RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 DPYDQ12882 1025 aa2.1□□□□□ -2.07
CTDSPL2-202ENST00000558373 PUS10Q3MIT2 529 aaKnown RBP2.1□□□□□ -2.07
CTDSPL2-202ENST00000558373 OXLD1Q5BKU9 147 aa2.1□□□□□ -2.07
CTDSPL2-202ENST00000558373 KRTAP1-3Q8IUG1 177 aa2.1□□□□□ -2.07
CTDSPL2-202ENST00000558373 ZNF511Q8NB15 262 aa2.1□□□□□ -2.07
CTDSPL2-202ENST00000558373 NEUROD4Q9HD90 331 aa2.1□□□□□ -2.07
CTDSPL2-202ENST00000558373 EMILIN1Q9Y6C2 1016 aa2.1□□□□□ -2.07
CTDSPL2-202ENST00000558373 HNRNPUQ00839 825 aaKnown RBP eCLIP2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 NCOA4Q13772 614 aa2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 GNL2Q13823 731 aaKnown RBP2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 EAPPQ56P03 285 aaPredicted RBP2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 ZNF513Q8N8E2 541 aaPredicted RBP2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 NANOS1Q8WY41 292 aaKnown RBP2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 NLRP3Q96P20 1036 aa2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 BCL2L13Q9BXK5 485 aa2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 FNDC3AQ9Y2H6 1198 aaKnown RBP2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP34Q70CQ2 3546 aa2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 TMEM229AB2RXF0 380 aa2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 CDK2AP1O14519 115 aa2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 RBL2Q08999 1139 aa2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 ALG1LQ6GMV1 187 aa2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 VASH1Q7L8A9 365 aaPredicted RBP2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 GPR161Q8N6U8 529 aaKnown RBP2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 ASB16Q96NS5 453 aa2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 TINF2Q9BSI4 451 aa2.09□□□□□ -2.07
CTDSPL2-202ENST00000558373 IGHA1P01876 353 aa2.09□□□□□ -2.08
CTDSPL2-202ENST00000558373 BRD2P25440 801 aaKnown RBP2.09□□□□□ -2.08
CTDSPL2-202ENST00000558373 XKR5Q6UX68 686 aa2.09□□□□□ -2.08
CTDSPL2-202ENST00000558373 BAP1Q92560 729 aa2.09□□□□□ -2.08
CTDSPL2-202ENST00000558373 TRERF1Q96PN7 1200 aa2.09□□□□□ -2.08
CTDSPL2-202ENST00000558373 PURBQ96QR8 312 aaKnown RBP2.09□□□□□ -2.08
CTDSPL2-202ENST00000558373 FAM181BA6NEQ2 426 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 MAPK1P28482 360 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 GPC1P35052 558 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 XPCQ01831 940 aaPredicted RBP2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 CDCA8Q53HL2 280 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 GNASQ5JWF2 1037 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 ZNF385CQ66K41 422 aaPredicted RBP2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 FBF1Q8TES7 1133 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 XAGE2Q96GT9 111 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 KCTD15Q96SI1 283 aaPredicted RBP2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 EPB42P16452 691 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 RASSF7Q02833 373 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 RC3H1Q5TC82 1133 aaKnown RBP2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 VPS37DQ86XT2 251 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 HELQQ8TDG4 1101 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 SYMPKQ92797 1274 aaKnown RBP2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 RBCK1Q9BYM8 510 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 DNAJC25Q9H1X3 360 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 EFCC1Q9HA90 598 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 MRS2Q9HD23 443 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 METTL5Q9NRN9 209 aaKnown RBP2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 NLRP2Q9NX02 1062 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 MAP10Q9P2G4 905 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 PSMA6P60900 246 aaKnown RBP2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 TEAD4Q15561 434 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 GIGYF1O75420 1035 aaPredicted RBP2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 ERVK-9P63128 1117 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 KRTAP19-1Q8IUB9 90 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 KIAA1024Q9UPX6 916 aa2.08□□□□□ -2.08
CTDSPL2-202ENST00000558373 ATAD2Q6PL18 1390 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 CLSTN1O94985 981 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 UPP2O95045 317 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 ERFEQ4G0M1 354 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 WDR44Q5JSH3 913 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 C16orf46Q6P387 395 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 NBPF10Q6P3W6 841 aaKnown RBP2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 RGL4Q8IZJ4 473 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 SLC16A10Q8TF71 515 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 ARMC5Q96C12 935 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 SPATA32Q96LK8 384 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 CCDC85AQ96PX6 553 aaPredicted RBP2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 VPS13CQ709C8 3753 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 MAGEB6P1A0A0J9YX57 407 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 LBRQ14739 615 aaKnown RBP2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 C11orf91Q3C1V1 193 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 PPARGC1BQ86YN6 1023 aaKnown RBP2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 EHBP1Q8NDI1 1231 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 VWCEQ96DN2 955 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 MYO19Q96H55 970 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 DRC1Q96MC2 740 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 ZNF281Q9Y2X9 895 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 EML1O00423 815 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 PROCP04070 461 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 RLBP1P12271 317 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 NCLP19338 710 aaKnown RBP2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 GDF10P55107 478 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 ZNF358Q9NW07 568 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 WASF2Q9Y6W5 498 aa2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 SOS2Q07890 1332 aaPredicted RBP2.07□□□□□ -2.08
CTDSPL2-202ENST00000558373 KRTAP4-8A0A0G2JLE6 195 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 ABL1P00519 1130 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 INHAP05111 366 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 TIMP2P16035 220 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 TATP17735 454 aaPredicted RBP2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 SMTNP53814 917 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 RBM10P98175 930 aaKnown RBP2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 TPCN2Q8NHX9 752 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 TMC1Q8TDI8 760 aa2.06□□□□□ -2.08
CTDSPL2-202ENST00000558373 PIK3R5Q8WYR1 880 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms