENST00000558953 IL2RBP14784 551 aa8.57□□□□□ -1.04
MARK3-216ENST00000558953 SMPD1P17405 629 aa8.57□□□□□ -1.04
MARK3-216ENST00000558953 GMPRP36959 345 aa8.57□□□□□ -1.04
MARK3-216ENST00000558953 CDCA8Q53HL2 280 aa8.57□□□□□ -1.04
MARK3-216ENST00000558953 RBM46Q8TBY0 533 aaKnown RBP8.57□□□□□ -1.04
MARK3-216ENST00000558953 ANKRD24Q8TF21 1146 aa8.57□□□□□ -1.04
MARK3-216ENST00000558953 IP6K1Q92551 441 aa8.57□□□□□ -1.04
MARK3-216ENST00000558953 COG3Q96JB2 828 aa8.57□□□□□ -1.04
MARK3-216ENST00000558953 TIMELESSQ9UNS1 1208 aa8.57□□□□□ -1.04
MARK3-216ENST00000558953 FCF1Q9Y324 198 aaKnown RBP8.57□□□□□ -1.04
MARK3-216ENST00000558953 ANKRD36BQ8N2N9 1353 aa8.57□□□□□ -1.04
MARK3-216ENST00000558953 SLC10A3P09131 477 aa8.56□□□□□ -1.04
MARK3-216ENST00000558953 PTF1AQ7RTS3 328 aa8.56□□□□□ -1.04
MARK3-216ENST00000558953 NHSQ6T4R5 1651 aa8.56□□□□□ -1.04
MARK3-216ENST00000558953 CLSPNQ9HAW4 1339 aa8.55□□□□□ -1.04
MARK3-216ENST00000558953 SNIP1Q8TAD8 396 aaKnown RBP8.55□□□□□ -1.04
MARK3-216ENST00000558953 MAP3K19Q56UN5 1328 aa8.54□□□□□ -1.04
MARK3-216ENST00000558953 AMPHP49418 695 aa8.54□□□□□ -1.04
MARK3-216ENST00000558953 KCNV2Q8TDN2 545 aa8.54□□□□□ -1.04
MARK3-216ENST00000558953 LTV1Q96GA3 475 aaPredicted RBP8.54□□□□□ -1.04
MARK3-216ENST00000558953 KIF20BQ96Q89 1820 aa8.54□□□□□ -1.04
MARK3-216ENST00000558953 RGPD2P0DJD1 1756 aa8.53□□□□□ -1.04
MARK3-216ENST00000558953 BTAF1O14981 1849 aa8.53□□□□□ -1.04
MARK3-216ENST00000558953 RCCD1A6NED2 376 aa8.53□□□□□ -1.04
MARK3-216ENST00000558953 FYB1O15117 783 aa8.53□□□□□ -1.04
MARK3-216ENST00000558953 HOXC9P31274 260 aa8.53□□□□□ -1.04
MARK3-216ENST00000558953 TXNRD1Q16881 649 aa8.53□□□□□ -1.04
MARK3-216ENST00000558953 PUS10Q3MIT2 529 aaKnown RBP8.53□□□□□ -1.04
MARK3-216ENST00000558953 IRF7Q92985 503 aa8.53□□□□□ -1.04
MARK3-216ENST00000558953 PCGF6Q9BYE7 350 aa8.53□□□□□ -1.04
MARK3-216ENST00000558953 SPON1Q9HCB6 807 aa8.53□□□□□ -1.04
MARK3-216ENST00000558953 NXF1Q9UBU9 619 aaKnown RBP8.53□□□□□ -1.04
MARK3-216ENST00000558953 RTL1A6NKG5 1358 aa8.52□□□□□ -1.05
MARK3-216ENST00000558953 WNT7AO00755 349 aa8.52□□□□□ -1.05
MARK3-216ENST00000558953 KCNQ2O43526 872 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms