RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 TRIM66O15016 1216 aa13.61□□□□□ -0.23
SPG11-212ENST00000558790 DMRTA1Q5VZB9 504 aa13.61□□□□□ -0.23
SPG11-212ENST00000558790 ZNF687Q8N1G0 1237 aa13.61□□□□□ -0.23
SPG11-212ENST00000558790 PUS7Q96PZ0 661 aaKnown RBP13.61□□□□□ -0.23
SPG11-212ENST00000558790 TESK2Q96S53 571 aa13.61□□□□□ -0.23
SPG11-212ENST00000558790 ARHGAP33O14559 1287 aa13.6□□□□□ -0.23
SPG11-212ENST00000558790 C4BP0C0L5 1744 aa13.6□□□□□ -0.23
SPG11-212ENST00000558790 FBLN1P23142 703 aa13.6□□□□□ -0.23
SPG11-212ENST00000558790 SLC16A10Q8TF71 515 aa13.6□□□□□ -0.23
SPG11-212ENST00000558790 COG3Q96JB2 828 aa13.6□□□□□ -0.23
SPG11-212ENST00000558790 TSKSQ9UJT2 592 aa13.6□□□□□ -0.23
SPG11-212ENST00000558790 WWC3Q9ULE0 1092 aa13.6□□□□□ -0.23
SPG11-212ENST00000558790 JMYQ8N9B5 988 aa13.59□□□□□ -0.23
SPG11-212ENST00000558790 KLRG1Q96E93 195 aa13.59□□□□□ -0.23
SPG11-212ENST00000558790 TFCP2L1Q9NZI6 479 aa13.59□□□□□ -0.23
SPG11-212ENST00000558790 MAP2P11137 1827 aaKnown RBP13.58□□□□□ -0.24
SPG11-212ENST00000558790 AMPHP49418 695 aa13.58□□□□□ -0.24
SPG11-212ENST00000558790 TTC13Q8NBP0 860 aa13.58□□□□□ -0.24
SPG11-212ENST00000558790 RBM27Q9P2N5 1060 aaKnown RBP13.58□□□□□ -0.24
SPG11-212ENST00000558790 SMG6Q86US8 1419 aaKnown RBP13.57□□□□□ -0.24
SPG11-212ENST00000558790 ST20-MTHFSA0A0A6YYL1 179 aa13.57□□□□□ -0.24
SPG11-212ENST00000558790 C3orf80F5H4A9 247 aa13.57□□□□□ -0.24
SPG11-212ENST00000558790 BRPF1P55201 1214 aaPredicted RBP13.57□□□□□ -0.24
SPG11-212ENST00000558790 ZCRB1Q8TBF4 217 aaKnown RBP13.57□□□□□ -0.24
SPG11-212ENST00000558790 CCNL1Q9UK58 526 aaPredicted RBP13.57□□□□□ -0.24
SPG11-212ENST00000558790 TRIM6-TRIM34B2RNG4 842 aa13.56□□□□□ -0.24
SPG11-212ENST00000558790 RRS1Q15050 365 aaKnown RBP13.56□□□□□ -0.24
SPG11-212ENST00000558790 NEUROD2Q15784 382 aa13.56□□□□□ -0.24
SPG11-212ENST00000558790 USHBP1Q8N6Y0 703 aa13.56□□□□□ -0.24
SPG11-212ENST00000558790 ZBED2Q9BTP6 218 aa13.56□□□□□ -0.24
SPG11-212ENST00000558790 ADGRG1Q9Y653 693 aa13.56□□□□□ -0.24
SPG11-212ENST00000558790 USP47Q96K76 1375 aa13.56□□□□□ -0.24
SPG11-212ENST00000558790 NBPF6Q5VWK0 638 aa13.55□□□□□ -0.24
SPG11-212ENST00000558790 MSL1Q68DK7 614 aa13.55□□□□□ -0.24
SPG11-212ENST00000558790 NBPF4Q96M43 638 aa13.55□□□□□ -0.24
SPG11-212ENST00000558790 PBX2P40425 430 aa13.54□□□□□ -0.24
SPG11-212ENST00000558790 PDE4DQ08499 809 aa13.54□□□□□ -0.24
SPG11-212ENST00000558790 NLRP7Q8WX94 980 aa13.54□□□□□ -0.24
SPG11-212ENST00000558790 PHOX2BQ99453 314 aa13.54□□□□□ -0.24
SPG11-212ENST00000558790 TOMM70O94826 608 aa13.53□□□□□ -0.24
SPG11-212ENST00000558790 COL23A1Q86Y22 540 aaPredicted RBP13.53□□□□□ -0.24
SPG11-212ENST00000558790 GGNBP2Q9H3C7 697 aa13.53□□□□□ -0.24
SPG11-212ENST00000558790 CGNL1Q0VF96 1302 aa13.53□□□□□ -0.24
SPG11-212ENST00000558790 FLT4P35916 1363 aa13.53□□□□□ -0.24
SPG11-212ENST00000558790 FYB1O15117 783 aa13.52□□□□□ -0.25
SPG11-212ENST00000558790 RAPGEF4Q8WZA2 1011 aa13.52□□□□□ -0.25
SPG11-212ENST00000558790 NMRK2Q9NPI5 230 aa13.52□□□□□ -0.25
SPG11-212ENST00000558790 PCDH11XQ9BZA7 1347 aa13.52□□□□□ -0.25
SPG11-212ENST00000558790 PCDH11YQ9BZA8 1340 aa13.52□□□□□ -0.25
SPG11-212ENST00000558790 INSRP06213 1382 aa13.52□□□□□ -0.25
SPG11-212ENST00000558790 PALLDQ8WX93 1383 aa13.52□□□□□ -0.25
SPG11-212ENST00000558790 KIF13BQ9NQT8 1826 aa13.51□□□□□ -0.25
SPG11-212ENST00000558790 NCAPD2Q15021 1401 aa13.51□□□□□ -0.25
SPG11-212ENST00000558790 METTL3Q86U44 580 aaKnown RBP13.51□□□□□ -0.25
SPG11-212ENST00000558790 KIAA1551Q9HCM1 1747 aa13.5□□□□□ -0.25
SPG11-212ENST00000558790 SMAPO00193 183 aa13.5□□□□□ -0.25
SPG11-212ENST00000558790 HSP90AB2PQ58FF8 381 aa13.5□□□□□ -0.25
SPG11-212ENST00000558790 NUDT18Q6ZVK8 323 aa13.5□□□□□ -0.25
SPG11-212ENST00000558790 PXYLP1Q8TE99 480 aa13.5□□□□□ -0.25
SPG11-212ENST00000558790 KIAA1468Q9P260 1216 aa13.5□□□□□ -0.25
SPG11-212ENST00000558790 PNMA3Q9UL41 463 aa13.5□□□□□ -0.25
SPG11-212ENST00000558790 CICQ96RK0 1608 aaPredicted RBP13.5□□□□□ -0.25
SPG11-212ENST00000558790 KIF24Q5T7B8 1368 aa13.49□□□□□ -0.25
SPG11-212ENST00000558790 TATP17735 454 aaPredicted RBP13.49□□□□□ -0.25
SPG11-212ENST00000558790 COL5A3P25940 1745 aaPredicted RBP13.49□□□□□ -0.25
SPG11-212ENST00000558790 NSD3Q9BZ95 1437 aa13.48□□□□□ -0.25
SPG11-212ENST00000558790 TNRC18O15417 2968 aaPredicted RBP13.48□□□□□ -0.25
SPG11-212ENST00000558790 N4BP2Q86UW6 1770 aaPredicted RBP13.48□□□□□ -0.25
SPG11-212ENST00000558790 OATP04181 439 aa13.48□□□□□ -0.25
SPG11-212ENST00000558790 TMF1P82094 1093 aa13.48□□□□□ -0.25
SPG11-212ENST00000558790 AMHR2Q16671 573 aa13.48□□□□□ -0.25
SPG11-212ENST00000558790 PACS2Q86VP3 889 aa13.48□□□□□ -0.25
SPG11-212ENST00000558790 TATDN2Q93075 761 aa13.48□□□□□ -0.25
SPG11-212ENST00000558790 BRCA1P38398 1863 aaKnown RBP13.48□□□□□ -0.25
SPG11-212ENST00000558790 C4AP0C0L4 1744 aa13.47□□□□□ -0.25
SPG11-212ENST00000558790 IGSF1Q8N6C5 1336 aa13.47□□□□□ -0.25
SPG11-212ENST00000558790 NBPF26B4DH59 902 aa13.47□□□□□ -0.25
SPG11-212ENST00000558790 CYP27B1O15528 508 aa13.47□□□□□ -0.25
SPG11-212ENST00000558790 HSPA1AP0DMV8 641 aaKnown RBP13.47□□□□□ -0.25
SPG11-212ENST00000558790 HSPA1BP0DMV9 641 aaKnown RBP13.47□□□□□ -0.25
SPG11-212ENST00000558790 TTLL12Q14166 644 aaPredicted RBP13.47□□□□□ -0.25
SPG11-212ENST00000558790 MPRIPQ6WCQ1 1025 aa13.47□□□□□ -0.25
SPG11-212ENST00000558790 AMIGO3Q86WK7 504 aa13.47□□□□□ -0.25
SPG11-212ENST00000558790 RBM46Q8TBY0 533 aaKnown RBP13.47□□□□□ -0.25
SPG11-212ENST00000558790 PCDH10Q9P2E7 1040 aa13.47□□□□□ -0.25
SPG11-212ENST00000558790 VPS9D1Q9Y2B5 631 aa13.47□□□□□ -0.25
SPG11-212ENST00000558790 MDM2Q00987 491 aaPredicted RBP13.46□□□□□ -0.25
SPG11-212ENST00000558790 PARP9Q8IXQ6 854 aa13.46□□□□□ -0.25
SPG11-212ENST00000558790 CD2APQ9Y5K6 639 aa13.46□□□□□ -0.25
SPG11-212ENST00000558790 ZNF831Q5JPB2 1677 aa13.46□□□□□ -0.26
SPG11-212ENST00000558790 VIRMAQ69YN4 1812 aaKnown RBP13.46□□□□□ -0.26
SPG11-212ENST00000558790 LSM11P83369 360 aaKnown RBP eCLIP13.45□□□□□ -0.26
SPG11-212ENST00000558790 EYA1Q99502 592 aa13.45□□□□□ -0.26
SPG11-212ENST00000558790 REPIN1Q9BWE0 567 aaKnown RBP13.45□□□□□ -0.26
SPG11-212ENST00000558790 SEPT9Q9UHD8 586 aaPredicted RBP13.45□□□□□ -0.26
SPG11-212ENST00000558790 EMILIN1Q9Y6C2 1016 aa13.45□□□□□ -0.26
SPG11-212ENST00000558790 SLC4A5Q9BY07 1137 aa13.44□□□□□ -0.26
SPG11-212ENST00000558790 MYH14Q7Z406 1995 aaKnown RBP13.43□□□□□ -0.26
SPG11-212ENST00000558790 POTEGQ6S5H5 508 aa13.43□□□□□ -0.26
SPG11-212ENST00000558790 SMIM5Q71RC9 77 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms