RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 SHANK3Q9BYB0 1731 aa15.87■□□□□ 0.13
HMGB1P8-201ENST00000558211 PPP1R3GB7ZBB8 358 aa15.86■□□□□ 0.13
HMGB1P8-201ENST00000558211 GPR37O15354 613 aa15.86■□□□□ 0.13
HMGB1P8-201ENST00000558211 NEUROD2Q15784 382 aa15.86■□□□□ 0.13
HMGB1P8-201ENST00000558211 GAS2L2Q8NHY3 880 aa15.86■□□□□ 0.13
HMGB1P8-201ENST00000558211 PHKG2P15735 406 aa15.85■□□□□ 0.13
HMGB1P8-201ENST00000558211 RRP7AQ9Y3A4 280 aaKnown RBP15.85■□□□□ 0.13
HMGB1P8-201ENST00000558211 PTGDRQ13258 359 aa15.84■□□□□ 0.13
HMGB1P8-201ENST00000558211 DMRTA1Q5VZB9 504 aa15.84■□□□□ 0.13
HMGB1P8-201ENST00000558211 ACSBG1Q96GR2 724 aa15.84■□□□□ 0.13
HMGB1P8-201ENST00000558211 AKAP4Q5JQC9 854 aa15.83■□□□□ 0.12
HMGB1P8-201ENST00000558211 MPRIPQ6WCQ1 1025 aa15.83■□□□□ 0.12
HMGB1P8-201ENST00000558211 APAF1O14727 1248 aa15.82■□□□□ 0.12
HMGB1P8-201ENST00000558211 NFE2L2Q16236 605 aa15.82■□□□□ 0.12
HMGB1P8-201ENST00000558211 FAM196AQ6ZSG2 479 aa15.82■□□□□ 0.12
HMGB1P8-201ENST00000558211 GPIHBP1Q8IV16 184 aa15.82■□□□□ 0.12
HMGB1P8-201ENST00000558211 GNAT3A8MTJ3 354 aa15.81■□□□□ 0.12
HMGB1P8-201ENST00000558211 HSP90AB1P08238 724 aaKnown RBP15.81■□□□□ 0.12
HMGB1P8-201ENST00000558211 TMPOP42166 694 aaKnown RBP15.81■□□□□ 0.12
HMGB1P8-201ENST00000558211 RIPK4P57078 832 aa15.81■□□□□ 0.12
HMGB1P8-201ENST00000558211 DLG5Q8TDM6 1919 aa15.81■□□□□ 0.12
HMGB1P8-201ENST00000558211 SYTL4Q96C24 671 aaPredicted RBP15.81■□□□□ 0.12
HMGB1P8-201ENST00000558211 PLEKHG2Q9H7P9 1386 aa15.81■□□□□ 0.12
HMGB1P8-201ENST00000558211 SALL2Q9Y467 1007 aaPredicted RBP15.81■□□□□ 0.12
HMGB1P8-201ENST00000558211 MAP3K5Q99683 1374 aa15.8■□□□□ 0.12
HMGB1P8-201ENST00000558211 DCTN1Q14203 1278 aa15.8■□□□□ 0.12
HMGB1P8-201ENST00000558211 RTF1Q92541 710 aaKnown RBP15.8■□□□□ 0.12
HMGB1P8-201ENST00000558211 ZBED2Q9BTP6 218 aa15.8■□□□□ 0.12
HMGB1P8-201ENST00000558211 SLC4A5Q9BY07 1137 aa15.8■□□□□ 0.12
HMGB1P8-201ENST00000558211 LGR6Q9HBX8 967 aa15.8■□□□□ 0.12
HMGB1P8-201ENST00000558211 TRIM37O94972 964 aa15.79■□□□□ 0.12
HMGB1P8-201ENST00000558211 LSM11P83369 360 aaKnown RBP eCLIP15.79■□□□□ 0.12
HMGB1P8-201ENST00000558211 DCAF5Q96JK2 942 aa15.79■□□□□ 0.12
HMGB1P8-201ENST00000558211 VIRMAQ69YN4 1812 aaKnown RBP15.79■□□□□ 0.12
HMGB1P8-201ENST00000558211 DOT1LQ8TEK3 1739 aa15.78■□□□□ 0.12
HMGB1P8-201ENST00000558211 RNMTO43148 476 aaKnown RBP15.78■□□□□ 0.12
HMGB1P8-201ENST00000558211 KCNQ2O43526 872 aa15.78■□□□□ 0.12
HMGB1P8-201ENST00000558211 MCM10Q7L590 875 aa15.78■□□□□ 0.12
HMGB1P8-201ENST00000558211 PTF1AQ7RTS3 328 aa15.77■□□□□ 0.12
HMGB1P8-201ENST00000558211 IL17REQ8NFR9 667 aa15.77■□□□□ 0.12
HMGB1P8-201ENST00000558211 PCDH10Q9P2E7 1040 aa15.77■□□□□ 0.12
HMGB1P8-201ENST00000558211 SBF2Q86WG5 1849 aa15.77■□□□□ 0.11
HMGB1P8-201ENST00000558211 KDM6AO15550 1401 aaPredicted RBP15.77■□□□□ 0.11
HMGB1P8-201ENST00000558211 CABP4P57796 275 aa15.76■□□□□ 0.11
HMGB1P8-201ENST00000558211 THUMPD2Q9BTF0 503 aaKnown RBP15.76■□□□□ 0.11
HMGB1P8-201ENST00000558211 SCN11AQ9UI33 1791 aa15.76■□□□□ 0.11
HMGB1P8-201ENST00000558211 ITGB4P16144 1822 aa15.75■□□□□ 0.11
HMGB1P8-201ENST00000558211 TOGARAM1Q9Y4F4 1720 aa15.75■□□□□ 0.11
HMGB1P8-201ENST00000558211 TMOD3Q9NYL9 352 aa15.75■□□□□ 0.11
HMGB1P8-201ENST00000558211 RBM27Q9P2N5 1060 aaKnown RBP15.75■□□□□ 0.11
HMGB1P8-201ENST00000558211 ERVV-2B6SEH9 535 aa15.74■□□□□ 0.11
HMGB1P8-201ENST00000558211 TK2O00142 265 aa15.74■□□□□ 0.11
HMGB1P8-201ENST00000558211 HTATSF1O43719 755 aaKnown RBP15.74■□□□□ 0.11
HMGB1P8-201ENST00000558211 PRSS12P56730 875 aa15.74■□□□□ 0.11
HMGB1P8-201ENST00000558211 LMOD3Q0VAK6 560 aa15.74■□□□□ 0.11
HMGB1P8-201ENST00000558211 TEFQ10587 303 aa15.74■□□□□ 0.11
HMGB1P8-201ENST00000558211 HIC1Q14526 733 aa15.74■□□□□ 0.11
HMGB1P8-201ENST00000558211 TTC13Q8NBP0 860 aa15.74■□□□□ 0.11
HMGB1P8-201ENST00000558211 NFATC2IPQ8NCF5 419 aa15.74■□□□□ 0.11
HMGB1P8-201ENST00000558211 ZC3H15Q8WU90 426 aaKnown RBP15.73■□□□□ 0.11
HMGB1P8-201ENST00000558211 PIGBQ92521 554 aa15.73■□□□□ 0.11
HMGB1P8-201ENST00000558211 CDCA7LQ96GN5 454 aa15.73■□□□□ 0.11
HMGB1P8-201ENST00000558211 VPS9D1Q9Y2B5 631 aa15.73■□□□□ 0.11
HMGB1P8-201ENST00000558211 BCL9O00512 1426 aa15.73■□□□□ 0.11
HMGB1P8-201ENST00000558211 APBA3O96018 575 aa15.72■□□□□ 0.11
HMGB1P8-201ENST00000558211 SF3B2Q13435 895 aaKnown RBP15.72■□□□□ 0.11
HMGB1P8-201ENST00000558211 PROX2Q3B8N5 592 aa15.72■□□□□ 0.11
HMGB1P8-201ENST00000558211 SLC52A2Q9HAB3 445 aa15.72■□□□□ 0.11
HMGB1P8-201ENST00000558211 NHSQ6T4R5 1651 aa15.71■□□□□ 0.11
HMGB1P8-201ENST00000558211 LAS1LQ9Y4W2 734 aaKnown RBP15.71■□□□□ 0.11
HMGB1P8-201ENST00000558211 TRIM6-TRIM34B2RNG4 842 aa15.7■□□□□ 0.1
HMGB1P8-201ENST00000558211 GNPATO15228 680 aa15.7■□□□□ 0.1
HMGB1P8-201ENST00000558211 HNRNPUQ00839 825 aaKnown RBP eCLIP15.7■□□□□ 0.1
HMGB1P8-201ENST00000558211 FAM198AQ9UFP1 575 aa15.7■□□□□ 0.1
HMGB1P8-201ENST00000558211 TSKSQ9UJT2 592 aa15.7■□□□□ 0.1
HMGB1P8-201ENST00000558211 BTAF1O14981 1849 aa15.7■□□□□ 0.1
HMGB1P8-201ENST00000558211 SLC39A6Q13433 755 aa15.69■□□□□ 0.1
HMGB1P8-201ENST00000558211 ADGRD1Q6QNK2 874 aa15.69■□□□□ 0.1
HMGB1P8-201ENST00000558211 MIS18AQ9NYP9 233 aa15.69■□□□□ 0.1
HMGB1P8-201ENST00000558211 ASAP1Q9ULH1 1129 aa15.69■□□□□ 0.1
HMGB1P8-201ENST00000558211 CEMIPQ8WUJ3 1361 aa15.69■□□□□ 0.1
HMGB1P8-201ENST00000558211 ADAMTS7Q9UKP4 1686 aa15.69■□□□□ 0.1
HMGB1P8-201ENST00000558211 BTBD11A6QL63 1104 aa15.68■□□□□ 0.1
HMGB1P8-201ENST00000558211 TAF7Q15545 349 aaPredicted RBP15.68■□□□□ 0.1
HMGB1P8-201ENST00000558211 PADI6Q6TGC4 694 aa15.68■□□□□ 0.1
HMGB1P8-201ENST00000558211 WWC1Q8IX03 1113 aa15.68■□□□□ 0.1
HMGB1P8-201ENST00000558211 EP400Q96L91 3159 aa15.68■□□□□ 0.1
HMGB1P8-201ENST00000558211 ZMYND10O75800 440 aa15.67■□□□□ 0.1
HMGB1P8-201ENST00000558211 FECHP22830 423 aa15.67■□□□□ 0.1
HMGB1P8-201ENST00000558211 ANKRD13DQ6ZTN6 518 aa15.67■□□□□ 0.1
HMGB1P8-201ENST00000558211 DEFB132Q7Z7B7 95 aa15.67■□□□□ 0.1
HMGB1P8-201ENST00000558211 ATG3Q9NT62 314 aa15.67■□□□□ 0.1
HMGB1P8-201ENST00000558211 TNS1Q9HBL0 1735 aaKnown RBP15.66■□□□□ 0.1
HMGB1P8-201ENST00000558211 HRO43593 1189 aa15.66■□□□□ 0.1
HMGB1P8-201ENST00000558211 CCDC27Q2M243 656 aa15.66■□□□□ 0.1
HMGB1P8-201ENST00000558211 CCDC125Q86Z20 511 aa15.66■□□□□ 0.1
HMGB1P8-201ENST00000558211 MRC1P22897 1456 aa15.65■□□□□ 0.1
HMGB1P8-201ENST00000558211 SIPA1L3O60292 1781 aaPredicted RBP15.65■□□□□ 0.1
HMGB1P8-201ENST00000558211 KCNQ3O43525 872 aa15.65■□□□□ 0.1
HMGB1P8-201ENST00000558211 PTCD1O75127 700 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms