RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 CNTROBQ8N137 903 aa6.57□□□□□ -1.36
GABPB1-207ENST00000558335 NGDNQ8NEJ9 315 aaKnown RBP6.57□□□□□ -1.36
GABPB1-207ENST00000558335 ZSCAN31Q96LW9 406 aaPredicted RBP6.57□□□□□ -1.36
GABPB1-207ENST00000558335 NBPF4Q96M43 638 aa6.57□□□□□ -1.36
GABPB1-207ENST00000558335 CEP83Q9Y592 693 aa6.57□□□□□ -1.36
GABPB1-207ENST00000558335 RGS12O14924 1447 aa6.57□□□□□ -1.36
GABPB1-207ENST00000558335 TUBGCP6Q96RT7 1819 aa6.57□□□□□ -1.36
GABPB1-207ENST00000558335 MAP3K5Q99683 1374 aa6.57□□□□□ -1.36
GABPB1-207ENST00000558335 XRN1Q8IZH2 1706 aaKnown RBP6.56□□□□□ -1.36
GABPB1-207ENST00000558335 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.56□□□□□ -1.36
GABPB1-207ENST00000558335 TTC41PQ6P2S7 1318 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 RAD50Q92878 1312 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 LMTK3Q96Q04 1460 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 ARHGAP23Q9P227 1491 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 TULP2O00295 520 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 KIF3CO14782 793 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 ZNF500O60304 480 aaPredicted RBP6.56□□□□□ -1.36
GABPB1-207ENST00000558335 IRX5P78411 483 aaPredicted RBP6.56□□□□□ -1.36
GABPB1-207ENST00000558335 RRS1Q15050 365 aaKnown RBP6.56□□□□□ -1.36
GABPB1-207ENST00000558335 MCTP1Q6DN14 999 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 SASS6Q6UVJ0 657 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 LRSAM1Q6UWE0 723 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 AEBP1Q8IUX7 1158 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 OTUD6BQ8N6M0 293 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 KCNH5Q8NCM2 988 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 KIF1BPQ96EK5 621 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 FAM210AQ96ND0 272 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 NCAPGQ9BPX3 1015 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 ESYT1Q9BSJ8 1104 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 C1orf115Q9H7X2 142 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 PHRF1Q9P1Y6 1649 aaKnown RBP6.56□□□□□ -1.36
GABPB1-207ENST00000558335 ADAMTS13Q76LX8 1427 aa6.56□□□□□ -1.36
GABPB1-207ENST00000558335 SOX12O15370 315 aa6.55□□□□□ -1.36
GABPB1-207ENST00000558335 CCDC172P0C7W6 258 aa6.55□□□□□ -1.36
GABPB1-207ENST00000558335 PDCP20941 246 aa6.55□□□□□ -1.36
GABPB1-207ENST00000558335 SSFA2P28290 1259 aa6.55□□□□□ -1.36
GABPB1-207ENST00000558335 NEK4P51957 841 aa6.55□□□□□ -1.36
GABPB1-207ENST00000558335 FLIIQ13045 1269 aa6.55□□□□□ -1.36
GABPB1-207ENST00000558335 FKBP5Q13451 457 aaPredicted RBP6.55□□□□□ -1.36
GABPB1-207ENST00000558335 ANKRD1Q15327 319 aa6.55□□□□□ -1.36
GABPB1-207ENST00000558335 ZSCAN23Q3MJ62 389 aa6.55□□□□□ -1.36
GABPB1-207ENST00000558335 AMOTQ4VCS5 1084 aa6.55□□□□□ -1.36
GABPB1-207ENST00000558335 PRIMPOLQ96LW4 560 aa6.55□□□□□ -1.36
GABPB1-207ENST00000558335 PAIP2Q9BPZ3 127 aaKnown RBP6.55□□□□□ -1.36
GABPB1-207ENST00000558335 THUMPD2Q9BTF0 503 aaKnown RBP6.55□□□□□ -1.36
GABPB1-207ENST00000558335 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.55□□□□□ -1.36
GABPB1-207ENST00000558335 SH2B1Q9NRF2 756 aaPredicted RBP6.55□□□□□ -1.36
GABPB1-207ENST00000558335 LMBRD1Q9NUN5 540 aa6.55□□□□□ -1.36
GABPB1-207ENST00000558335 PEAK1Q9H792 1746 aa6.55□□□□□ -1.36
GABPB1-207ENST00000558335 ROBO2Q9HCK4 1378 aa6.55□□□□□ -1.36
GABPB1-207ENST00000558335 KIF13AQ9H1H9 1805 aa6.55□□□□□ -1.36
GABPB1-207ENST00000558335 GOLGA6L6A8MZA4 724 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 TRIM6-TRIM34B2RNG4 842 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 GOLIM4O00461 696 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 ALDH1L1O75891 902 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 GLRX3O76003 335 aaKnown RBP6.54□□□□□ -1.36
GABPB1-207ENST00000558335 DDX58O95786 925 aaKnown RBP6.54□□□□□ -1.36
GABPB1-207ENST00000558335 CAVIN2O95810 425 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 ZKSCAN1P17029 563 aaPredicted RBP6.54□□□□□ -1.36
GABPB1-207ENST00000558335 PSMA5P28066 241 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 TNNT3P45378 269 aaPredicted RBP6.54□□□□□ -1.36
GABPB1-207ENST00000558335 KIAA2012Q0VF49 1180 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 TRDNQ13061 729 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 RNF20Q5VTR2 975 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 CYB5RLQ6IPT4 315 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 SLC4A10Q6U841 1118 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 CERS3Q8IU89 383 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 TMEM87AQ8NBN3 555 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 SSH3Q8TE77 659 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 MKL1Q969V6 931 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 PDLIM2Q96JY6 352 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 MEIS3Q99687 375 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 TM6SF1Q9BZW5 370 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 TSPY26PQ9H489 355 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 NOL7Q9UMY1 257 aaKnown RBP6.54□□□□□ -1.36
GABPB1-207ENST00000558335 SSUH2Q9Y2M2 353 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 SH3BP1Q9Y3L3 701 aa6.54□□□□□ -1.36
GABPB1-207ENST00000558335 CHD2O14647 1828 aaKnown RBP6.54□□□□□ -1.36
GABPB1-207ENST00000558335 MAP3K19Q56UN5 1328 aa6.53□□□□□ -1.36
GABPB1-207ENST00000558335 PRR36Q9H6K5 1346 aa6.53□□□□□ -1.36
GABPB1-207ENST00000558335 USP42Q9H9J4 1324 aaKnown RBP6.53□□□□□ -1.36
GABPB1-207ENST00000558335 PIK3C2AO00443 1686 aa6.53□□□□□ -1.36
GABPB1-207ENST00000558335 FAM83GA6ND36 823 aa6.53□□□□□ -1.36
GABPB1-207ENST00000558335 HAX1O00165 279 aa6.53□□□□□ -1.36
GABPB1-207ENST00000558335 PRPF40AO75400 957 aaKnown RBP6.53□□□□□ -1.36
GABPB1-207ENST00000558335 BRD1O95696 1058 aa6.53□□□□□ -1.36
GABPB1-207ENST00000558335 CHMLP26374 656 aa6.53□□□□□ -1.36
GABPB1-207ENST00000558335 KCNJ4P48050 445 aa6.53□□□□□ -1.36
GABPB1-207ENST00000558335 DHX8Q14562 1220 aaKnown RBP6.53□□□□□ -1.36
GABPB1-207ENST00000558335 MTHFSDQ2M296 383 aaKnown RBP6.53□□□□□ -1.36
GABPB1-207ENST00000558335 CAVIN1Q6NZI2 390 aaKnown RBP6.53□□□□□ -1.36
GABPB1-207ENST00000558335 MCM10Q7L590 875 aa6.53□□□□□ -1.36
GABPB1-207ENST00000558335 CLASRPQ8N2M8 674 aaKnown RBP6.53□□□□□ -1.36
GABPB1-207ENST00000558335 SPDYE1Q8NFV5 336 aaPredicted RBP6.53□□□□□ -1.36
GABPB1-207ENST00000558335 TMX3Q96JJ7 454 aa6.53□□□□□ -1.36
GABPB1-207ENST00000558335 SLC26A8Q96RN1 970 aa6.53□□□□□ -1.36
GABPB1-207ENST00000558335 ANO2Q9NQ90 1003 aa6.53□□□□□ -1.36
GABPB1-207ENST00000558335 CGNQ9P2M7 1197 aaKnown RBP6.53□□□□□ -1.36
GABPB1-207ENST00000558335 SALL3Q9BXA9 1300 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 LMO7Q8WWI1 1683 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms