RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 USP16Q9Y5T5 823 aa14.32□□□□□ -0.12
SHF-203ENST00000558294 PRAMEF22A3QJZ6 481 aa14.31□□□□□ -0.12
SHF-203ENST00000558294 SRGNP10124 158 aa14.31□□□□□ -0.12
SHF-203ENST00000558294 ST5P78524 1137 aa14.31□□□□□ -0.12
SHF-203ENST00000558294 STYK1Q6J9G0 422 aa14.31□□□□□ -0.12
SHF-203ENST00000558294 CFAP53Q96M91 514 aa14.31□□□□□ -0.12
SHF-203ENST00000558294 TAOK3Q9H2K8 898 aa14.31□□□□□ -0.12
SHF-203ENST00000558294 PCNTO95613 3336 aa14.3□□□□□ -0.12
SHF-203ENST00000558294 PIP4K2AP48426 406 aaPredicted RBP14.3□□□□□ -0.12
SHF-203ENST00000558294 PRPF40BQ6NWY9 871 aaKnown RBP14.3□□□□□ -0.12
SHF-203ENST00000558294 NPHP1O15259 732 aa14.29□□□□□ -0.12
SHF-203ENST00000558294 CLEC4GQ6UXB4 293 aa14.29□□□□□ -0.12
SHF-203ENST00000558294 MCM10Q7L590 875 aa14.29□□□□□ -0.12
SHF-203ENST00000558294 MASTLQ96GX5 879 aa14.29□□□□□ -0.12
SHF-203ENST00000558294 SNRPA1P09661 255 aaKnown RBP14.28□□□□□ -0.12
SHF-203ENST00000558294 SOGA3Q5TF21 947 aa14.28□□□□□ -0.12
SHF-203ENST00000558294 NUDCQ9Y266 331 aa14.28□□□□□ -0.12
SHF-203ENST00000558294 NBPF26B4DH59 902 aa14.27□□□□□ -0.13
SHF-203ENST00000558294 DDNO94850 711 aaPredicted RBP14.27□□□□□ -0.13
SHF-203ENST00000558294 U2AF1L5P0DN76 240 aaPredicted RBP14.27□□□□□ -0.13
SHF-203ENST00000558294 U2AF1Q01081 240 aaKnown RBP eCLIP14.27□□□□□ -0.13
SHF-203ENST00000558294 NBPF10Q6P3W6 841 aaKnown RBP14.27□□□□□ -0.13
SHF-203ENST00000558294 NBPF5PQ86XG9 351 aaPredicted RBP14.27□□□□□ -0.13
SHF-203ENST00000558294 NBPF15Q8N660 670 aa14.27□□□□□ -0.13
SHF-203ENST00000558294 C7orf43Q8WVR3 580 aa14.27□□□□□ -0.13
SHF-203ENST00000558294 RTF1Q92541 710 aaKnown RBP14.27□□□□□ -0.13
SHF-203ENST00000558294 ZNF652Q9Y2D9 606 aa14.27□□□□□ -0.13
SHF-203ENST00000558294 KLRG2A4D1S0 409 aaPredicted RBP14.26□□□□□ -0.13
SHF-203ENST00000558294 RGL2O15211 777 aa14.26□□□□□ -0.13
SHF-203ENST00000558294 POTEIP0CG38 1075 aa14.26□□□□□ -0.13
SHF-203ENST00000558294 POTEJP0CG39 1038 aa14.26□□□□□ -0.13
SHF-203ENST00000558294 PPP2R1AP30153 589 aa14.26□□□□□ -0.13
SHF-203ENST00000558294 DCTN1Q14203 1278 aa14.26□□□□□ -0.13
SHF-203ENST00000558294 CHADLQ6NUI6 762 aa14.26□□□□□ -0.13
SHF-203ENST00000558294 LAMB4A4D0S4 1761 aa14.25□□□□□ -0.13
SHF-203ENST00000558294 HTATSF1O43719 755 aaKnown RBP14.25□□□□□ -0.13
SHF-203ENST00000558294 HSPA1AP0DMV8 641 aaKnown RBP14.25□□□□□ -0.13
SHF-203ENST00000558294 HSPA1BP0DMV9 641 aaKnown RBP14.25□□□□□ -0.13
SHF-203ENST00000558294 NPR1P16066 1061 aa14.25□□□□□ -0.13
SHF-203ENST00000558294 CCDC93Q567U6 631 aa14.24□□□□□ -0.13
SHF-203ENST00000558294 TNS4Q8IZW8 715 aa14.24□□□□□ -0.13
SHF-203ENST00000558294 NIP7Q9Y221 180 aaKnown RBP eCLIP14.24□□□□□ -0.13
SHF-203ENST00000558294 SCN4AP35499 1836 aa14.24□□□□□ -0.13
SHF-203ENST00000558294 TPTE2Q6XPS3 522 aa14.23□□□□□ -0.13
SHF-203ENST00000558294 L3MBTL3Q96JM7 780 aaPredicted RBP14.23□□□□□ -0.13
SHF-203ENST00000558294 CREBZFQ9NS37 354 aa14.23□□□□□ -0.13
SHF-203ENST00000558294 IQCA1LA6NCM1 817 aa14.22□□□□□ -0.13
SHF-203ENST00000558294 FKBP4Q02790 459 aaKnown RBP eCLIP14.22□□□□□ -0.13
SHF-203ENST00000558294 TAF7Q15545 349 aaPredicted RBP14.22□□□□□ -0.13
SHF-203ENST00000558294 HLFQ16534 295 aa14.22□□□□□ -0.13
SHF-203ENST00000558294 KDM3BQ7LBC6 1761 aa14.22□□□□□ -0.13
SHF-203ENST00000558294 FAM177BA6PVY3 158 aa14.21□□□□□ -0.13
SHF-203ENST00000558294 OLFM4Q6UX06 510 aa14.21□□□□□ -0.13
SHF-203ENST00000558294 TAF1DQ9H5J8 278 aaPredicted RBP14.21□□□□□ -0.13
SHF-203ENST00000558294 ZNF277Q9NRM2 450 aaPredicted RBP14.21□□□□□ -0.13
SHF-203ENST00000558294 MIS18AQ9NYP9 233 aa14.21□□□□□ -0.13
SHF-203ENST00000558294 DLG5Q8TDM6 1919 aa14.21□□□□□ -0.14
SHF-203ENST00000558294 PASKQ96RG2 1323 aa14.2□□□□□ -0.14
SHF-203ENST00000558294 ZNF541Q9H0D2 1346 aa14.2□□□□□ -0.14
SHF-203ENST00000558294 ADAMTSL1Q8N6G6 1762 aa14.2□□□□□ -0.14
SHF-203ENST00000558294 CAPN15O75808 1086 aa14.2□□□□□ -0.14
SHF-203ENST00000558294 LDHDQ86WU2 507 aa14.2□□□□□ -0.14
SHF-203ENST00000558294 RTKN2Q8IZC4 609 aa14.2□□□□□ -0.14
SHF-203ENST00000558294 MKRN1Q9UHC7 482 aaKnown RBP14.2□□□□□ -0.14
SHF-203ENST00000558294 SNED1Q8TER0 1413 aa14.2□□□□□ -0.14
SHF-203ENST00000558294 ALDH1B1P30837 517 aa14.19□□□□□ -0.14
SHF-203ENST00000558294 NUP98P52948 1817 aa14.19□□□□□ -0.14
SHF-203ENST00000558294 ABCC12Q96J65 1359 aa14.19□□□□□ -0.14
SHF-203ENST00000558294 ERVV-1B6SEH8 477 aa14.18□□□□□ -0.14
SHF-203ENST00000558294 IARSP41252 1262 aaKnown RBP14.18□□□□□ -0.14
SHF-203ENST00000558294 CRY2Q49AN0 593 aa14.18□□□□□ -0.14
SHF-203ENST00000558294 CNTNAP1P78357 1384 aa14.18□□□□□ -0.14
SHF-203ENST00000558294 FZD9O00144 591 aa14.17□□□□□ -0.14
SHF-203ENST00000558294 ITGBL1O95965 494 aaPredicted RBP14.17□□□□□ -0.14
SHF-203ENST00000558294 GTF2E1P29083 439 aaPredicted RBP14.17□□□□□ -0.14
SHF-203ENST00000558294 NUTM1Q86Y26 1132 aa14.17□□□□□ -0.14
SHF-203ENST00000558294 SYNE4Q8N205 404 aa14.17□□□□□ -0.14
SHF-203ENST00000558294 PNISRQ8TF01 805 aaKnown RBP14.17□□□□□ -0.14
SHF-203ENST00000558294 NYXQ9GZU5 481 aa14.17□□□□□ -0.14
SHF-203ENST00000558294 HACL1Q9UJ83 578 aa14.17□□□□□ -0.14
SHF-203ENST00000558294 MAP3K15Q6ZN16 1313 aa14.16□□□□□ -0.14
SHF-203ENST00000558294 RIC1Q4ADV7 1423 aa14.16□□□□□ -0.14
SHF-203ENST00000558294 EIF4A1P60842 406 aaKnown RBP14.16□□□□□ -0.14
SHF-203ENST00000558294 EAPPQ56P03 285 aaPredicted RBP14.16□□□□□ -0.14
SHF-203ENST00000558294 TTLL7Q6ZT98 887 aa14.16□□□□□ -0.14
SHF-203ENST00000558294 NGEFQ8N5V2 710 aa14.16□□□□□ -0.14
SHF-203ENST00000558294 PLEKHF1Q96S99 279 aa14.16□□□□□ -0.14
SHF-203ENST00000558294 PSMD1Q99460 953 aa14.16□□□□□ -0.14
SHF-203ENST00000558294 UBN2Q6ZU65 1347 aa14.15□□□□□ -0.14
SHF-203ENST00000558294 COL4A5P29400 1685 aa14.15□□□□□ -0.14
SHF-203ENST00000558294 IBTKQ9P2D0 1353 aaPredicted RBP14.15□□□□□ -0.14
SHF-203ENST00000558294 NEFMP07197 916 aa14.15□□□□□ -0.14
SHF-203ENST00000558294 HOXA10P31260 410 aaPredicted RBP14.15□□□□□ -0.14
SHF-203ENST00000558294 EPHX2P34913 555 aa14.15□□□□□ -0.14
SHF-203ENST00000558294 KIF6Q6ZMV9 814 aa14.15□□□□□ -0.14
SHF-203ENST00000558294 RRP7AQ9Y3A4 280 aaKnown RBP14.15□□□□□ -0.14
SHF-203ENST00000558294 RNF123Q5XPI4 1314 aa14.15□□□□□ -0.15
SHF-203ENST00000558294 TMEM88BA6NKF7 163 aa14.14□□□□□ -0.15
SHF-203ENST00000558294 NFE2L2Q16236 605 aa14.14□□□□□ -0.15
SHF-203ENST00000558294 CC2D2BQ6DHV5 1058 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms