RNA–Protein interactions for RNA: ENST00000558217.5

SEC11A-205, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 2

Gene SEC11A, Length 882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-205ENST00000558217 PRAMEF22A3QJZ6 481 aa17.37■□□□□ 0.37
SEC11A-205ENST00000558217 CAMTA2O94983 1202 aa17.37■□□□□ 0.37
SEC11A-205ENST00000558217 TBC1D9BQ66K14 1250 aa17.37■□□□□ 0.37
SEC11A-205ENST00000558217 BICDL1Q6ZP65 573 aa17.37■□□□□ 0.37
SEC11A-205ENST00000558217 MYBBP1AQ9BQG0 1328 aaKnown RBP17.37■□□□□ 0.37
SEC11A-205ENST00000558217 DZIP3Q86Y13 1208 aaKnown RBP17.36■□□□□ 0.37
SEC11A-205ENST00000558217 PDZRN3Q9UPQ7 1066 aa17.36■□□□□ 0.37
SEC11A-205ENST00000558217 RGL2O15211 777 aa17.34■□□□□ 0.37
SEC11A-205ENST00000558217 CLEC4GQ6UXB4 293 aa17.34■□□□□ 0.37
SEC11A-205ENST00000558217 ZNF526Q8TF50 670 aaPredicted RBP17.34■□□□□ 0.37
SEC11A-205ENST00000558217 SETDB2Q96T68 719 aa17.34■□□□□ 0.37
SEC11A-205ENST00000558217 MIS18AQ9NYP9 233 aa17.34■□□□□ 0.37
SEC11A-205ENST00000558217 COL11A2P13942 1736 aaPredicted RBP17.33■□□□□ 0.37
SEC11A-205ENST00000558217 H0YIN7 160 aa17.33■□□□□ 0.36
SEC11A-205ENST00000558217 PIP4K2AP48426 406 aaPredicted RBP17.33■□□□□ 0.36
SEC11A-205ENST00000558217 C2CD5Q86YS7 1000 aa17.33■□□□□ 0.36
SEC11A-205ENST00000558217 BRIP1Q9BX63 1249 aa17.33■□□□□ 0.36
SEC11A-205ENST00000558217 ZNF652Q9Y2D9 606 aa17.33■□□□□ 0.36
SEC11A-205ENST00000558217 NBPF26B4DH59 902 aa17.32■□□□□ 0.36
SEC11A-205ENST00000558217 PDE6BP35913 854 aa17.32■□□□□ 0.36
SEC11A-205ENST00000558217 PRR5LQ6MZQ0 368 aa17.32■□□□□ 0.36
SEC11A-205ENST00000558217 NBPF10Q6P3W6 841 aaKnown RBP17.32■□□□□ 0.36
SEC11A-205ENST00000558217 NBPF15Q8N660 670 aa17.32■□□□□ 0.36
SEC11A-205ENST00000558217 TTLL6Q8N841 843 aa17.32■□□□□ 0.36
SEC11A-205ENST00000558217 ARFGEF2Q9Y6D5 1785 aa17.31■□□□□ 0.36
SEC11A-205ENST00000558217 EIF4A1P60842 406 aaKnown RBP17.31■□□□□ 0.36
SEC11A-205ENST00000558217 C9orf131Q5VYM1 1079 aa17.31■□□□□ 0.36
SEC11A-205ENST00000558217 CNBD1Q8NA66 436 aa17.31■□□□□ 0.36
SEC11A-205ENST00000558217 THUMPD2Q9BTF0 503 aaKnown RBP17.31■□□□□ 0.36
SEC11A-205ENST00000558217 CCDC88AQ3V6T2 1871 aa17.31■□□□□ 0.36
SEC11A-205ENST00000558217 NUP98P52948 1817 aa17.31■□□□□ 0.36
SEC11A-205ENST00000558217 SENP3-EIF4A1A0A087X0R7 540 aa17.3■□□□□ 0.36
SEC11A-205ENST00000558217 RIPK4P57078 832 aa17.3■□□□□ 0.36
SEC11A-205ENST00000558217 ST5P78524 1137 aa17.3■□□□□ 0.36
SEC11A-205ENST00000558217 LMOD3Q0VAK6 560 aa17.3■□□□□ 0.36
SEC11A-205ENST00000558217 CACNA1SQ13698 1873 aa17.3■□□□□ 0.36
SEC11A-205ENST00000558217 NPHP1O15259 732 aa17.29■□□□□ 0.36
SEC11A-205ENST00000558217 PRR29P0C7W0 189 aa17.29■□□□□ 0.36
SEC11A-205ENST00000558217 BABAM1Q9NWV8 329 aa17.29■□□□□ 0.36
SEC11A-205ENST00000558217 TMPOP42166 694 aaKnown RBP17.28■□□□□ 0.36
SEC11A-205ENST00000558217 FER1L6Q2WGJ9 1857 aa17.27■□□□□ 0.36
SEC11A-205ENST00000558217 KIF3CO14782 793 aa17.27■□□□□ 0.36
SEC11A-205ENST00000558217 FXR2P51116 673 aaKnown RBP eCLIP17.27■□□□□ 0.36
SEC11A-205ENST00000558217 WDR43Q15061 677 aaKnown RBP eCLIP17.27■□□□□ 0.36
SEC11A-205ENST00000558217 NBPF5PQ86XG9 351 aaPredicted RBP17.27■□□□□ 0.36
SEC11A-205ENST00000558217 RNF181Q9P0P0 153 aa17.27■□□□□ 0.36
SEC11A-205ENST00000558217 TSPYL4Q9UJ04 414 aa17.27■□□□□ 0.36
SEC11A-205ENST00000558217 TNRC6CQ9HCJ0 1690 aaKnown RBP17.26■□□□□ 0.35
SEC11A-205ENST00000558217 ERBB4Q15303 1308 aa17.26■□□□□ 0.35
SEC11A-205ENST00000558217 ZC3H4Q9UPT8 1303 aaKnown RBP17.26■□□□□ 0.35
SEC11A-205ENST00000558217 DICER1Q9UPY3 1922 aaKnown RBP17.26■□□□□ 0.35
SEC11A-205ENST00000558217 PIP4P2Q8N4L2 257 aa17.26■□□□□ 0.35
SEC11A-205ENST00000558217 ZNF622Q969S3 477 aaKnown RBP eCLIP17.26■□□□□ 0.35
SEC11A-205ENST00000558217 RUNDC1Q96C34 613 aa17.26■□□□□ 0.35
SEC11A-205ENST00000558217 PRKRIP1Q9H875 184 aaPredicted RBP17.26■□□□□ 0.35
SEC11A-205ENST00000558217 TIAM2Q8IVF5 1701 aa17.26■□□□□ 0.35
SEC11A-205ENST00000558217 ERVV-1B6SEH8 477 aa17.25■□□□□ 0.35
SEC11A-205ENST00000558217 STYK1Q6J9G0 422 aa17.25■□□□□ 0.35
SEC11A-205ENST00000558217 TPTE2Q6XPS3 522 aa17.25■□□□□ 0.35
SEC11A-205ENST00000558217 CCDC24Q8N4L8 307 aa17.25■□□□□ 0.35
SEC11A-205ENST00000558217 NIP7Q9Y221 180 aaKnown RBP eCLIP17.25■□□□□ 0.35
SEC11A-205ENST00000558217 SLX4Q8IY92 1834 aa17.25■□□□□ 0.35
SEC11A-205ENST00000558217 SRGNP10124 158 aa17.24■□□□□ 0.35
SEC11A-205ENST00000558217 LMNB1P20700 586 aa17.24■□□□□ 0.35
SEC11A-205ENST00000558217 CNKSR1Q969H4 720 aa17.24■□□□□ 0.35
SEC11A-205ENST00000558217 MASTLQ96GX5 879 aa17.24■□□□□ 0.35
SEC11A-205ENST00000558217 MAP3K15Q6ZN16 1313 aa17.23■□□□□ 0.35
SEC11A-205ENST00000558217 KDM2BQ8NHM5 1336 aa17.23■□□□□ 0.35
SEC11A-205ENST00000558217 RASSF7Q02833 373 aa17.23■□□□□ 0.35
SEC11A-205ENST00000558217 HLFQ16534 295 aa17.23■□□□□ 0.35
SEC11A-205ENST00000558217 KIF6Q6ZMV9 814 aa17.23■□□□□ 0.35
SEC11A-205ENST00000558217 CCDC146Q8IYE0 955 aa17.23■□□□□ 0.35
SEC11A-205ENST00000558217 RRP7AQ9Y3A4 280 aaKnown RBP17.23■□□□□ 0.35
SEC11A-205ENST00000558217 MYL6BP14649 208 aa17.22■□□□□ 0.35
SEC11A-205ENST00000558217 ADAMTS8Q9UP79 889 aa17.22■□□□□ 0.35
SEC11A-205ENST00000558217 KLRG2A4D1S0 409 aaPredicted RBP17.21■□□□□ 0.35
SEC11A-205ENST00000558217 NFKBIEO00221 500 aa17.21■□□□□ 0.35
SEC11A-205ENST00000558217 C21orf2O43822 256 aa17.21■□□□□ 0.35
SEC11A-205ENST00000558217 TOMM70O94826 608 aa17.21■□□□□ 0.35
SEC11A-205ENST00000558217 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
SEC11A-205ENST00000558217 NEUROD2Q15784 382 aa17.21■□□□□ 0.35
SEC11A-205ENST00000558217 SOGA3Q5TF21 947 aa17.21■□□□□ 0.35
SEC11A-205ENST00000558217 NGEFQ8N5V2 710 aa17.21■□□□□ 0.35
SEC11A-205ENST00000558217 NMRK2Q9NPI5 230 aa17.21■□□□□ 0.35
SEC11A-205ENST00000558217 IBTKQ9P2D0 1353 aaPredicted RBP17.2■□□□□ 0.34
SEC11A-205ENST00000558217 HSPA6P17066 643 aa17.2■□□□□ 0.34
SEC11A-205ENST00000558217 TTLL7Q6ZT98 887 aa17.2■□□□□ 0.34
SEC11A-205ENST00000558217 NYXQ9GZU5 481 aa17.2■□□□□ 0.34
SEC11A-205ENST00000558217 TRIM35Q9UPQ4 493 aa17.2■□□□□ 0.34
SEC11A-205ENST00000558217 ANKRD36CQ5JPF3 1778 aa17.2■□□□□ 0.34
SEC11A-205ENST00000558217 LTBP3Q9NS15 1303 aa17.2■□□□□ 0.34
SEC11A-205ENST00000558217 CHL1O00533 1208 aa17.19■□□□□ 0.34
SEC11A-205ENST00000558217 NPR1P16066 1061 aa17.19■□□□□ 0.34
SEC11A-205ENST00000558217 GTF2E1P29083 439 aaPredicted RBP17.19■□□□□ 0.34
SEC11A-205ENST00000558217 PRELPP51888 382 aa17.19■□□□□ 0.34
SEC11A-205ENST00000558217 PRPF40BQ6NWY9 871 aaKnown RBP17.19■□□□□ 0.34
SEC11A-205ENST00000558217 FAM177BA6PVY3 158 aa17.18■□□□□ 0.34
SEC11A-205ENST00000558217 PDIA6Q15084 440 aa17.18■□□□□ 0.34
SEC11A-205ENST00000558217 GIGYF2Q6Y7W6 1299 aaKnown RBP17.18■□□□□ 0.34
SEC11A-205ENST00000558217 RIC1Q4ADV7 1423 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms