RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 NUP62CLQ9H1M0 184 aa18.37■□□□□ 0.53
AP4E1-202ENST00000558439 DNM1Q05193 864 aaKnown RBP18.37■□□□□ 0.53
AP4E1-202ENST00000558439 LRRC7Q96NW7 1537 aa18.36■□□□□ 0.53
AP4E1-202ENST00000558439 LMTK2Q8IWU2 1503 aa18.36■□□□□ 0.53
AP4E1-202ENST00000558439 GUCY1B3Q02153 619 aa18.36■□□□□ 0.53
AP4E1-202ENST00000558439 IP6K1Q92551 441 aa18.36■□□□□ 0.53
AP4E1-202ENST00000558439 ORAI2Q96SN7 254 aa18.36■□□□□ 0.53
AP4E1-202ENST00000558439 ADGRB1O14514 1584 aa18.36■□□□□ 0.53
AP4E1-202ENST00000558439 TRDNQ13061 729 aa18.36■□□□□ 0.53
AP4E1-202ENST00000558439 CABLES1Q8TDN4 633 aa18.36■□□□□ 0.53
AP4E1-202ENST00000558439 TMEM63CQ9P1W3 806 aa18.36■□□□□ 0.53
AP4E1-202ENST00000558439 NFATC2IPQ8NCF5 419 aa18.35■□□□□ 0.53
AP4E1-202ENST00000558439 PTCH1Q13635 1447 aa18.35■□□□□ 0.53
AP4E1-202ENST00000558439 PRDM11Q9NQV5 511 aa18.35■□□□□ 0.53
AP4E1-202ENST00000558439 DDX46Q7L014 1031 aaKnown RBP18.35■□□□□ 0.53
AP4E1-202ENST00000558439 SIRT1Q96EB6 747 aa18.35■□□□□ 0.53
AP4E1-202ENST00000558439 SH2B1Q9NRF2 756 aaPredicted RBP18.35■□□□□ 0.53
AP4E1-202ENST00000558439 CFAP74Q9C0B2 1584 aa18.35■□□□□ 0.53
AP4E1-202ENST00000558439 NRXN1Q9ULB1 1477 aa18.34■□□□□ 0.53
AP4E1-202ENST00000558439 GADD45BO75293 160 aaPredicted RBP18.34■□□□□ 0.53
AP4E1-202ENST00000558439 ALKQ9UM73 1620 aa18.34■□□□□ 0.53
AP4E1-202ENST00000558439 SYT1P21579 422 aa18.34■□□□□ 0.53
AP4E1-202ENST00000558439 NMIQ13287 307 aaPredicted RBP18.34■□□□□ 0.53
AP4E1-202ENST00000558439 LRRFIP1Q32MZ4 808 aaKnown RBP18.34■□□□□ 0.53
AP4E1-202ENST00000558439 ZBTB3Q9H5J0 574 aa18.34■□□□□ 0.53
AP4E1-202ENST00000558439 ADCY5O95622 1261 aa18.34■□□□□ 0.53
AP4E1-202ENST00000558439 ME1P48163 572 aa18.34■□□□□ 0.53
AP4E1-202ENST00000558439 ANKRD13DQ6ZTN6 518 aa18.34■□□□□ 0.53
AP4E1-202ENST00000558439 KIF24Q5T7B8 1368 aa18.33■□□□□ 0.53
AP4E1-202ENST00000558439 NFXL1Q6ZNB6 911 aa18.33■□□□□ 0.53
AP4E1-202ENST00000558439 PTPRMP28827 1452 aa18.33■□□□□ 0.53
AP4E1-202ENST00000558439 TPM4P67936 248 aa18.33■□□□□ 0.52
AP4E1-202ENST00000558439 FAM173BQ6P4H8 233 aa18.33■□□□□ 0.52
AP4E1-202ENST00000558439 SYNE3Q6ZMZ3 975 aa18.33■□□□□ 0.52
AP4E1-202ENST00000558439 CREBRFQ8IUR6 639 aa18.33■□□□□ 0.52
AP4E1-202ENST00000558439 STK11IPQ8N1F8 1099 aa18.33■□□□□ 0.52
AP4E1-202ENST00000558439 SNX14Q9Y5W7 946 aa18.33■□□□□ 0.52
AP4E1-202ENST00000558439 SGSM2O43147 1006 aa18.33■□□□□ 0.52
AP4E1-202ENST00000558439 KINO60870 393 aaKnown RBP18.33■□□□□ 0.52
AP4E1-202ENST00000558439 EIF4A1P60842 406 aaKnown RBP18.33■□□□□ 0.52
AP4E1-202ENST00000558439 CCT2P78371 535 aaKnown RBP18.33■□□□□ 0.52
AP4E1-202ENST00000558439 BICC1Q9H694 974 aaKnown RBP18.33■□□□□ 0.52
AP4E1-202ENST00000558439 A2ML1A8K2U0 1454 aa18.33■□□□□ 0.52
AP4E1-202ENST00000558439 MAP3K11Q16584 847 aa18.32■□□□□ 0.52
AP4E1-202ENST00000558439 LINS1Q8NG48 757 aa18.32■□□□□ 0.52
AP4E1-202ENST00000558439 SNRKQ9NRH2 765 aa18.32■□□□□ 0.52
AP4E1-202ENST00000558439 NDUFB9Q9Y6M9 179 aa18.32■□□□□ 0.52
AP4E1-202ENST00000558439 TSPOAP1O95153 1857 aa18.32■□□□□ 0.52
AP4E1-202ENST00000558439 RNMTO43148 476 aaKnown RBP18.32■□□□□ 0.52
AP4E1-202ENST00000558439 UBE2HP62256 183 aa18.32■□□□□ 0.52
AP4E1-202ENST00000558439 CEP126Q9P2H0 1117 aa18.32■□□□□ 0.52
AP4E1-202ENST00000558439 INTS4Q96HW7 963 aaKnown RBP18.32■□□□□ 0.52
AP4E1-202ENST00000558439 CDK12Q9NYV4 1490 aaPredicted RBP18.32■□□□□ 0.52
AP4E1-202ENST00000558439 GOLIM4O00461 696 aa18.31■□□□□ 0.52
AP4E1-202ENST00000558439 CPLX2Q6PUV4 134 aaKnown RBP18.31■□□□□ 0.52
AP4E1-202ENST00000558439 GPT2Q8TD30 523 aa18.31■□□□□ 0.52
AP4E1-202ENST00000558439 FAM227BQ96M60 508 aa18.31■□□□□ 0.52
AP4E1-202ENST00000558439 ARHGEF10O15013 1369 aa18.31■□□□□ 0.52
AP4E1-202ENST00000558439 MROH2AA6NES4 1674 aa18.31■□□□□ 0.52
AP4E1-202ENST00000558439 F13A1P00488 732 aa18.31■□□□□ 0.52
AP4E1-202ENST00000558439 CCDC57Q2TAC2 916 aa18.31■□□□□ 0.52
AP4E1-202ENST00000558439 TTC39AQ5SRH9 613 aa18.31■□□□□ 0.52
AP4E1-202ENST00000558439 NEXMIFQ5QGS0 1516 aa18.31■□□□□ 0.52
AP4E1-202ENST00000558439 ALDH1L1O75891 902 aa18.31■□□□□ 0.52
AP4E1-202ENST00000558439 SSH3Q8TE77 659 aa18.3■□□□□ 0.52
AP4E1-202ENST00000558439 TTC12Q9H892 705 aaPredicted RBP18.3■□□□□ 0.52
AP4E1-202ENST00000558439 USP6P35125 1406 aa18.3■□□□□ 0.52
AP4E1-202ENST00000558439 ATP2B1P20020 1258 aa18.3■□□□□ 0.52
AP4E1-202ENST00000558439 KRT32Q14532 448 aa18.3■□□□□ 0.52
AP4E1-202ENST00000558439 CCDC158Q5M9N0 1113 aa18.3■□□□□ 0.52
AP4E1-202ENST00000558439 KIAA1210Q9ULL0 1709 aa18.3■□□□□ 0.52
AP4E1-202ENST00000558439 ARHGEF40Q8TER5 1519 aa18.3■□□□□ 0.52
AP4E1-202ENST00000558439 GTF2E1P29083 439 aaPredicted RBP18.3■□□□□ 0.52
AP4E1-202ENST00000558439 ZNF445P59923 1031 aa18.29■□□□□ 0.52
AP4E1-202ENST00000558439 CREB3L3Q68CJ9 461 aa18.29■□□□□ 0.52
AP4E1-202ENST00000558439 IGSF1Q8N6C5 1336 aa18.28■□□□□ 0.52
AP4E1-202ENST00000558439 STK38Q15208 465 aa18.28■□□□□ 0.52
AP4E1-202ENST00000558439 RAB11FIP4Q86YS3 637 aa18.28■□□□□ 0.52
AP4E1-202ENST00000558439 EDC3Q96F86 508 aaKnown RBP18.28■□□□□ 0.52
AP4E1-202ENST00000558439 BRD1O95696 1058 aa18.28■□□□□ 0.52
AP4E1-202ENST00000558439 BRF1Q92994 677 aa18.28■□□□□ 0.52
AP4E1-202ENST00000558439 HSPA4P34932 840 aa18.28■□□□□ 0.52
AP4E1-202ENST00000558439 LMBR1LQ6UX01 489 aa18.28■□□□□ 0.52
AP4E1-202ENST00000558439 IFNL2Q8IZJ0 200 aa18.28■□□□□ 0.52
AP4E1-202ENST00000558439 IFIT1P09914 478 aaKnown RBP18.27■□□□□ 0.52
AP4E1-202ENST00000558439 FILIP1Q7Z7B0 1213 aa18.27■□□□□ 0.52
AP4E1-202ENST00000558439 RASEFQ8IZ41 740 aa18.27■□□□□ 0.52
AP4E1-202ENST00000558439 VWDEQ8N2E2 1590 aa18.27■□□□□ 0.52
AP4E1-202ENST00000558439 CNNM1Q9NRU3 951 aa18.27■□□□□ 0.52
AP4E1-202ENST00000558439 CAMSAP1Q5T5Y3 1602 aa18.27■□□□□ 0.52
AP4E1-202ENST00000558439 PRAMEF22A3QJZ6 481 aa18.27■□□□□ 0.52
AP4E1-202ENST00000558439 RRP9O43818 475 aaKnown RBP18.27■□□□□ 0.52
AP4E1-202ENST00000558439 TRIM29Q14134 588 aa18.27■□□□□ 0.52
AP4E1-202ENST00000558439 PROSER3Q2NL68 480 aa18.27■□□□□ 0.52
AP4E1-202ENST00000558439 IBTKQ9P2D0 1353 aaPredicted RBP18.27■□□□□ 0.52
AP4E1-202ENST00000558439 TTC41PQ6P2S7 1318 aa18.27■□□□□ 0.52
AP4E1-202ENST00000558439 HAND2P61296 217 aa18.27■□□□□ 0.52
AP4E1-202ENST00000558439 SUCLG2Q96I99 432 aa18.27■□□□□ 0.52
AP4E1-202ENST00000558439 NEK1Q96PY6 1258 aa18.27■□□□□ 0.52
AP4E1-202ENST00000558439 TPD52L1Q16890 204 aaPredicted RBP18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms