RNA–Protein interactions for RNA: ENST00000558509.5

IDH3A-205, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4

Gene IDH3A, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-205ENST00000558509 RTF1Q92541 710 aaKnown RBP19.83■□□□□ 0.77
IDH3A-205ENST00000558509 PLEKHF1Q96S99 279 aa19.83■□□□□ 0.77
IDH3A-205ENST00000558509 THUMPD2Q9BTF0 503 aaKnown RBP19.83■□□□□ 0.77
IDH3A-205ENST00000558509 SNRPA1P09661 255 aaKnown RBP19.82■□□□□ 0.76
IDH3A-205ENST00000558509 SETDB2Q96T68 719 aa19.82■□□□□ 0.76
IDH3A-205ENST00000558509 PDE6BP35913 854 aa19.81■□□□□ 0.76
IDH3A-205ENST00000558509 ZC3H4Q9UPT8 1303 aaKnown RBP19.8■□□□□ 0.76
IDH3A-205ENST00000558509 POTECB2RU33 542 aa19.8■□□□□ 0.76
IDH3A-205ENST00000558509 HTATSF1O43719 755 aaKnown RBP19.8■□□□□ 0.76
IDH3A-205ENST00000558509 SRGNP10124 158 aa19.8■□□□□ 0.76
IDH3A-205ENST00000558509 HLFQ16534 295 aa19.8■□□□□ 0.76
IDH3A-205ENST00000558509 GLTPD2A6NH11 291 aa19.79■□□□□ 0.76
IDH3A-205ENST00000558509 TAF7Q15545 349 aaPredicted RBP19.79■□□□□ 0.76
IDH3A-205ENST00000558509 PRPF40BQ6NWY9 871 aaKnown RBP19.79■□□□□ 0.76
IDH3A-205ENST00000558509 OLFM4Q6UX06 510 aa19.78■□□□□ 0.76
IDH3A-205ENST00000558509 C16orf71Q8IYS4 520 aaPredicted RBP19.78■□□□□ 0.76
IDH3A-205ENST00000558509 FSTL1Q12841 308 aa19.77■□□□□ 0.76
IDH3A-205ENST00000558509 STYK1Q6J9G0 422 aa19.77■□□□□ 0.76
IDH3A-205ENST00000558509 ABCC12Q96J65 1359 aa19.77■□□□□ 0.76
IDH3A-205ENST00000558509 FAM177BA6PVY3 158 aa19.76■□□□□ 0.75
IDH3A-205ENST00000558509 ST5P78524 1137 aa19.76■□□□□ 0.75
IDH3A-205ENST00000558509 SLC51AQ86UW1 340 aa19.76■□□□□ 0.75
IDH3A-205ENST00000558509 NBPF5PQ86XG9 351 aaPredicted RBP19.76■□□□□ 0.75
IDH3A-205ENST00000558509 C7orf43Q8WVR3 580 aa19.76■□□□□ 0.75
IDH3A-205ENST00000558509 NFE2L2Q16236 605 aa19.75■□□□□ 0.75
IDH3A-205ENST00000558509 IFFO2Q5TF58 517 aa19.75■□□□□ 0.75
IDH3A-205ENST00000558509 CLEC4GQ6UXB4 293 aa19.75■□□□□ 0.75
IDH3A-205ENST00000558509 NIP7Q9Y221 180 aaKnown RBP eCLIP19.75■□□□□ 0.75
IDH3A-205ENST00000558509 LTBP3Q9NS15 1303 aa19.75■□□□□ 0.75
IDH3A-205ENST00000558509 NPHP1O15259 732 aa19.74■□□□□ 0.75
IDH3A-205ENST00000558509 EIF4A1P60842 406 aaKnown RBP19.74■□□□□ 0.75
IDH3A-205ENST00000558509 TTLL7Q6ZT98 887 aa19.74■□□□□ 0.75
IDH3A-205ENST00000558509 NPM2Q86SE8 214 aaKnown RBP19.74■□□□□ 0.75
IDH3A-205ENST00000558509 MASTLQ96GX5 879 aa19.74■□□□□ 0.75
IDH3A-205ENST00000558509 PDZRN3Q9UPQ7 1066 aa19.74■□□□□ 0.75
IDH3A-205ENST00000558509 SNED1Q8TER0 1413 aa19.74■□□□□ 0.75
IDH3A-205ENST00000558509 NGEFQ8N5V2 710 aa19.73■□□□□ 0.75
IDH3A-205ENST00000558509 CNKSR1Q969H4 720 aa19.73■□□□□ 0.75
IDH3A-205ENST00000558509 TAOK3Q9H2K8 898 aa19.73■□□□□ 0.75
IDH3A-205ENST00000558509 PCNTO95613 3336 aa19.73■□□□□ 0.75
IDH3A-205ENST00000558509 COL4A5P29400 1685 aa19.72■□□□□ 0.75
IDH3A-205ENST00000558509 KLRG2A4D1S0 409 aaPredicted RBP19.72■□□□□ 0.75
IDH3A-205ENST00000558509 ERFEQ4G0M1 354 aa19.72■□□□□ 0.75
IDH3A-205ENST00000558509 SMC1BQ8NDV3 1235 aa19.72■□□□□ 0.75
IDH3A-205ENST00000558509 ZNF652Q9Y2D9 606 aa19.72■□□□□ 0.75
IDH3A-205ENST00000558509 ANKRD36CQ5JPF3 1778 aa19.72■□□□□ 0.75
IDH3A-205ENST00000558509 LAMB2P55268 1798 aa19.71■□□□□ 0.75
IDH3A-205ENST00000558509 POTEIP0CG38 1075 aa19.71■□□□□ 0.75
IDH3A-205ENST00000558509 POTEJP0CG39 1038 aa19.71■□□□□ 0.75
IDH3A-205ENST00000558509 VEGFAP15692 232 aaPredicted RBP19.71■□□□□ 0.75
IDH3A-205ENST00000558509 KLRG1Q96E93 195 aa19.71■□□□□ 0.75
IDH3A-205ENST00000558509 UBN2Q6ZU65 1347 aa19.71■□□□□ 0.75
IDH3A-205ENST00000558509 DDNO94850 711 aaPredicted RBP19.7■□□□□ 0.74
IDH3A-205ENST00000558509 NUTM1Q86Y26 1132 aa19.7■□□□□ 0.74
IDH3A-205ENST00000558509 MYL6BP14649 208 aa19.69■□□□□ 0.74
IDH3A-205ENST00000558509 RRP7AQ9Y3A4 280 aaKnown RBP19.69■□□□□ 0.74
IDH3A-205ENST00000558509 ADAMTSL1Q8N6G6 1762 aa19.68■□□□□ 0.74
IDH3A-205ENST00000558509 SCN4AP35499 1836 aa19.68■□□□□ 0.74
IDH3A-205ENST00000558509 RGL2O15211 777 aa19.68■□□□□ 0.74
IDH3A-205ENST00000558509 NPR1P16066 1061 aa19.68■□□□□ 0.74
IDH3A-205ENST00000558509 LRP10Q7Z4F1 713 aa19.68■□□□□ 0.74
IDH3A-205ENST00000558509 ZBTB3Q9H5J0 574 aa19.68■□□□□ 0.74
IDH3A-205ENST00000558509 MAP3K15Q6ZN16 1313 aa19.68■□□□□ 0.74
IDH3A-205ENST00000558509 ZNF541Q9H0D2 1346 aa19.68■□□□□ 0.74
IDH3A-205ENST00000558509 GPTP24298 496 aa19.67■□□□□ 0.74
IDH3A-205ENST00000558509 JMYQ8N9B5 988 aa19.67■□□□□ 0.74
IDH3A-205ENST00000558509 ZNF277Q9NRM2 450 aaPredicted RBP19.67■□□□□ 0.74
IDH3A-205ENST00000558509 LTBP1Q14766 1721 aa19.66■□□□□ 0.74
IDH3A-205ENST00000558509 PROSER3Q2NL68 480 aa19.66■□□□□ 0.74
IDH3A-205ENST00000558509 CCDC93Q567U6 631 aa19.66■□□□□ 0.74
IDH3A-205ENST00000558509 TPTE2Q6XPS3 522 aa19.66■□□□□ 0.74
IDH3A-205ENST00000558509 C3orf67Q6ZVT6 689 aa19.66■□□□□ 0.74
IDH3A-205ENST00000558509 PNISRQ8TF01 805 aaKnown RBP19.66■□□□□ 0.74
IDH3A-205ENST00000558509 MAPK8IP3Q9UPT6 1336 aa19.66■□□□□ 0.74
IDH3A-205ENST00000558509 ANXA1P04083 346 aa19.65■□□□□ 0.74
IDH3A-205ENST00000558509 PDIA6Q15084 440 aa19.65■□□□□ 0.74
IDH3A-205ENST00000558509 ERVV-1B6SEH8 477 aa19.64■□□□□ 0.73
IDH3A-205ENST00000558509 FKBP4Q02790 459 aaKnown RBP eCLIP19.64■□□□□ 0.73
IDH3A-205ENST00000558509 CRY2Q49AN0 593 aa19.64■□□□□ 0.73
IDH3A-205ENST00000558509 SUSD4Q5VX71 490 aa19.64■□□□□ 0.73
IDH3A-205ENST00000558509 RIC1Q4ADV7 1423 aa19.64■□□□□ 0.73
IDH3A-205ENST00000558509 TAF1P21675 1872 aa19.64■□□□□ 0.73
IDH3A-205ENST00000558509 IBTKQ9P2D0 1353 aaPredicted RBP19.63■□□□□ 0.73
IDH3A-205ENST00000558509 NEFMP07197 916 aa19.63■□□□□ 0.73
IDH3A-205ENST00000558509 SOGA3Q5TF21 947 aa19.63■□□□□ 0.73
IDH3A-205ENST00000558509 DPY19L2Q6NUT2 758 aa19.63■□□□□ 0.73
IDH3A-205ENST00000558509 NTSR2O95665 410 aa19.62■□□□□ 0.73
IDH3A-205ENST00000558509 RIPK4P57078 832 aa19.62■□□□□ 0.73
IDH3A-205ENST00000558509 KRT24Q2M2I5 525 aa19.62■□□□□ 0.73
IDH3A-205ENST00000558509 KIF6Q6ZMV9 814 aa19.62■□□□□ 0.73
IDH3A-205ENST00000558509 CCDC146Q8IYE0 955 aa19.62■□□□□ 0.73
IDH3A-205ENST00000558509 ZNF34Q8IZ26 560 aa19.62■□□□□ 0.73
IDH3A-205ENST00000558509 TSPYL4Q9UJ04 414 aa19.62■□□□□ 0.73
IDH3A-205ENST00000558509 TMPOP42166 694 aaKnown RBP19.61■□□□□ 0.73
IDH3A-205ENST00000558509 DDX10Q13206 875 aaKnown RBP19.6■□□□□ 0.73
IDH3A-205ENST00000558509 L3MBTL3Q96JM7 780 aaPredicted RBP19.6■□□□□ 0.73
IDH3A-205ENST00000558509 DDX60Q8IY21 1712 aaKnown RBP19.59■□□□□ 0.73
IDH3A-205ENST00000558509 COL4A1P02462 1669 aa19.59■□□□□ 0.73
IDH3A-205ENST00000558509 EIF2S2P20042 333 aaKnown RBP19.59■□□□□ 0.73
IDH3A-205ENST00000558509 GTF2E1P29083 439 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms