RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 PSME1Q06323 249 aa5.96□□□□□ -1.46
LRRC28-212ENST00000558911 PRSS36Q5K4E3 855 aa5.96□□□□□ -1.46
LRRC28-212ENST00000558911 NKAPLQ5M9Q1 402 aa5.96□□□□□ -1.46
LRRC28-212ENST00000558911 TBCELQ5QJ74 424 aa5.96□□□□□ -1.46
LRRC28-212ENST00000558911 ZFP64Q9NPA5 681 aa5.96□□□□□ -1.46
LRRC28-212ENST00000558911 TBC1D8BQ0IIM8 1120 aa5.95□□□□□ -1.46
LRRC28-212ENST00000558911 SFSWAPQ12872 951 aaKnown RBP5.95□□□□□ -1.46
LRRC28-212ENST00000558911 SEMA3FQ13275 785 aa5.95□□□□□ -1.46
LRRC28-212ENST00000558911 ZNF232Q9UNY5 417 aa5.95□□□□□ -1.46
LRRC28-212ENST00000558911 IQSEC3Q9UPP2 1182 aaPredicted RBP5.95□□□□□ -1.46
LRRC28-212ENST00000558911 ALBP02768 609 aa5.94□□□□□ -1.46
LRRC28-212ENST00000558911 MAP7D1Q3KQU3 841 aa5.94□□□□□ -1.46
LRRC28-212ENST00000558911 TRAPPC3LQ5T215 181 aa5.94□□□□□ -1.46
LRRC28-212ENST00000558911 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.94□□□□□ -1.46
LRRC28-212ENST00000558911 L3MBTL2Q969R5 705 aa5.94□□□□□ -1.46
LRRC28-212ENST00000558911 SLC30A3Q99726 388 aa5.94□□□□□ -1.46
LRRC28-212ENST00000558911 IGFLR1Q9H665 355 aa5.94□□□□□ -1.46
LRRC28-212ENST00000558911 GDPD2Q9HCC8 539 aa5.94□□□□□ -1.46
LRRC28-212ENST00000558911 EFSO43281 561 aa5.93□□□□□ -1.46
LRRC28-212ENST00000558911 MTFR1Q15390 333 aa5.93□□□□□ -1.46
LRRC28-212ENST00000558911 ARTNQ5T4W7 220 aa5.93□□□□□ -1.46
LRRC28-212ENST00000558911 KRTAP1-3Q8IUG1 177 aa5.93□□□□□ -1.46
LRRC28-212ENST00000558911 ZDHHC1Q8WTX9 485 aa5.93□□□□□ -1.46
LRRC28-212ENST00000558911 SLC4A9Q96Q91 983 aa5.93□□□□□ -1.46
LRRC28-212ENST00000558911 NACC1Q96RE7 527 aa5.93□□□□□ -1.46
LRRC28-212ENST00000558911 CHIC2Q9UKJ5 165 aa5.93□□□□□ -1.46
LRRC28-212ENST00000558911 PIK3CDO00329 1044 aa5.92□□□□□ -1.46
LRRC28-212ENST00000558911 BACH1O14867 736 aa5.92□□□□□ -1.46
LRRC28-212ENST00000558911 BRPF1P55201 1214 aaPredicted RBP5.92□□□□□ -1.46
LRRC28-212ENST00000558911 LAMC2Q13753 1193 aa5.92□□□□□ -1.46
LRRC28-212ENST00000558911 SAMD5Q5TGI4 173 aa5.92□□□□□ -1.46
LRRC28-212ENST00000558911 ZNF295-AS1Q8N0V1 137 aa5.92□□□□□ -1.46
LRRC28-212ENST00000558911 MICALL1Q8N3F8 863 aa5.92□□□□□ -1.46
LRRC28-212ENST00000558911 STARD13Q9Y3M8 1113 aa5.92□□□□□ -1.46
LRRC28-212ENST00000558911 SIN3BO75182 1162 aa5.91□□□□□ -1.46
LRRC28-212ENST00000558911 SKIP12755 728 aa5.91□□□□□ -1.46
LRRC28-212ENST00000558911 NOS2P35228 1153 aa5.91□□□□□ -1.46
LRRC28-212ENST00000558911 ADH7P40394 386 aa5.91□□□□□ -1.46
LRRC28-212ENST00000558911 SPEM2Q0P670 501 aa5.91□□□□□ -1.46
LRRC28-212ENST00000558911 RHPN1Q8TCX5 695 aa5.91□□□□□ -1.46
LRRC28-212ENST00000558911 CEP63Q96MT8 703 aa5.91□□□□□ -1.46
LRRC28-212ENST00000558911 ZNF358Q9NW07 568 aa5.91□□□□□ -1.46
LRRC28-212ENST00000558911 PCDHGA11Q9Y5H2 935 aa5.91□□□□□ -1.46
LRRC28-212ENST00000558911 GTF2IP78347 998 aa5.9□□□□□ -1.46
LRRC28-212ENST00000558911 NEUROD1Q13562 356 aa5.9□□□□□ -1.46
LRRC28-212ENST00000558911 COL9A3Q14050 684 aaPredicted RBP5.9□□□□□ -1.46
LRRC28-212ENST00000558911 EML3Q32P44 896 aa5.9□□□□□ -1.46
LRRC28-212ENST00000558911 SH3PXD2AQ5TCZ1 1133 aa5.9□□□□□ -1.46
LRRC28-212ENST00000558911 SLC9A9Q8IVB4 645 aa5.9□□□□□ -1.46
LRRC28-212ENST00000558911 TNS4Q8IZW8 715 aa5.9□□□□□ -1.46
LRRC28-212ENST00000558911 SCHIP1Q9P0W5 487 aaPredicted RBP5.9□□□□□ -1.46
LRRC28-212ENST00000558911 NOD1Q9Y239 953 aa5.9□□□□□ -1.46
LRRC28-212ENST00000558911 SFI1A8K8P3 1242 aa5.89□□□□□ -1.47
LRRC28-212ENST00000558911 ADARB2-AS1A8MUL3 147 aa5.89□□□□□ -1.47
LRRC28-212ENST00000558911 NID1P14543 1247 aa5.89□□□□□ -1.47
LRRC28-212ENST00000558911 SHISA2Q6UWI4 295 aa5.89□□□□□ -1.47
LRRC28-212ENST00000558911 NUDT8Q8WV74 236 aa5.89□□□□□ -1.47
LRRC28-212ENST00000558911 TNFRSF25Q93038 417 aa5.89□□□□□ -1.47
LRRC28-212ENST00000558911 BHMTQ93088 406 aa5.89□□□□□ -1.47
LRRC28-212ENST00000558911 HSH2DQ96JZ2 352 aa5.89□□□□□ -1.47
LRRC28-212ENST00000558911 HCN4Q9Y3Q4 1203 aa5.89□□□□□ -1.47
LRRC28-212ENST00000558911 SERTM1A2A2V5 107 aa5.88□□□□□ -1.47
LRRC28-212ENST00000558911 C9orf172C9J069 976 aa5.88□□□□□ -1.47
LRRC28-212ENST00000558911 LILRB5O75023 590 aa5.88□□□□□ -1.47
LRRC28-212ENST00000558911 UBTFP17480 764 aaKnown RBP5.88□□□□□ -1.47
LRRC28-212ENST00000558911 TEAD4Q15561 434 aa5.88□□□□□ -1.47
LRRC28-212ENST00000558911 WASHC4Q2M389 1173 aa5.88□□□□□ -1.47
LRRC28-212ENST00000558911 DEPDC4Q8N2C3 294 aa5.88□□□□□ -1.47
LRRC28-212ENST00000558911 TP53INP1Q96A56 240 aa5.88□□□□□ -1.47
LRRC28-212ENST00000558911 MDFIQ99750 246 aa5.88□□□□□ -1.47
LRRC28-212ENST00000558911 UBE2OQ9C0C9 1292 aaKnown RBP5.88□□□□□ -1.47
LRRC28-212ENST00000558911 BRD7Q9NPI1 651 aa5.88□□□□□ -1.47
LRRC28-212ENST00000558911 USP21Q9UK80 565 aa5.88□□□□□ -1.47
LRRC28-212ENST00000558911 EML1O00423 815 aa5.87□□□□□ -1.47
LRRC28-212ENST00000558911 TRIM26Q12899 539 aaPredicted RBP5.87□□□□□ -1.47
LRRC28-212ENST00000558911 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
LRRC28-212ENST00000558911 JPH1Q9HDC5 661 aaPredicted RBP5.87□□□□□ -1.47
LRRC28-212ENST00000558911 SPATA31D1Q6ZQQ2 1576 aa5.86□□□□□ -1.47
LRRC28-212ENST00000558911 A0A0A0MRY4 1105 aa5.86□□□□□ -1.47
LRRC28-212ENST00000558911 SELPP16109 830 aa5.86□□□□□ -1.47
LRRC28-212ENST00000558911 NCOA4Q13772 614 aa5.86□□□□□ -1.47
LRRC28-212ENST00000558911 MBTPS1Q14703 1052 aa5.86□□□□□ -1.47
LRRC28-212ENST00000558911 NPM2Q86SE8 214 aaKnown RBP5.86□□□□□ -1.47
LRRC28-212ENST00000558911 KCNH4Q9UQ05 1017 aa5.86□□□□□ -1.47
LRRC28-212ENST00000558911 HYAL3O43820 417 aaPredicted RBP5.85□□□□□ -1.47
LRRC28-212ENST00000558911 RAC1P63000 192 aa5.85□□□□□ -1.47
LRRC28-212ENST00000558911 LRP8Q14114 963 aa5.85□□□□□ -1.47
LRRC28-212ENST00000558911 ADGRE1Q14246 886 aa5.85□□□□□ -1.47
LRRC28-212ENST00000558911 C20orf204Q6ZNR8 217 aa5.85□□□□□ -1.47
LRRC28-212ENST00000558911 TXNRD3Q86VQ6 643 aa5.85□□□□□ -1.47
LRRC28-212ENST00000558911 DMRTC2Q8IXT2 367 aaPredicted RBP5.85□□□□□ -1.47
LRRC28-212ENST00000558911 PRDM6Q9NQX0 595 aa5.85□□□□□ -1.47
LRRC28-212ENST00000558911 CHMP3Q9Y3E7 222 aa5.85□□□□□ -1.47
LRRC28-212ENST00000558911 ELNP15502 786 aa5.84□□□□□ -1.47
LRRC28-212ENST00000558911 SOX11P35716 441 aa5.84□□□□□ -1.47
LRRC28-212ENST00000558911 ZNF280CQ8ND82 737 aa5.84□□□□□ -1.47
LRRC28-212ENST00000558911 TPCN2Q8NHX9 752 aa5.84□□□□□ -1.47
LRRC28-212ENST00000558911 PHACTR1Q9C0D0 580 aa5.84□□□□□ -1.47
LRRC28-212ENST00000558911 H2AFB1P0C5Y9 115 aa5.83□□□□□ -1.48
LRRC28-212ENST00000558911 H2AFB2P0C5Z0 115 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms