RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 ZNF853P0CG23 659 aa11.16□□□□□ -0.62
TRPM1-208ENST00000558768 PCK1P35558 622 aa11.16□□□□□ -0.62
TRPM1-208ENST00000558768 EFCAB2Q5VUJ9 269 aa11.16□□□□□ -0.62
TRPM1-208ENST00000558768 RPUSD2Q8IZ73 545 aaKnown RBP11.16□□□□□ -0.62
TRPM1-208ENST00000558768 CCDC150Q8NCX0 1101 aa11.16□□□□□ -0.62
TRPM1-208ENST00000558768 SENP3Q9H4L4 574 aaPredicted RBP11.16□□□□□ -0.62
TRPM1-208ENST00000558768 VPS18Q9P253 973 aa11.16□□□□□ -0.62
TRPM1-208ENST00000558768 USO1O60763 962 aaKnown RBP11.16□□□□□ -0.62
TRPM1-208ENST00000558768 MKRN1Q9UHC7 482 aaKnown RBP11.16□□□□□ -0.62
TRPM1-208ENST00000558768 DMRT2Q9Y5R5 561 aa11.16□□□□□ -0.62
TRPM1-208ENST00000558768 TACC1O75410 805 aa11.15□□□□□ -0.62
TRPM1-208ENST00000558768 HCLS1P14317 486 aaPredicted RBP11.15□□□□□ -0.62
TRPM1-208ENST00000558768 U2AF2P26368 475 aaKnown RBP eCLIP11.15□□□□□ -0.62
TRPM1-208ENST00000558768 EIF5P55010 431 aaKnown RBP11.15□□□□□ -0.62
TRPM1-208ENST00000558768 CNTROBQ8N137 903 aa11.15□□□□□ -0.62
TRPM1-208ENST00000558768 TAOK3Q9H2K8 898 aa11.15□□□□□ -0.62
TRPM1-208ENST00000558768 CYP46A1Q9Y6A2 500 aa11.15□□□□□ -0.62
TRPM1-208ENST00000558768 MICAL1Q8TDZ2 1067 aa11.15□□□□□ -0.62
TRPM1-208ENST00000558768 ZNF692Q9BU19 519 aaPredicted RBP11.15□□□□□ -0.62
TRPM1-208ENST00000558768 TMEM63CQ9P1W3 806 aa11.15□□□□□ -0.62
TRPM1-208ENST00000558768 CCDC141Q6ZP82 1450 aa11.15□□□□□ -0.63
TRPM1-208ENST00000558768 ARHGAP25P42331 645 aa11.14□□□□□ -0.63
TRPM1-208ENST00000558768 CLEC17AQ6ZS10 378 aa11.14□□□□□ -0.63
TRPM1-208ENST00000558768 RPAP2Q8IXW5 612 aaPredicted RBP11.14□□□□□ -0.63
TRPM1-208ENST00000558768 KIAA0586Q9BVV6 1533 aa11.14□□□□□ -0.63
TRPM1-208ENST00000558768 ZNF365Q70YC5 407 aa11.14□□□□□ -0.63
TRPM1-208ENST00000558768 SCAF11Q99590 1463 aaKnown RBP11.14□□□□□ -0.63
TRPM1-208ENST00000558768 IL16Q14005 1332 aa11.14□□□□□ -0.63
TRPM1-208ENST00000558768 GSTTP1A0A1W2PQM5 241 aa11.14□□□□□ -0.63
TRPM1-208ENST00000558768 RIOK3O14730 519 aaKnown RBP11.14□□□□□ -0.63
TRPM1-208ENST00000558768 CKAP4Q07065 602 aaKnown RBP11.14□□□□□ -0.63
TRPM1-208ENST00000558768 CFAP70Q5T0N1 1121 aa11.14□□□□□ -0.63
TRPM1-208ENST00000558768 CACNA2D3Q8IZS8 1091 aa11.14□□□□□ -0.63
TRPM1-208ENST00000558768 DDX19AQ9NUU7 478 aaKnown RBP11.14□□□□□ -0.63
TRPM1-208ENST00000558768 CTAGE15A4D2H0 777 aa11.14□□□□□ -0.63
TRPM1-208ENST00000558768 CTAGE8P0CG41 777 aa11.14□□□□□ -0.63
TRPM1-208ENST00000558768 MX1P20591 662 aa11.14□□□□□ -0.63
TRPM1-208ENST00000558768 CETN2P41208 172 aa11.14□□□□□ -0.63
TRPM1-208ENST00000558768 CCDC38Q502W7 563 aa11.14□□□□□ -0.63
TRPM1-208ENST00000558768 CTAGE6Q86UF2 777 aa11.14□□□□□ -0.63
TRPM1-208ENST00000558768 CTAGE4Q8IX94 777 aa11.14□□□□□ -0.63
TRPM1-208ENST00000558768 CCDC12Q8WUD4 166 aaPredicted RBP11.14□□□□□ -0.63
TRPM1-208ENST00000558768 HIP1O00291 1037 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 UBE2HP62256 183 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 LMOD2Q6P5Q4 547 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 ARHGEF11O15085 1522 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 IQGAP2Q13576 1575 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 FAM177BA6PVY3 158 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 CEP120Q8N960 986 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 TSC1Q92574 1164 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 JPH4Q96JJ6 628 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 SLC12A5Q9H2X9 1139 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 KDM4AO75164 1064 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 G3BP1Q13283 466 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRPM1-208ENST00000558768 PPP2R5AQ15172 486 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 TSNAXIP1Q2TAA8 658 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 TTC22Q5TAA0 569 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 TMX3Q96JJ7 454 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 CCDC43Q96MW1 224 aaKnown RBP11.13□□□□□ -0.63
TRPM1-208ENST00000558768 TCEAL9Q9UHQ7 104 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 ABCC2Q92887 1545 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 SOX12O15370 315 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 GOLGA1Q92805 767 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 ERO1AQ96HE7 468 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 IFT74Q96LB3 600 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 TTC14Q96N46 770 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 PPP1R12CQ9BZL4 782 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 VEZTQ9HBM0 779 aa11.13□□□□□ -0.63
TRPM1-208ENST00000558768 ZNF165P49910 485 aa11.12□□□□□ -0.63
TRPM1-208ENST00000558768 CPLX4Q7Z7G2 160 aa11.12□□□□□ -0.63
TRPM1-208ENST00000558768 CERS3Q8IU89 383 aa11.12□□□□□ -0.63
TRPM1-208ENST00000558768 ZGPATQ8N5A5 531 aaKnown RBP11.12□□□□□ -0.63
TRPM1-208ENST00000558768 EHBP1Q8NDI1 1231 aa11.12□□□□□ -0.63
TRPM1-208ENST00000558768 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRPM1-208ENST00000558768 NSD3Q9BZ95 1437 aa11.12□□□□□ -0.63
TRPM1-208ENST00000558768 MAP3K9P80192 1104 aa11.12□□□□□ -0.63
TRPM1-208ENST00000558768 CTCFLQ8NI51 663 aaPredicted RBP11.12□□□□□ -0.63
TRPM1-208ENST00000558768 FAM114A2Q9NRY5 505 aa11.12□□□□□ -0.63
TRPM1-208ENST00000558768 ATP2B1P20020 1258 aa11.12□□□□□ -0.63
TRPM1-208ENST00000558768 SAFB2Q14151 953 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRPM1-208ENST00000558768 MAP7Q14244 749 aa11.12□□□□□ -0.63
TRPM1-208ENST00000558768 FAM76AQ8TAV0 307 aa11.12□□□□□ -0.63
TRPM1-208ENST00000558768 GDPD2Q9HCC8 539 aa11.12□□□□□ -0.63
TRPM1-208ENST00000558768 DNAI1Q9UI46 699 aa11.12□□□□□ -0.63
TRPM1-208ENST00000558768 BUB1BO60566 1050 aaPredicted RBP11.11□□□□□ -0.63
TRPM1-208ENST00000558768 ZSCAN20P17040 1043 aaPredicted RBP11.11□□□□□ -0.63
TRPM1-208ENST00000558768 CEP128Q6ZU80 1094 aa11.11□□□□□ -0.63
TRPM1-208ENST00000558768 ZSWIM4Q9H7M6 989 aa11.11□□□□□ -0.63
TRPM1-208ENST00000558768 ADGRL2O95490 1459 aa11.11□□□□□ -0.63
TRPM1-208ENST00000558768 GPATCH8Q9UKJ3 1502 aaKnown RBP11.11□□□□□ -0.63
TRPM1-208ENST00000558768 SKILP12757 684 aa11.11□□□□□ -0.63
TRPM1-208ENST00000558768 ZSCAN26Q16670 478 aa11.11□□□□□ -0.63
TRPM1-208ENST00000558768 CCDC155Q8N6L0 562 aa11.11□□□□□ -0.63
TRPM1-208ENST00000558768 GBP7Q8N8V2 638 aaPredicted RBP11.11□□□□□ -0.63
TRPM1-208ENST00000558768 SMC6Q96SB8 1091 aa11.11□□□□□ -0.63
TRPM1-208ENST00000558768 USP26Q9BXU7 913 aa11.11□□□□□ -0.63
TRPM1-208ENST00000558768 EIF2AK4Q9P2K8 1649 aaKnown RBP11.11□□□□□ -0.63
TRPM1-208ENST00000558768 CASTP20810 708 aaKnown RBP11.11□□□□□ -0.63
TRPM1-208ENST00000558768 C9orf78Q9NZ63 289 aaPredicted RBP11.11□□□□□ -0.63
TRPM1-208ENST00000558768 TWISTNBQ3B726 338 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms