RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 ERCC6Q03468 1493 aa12.92□□□□□ -0.34
SEMA4B-204ENST00000558065 CHCHD3Q9NX63 227 aaKnown RBP12.92□□□□□ -0.34
SEMA4B-204ENST00000558065 CFTRP13569 1480 aa12.92□□□□□ -0.34
SEMA4B-204ENST00000558065 GADD45BO75293 160 aaPredicted RBP12.92□□□□□ -0.34
SEMA4B-204ENST00000558065 RLBP1P12271 317 aa12.92□□□□□ -0.34
SEMA4B-204ENST00000558065 CASTP20810 708 aaKnown RBP12.92□□□□□ -0.34
SEMA4B-204ENST00000558065 ATL2Q8NHH9 583 aa12.92□□□□□ -0.34
SEMA4B-204ENST00000558065 OATP04181 439 aa12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 PECAM1P16284 738 aaPredicted RBP12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 DDR1Q08345 913 aa12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 ZRSR2Q15696 482 aaKnown RBP12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 CCDC93Q567U6 631 aa12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 TMX3Q96JJ7 454 aa12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 MPHOSPH9Q99550 1183 aa12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 RMI1Q9H9A7 625 aa12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 CCP110O43303 1012 aa12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 MYBPC2Q14324 1141 aa12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 USP26Q9BXU7 913 aa12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 GOPCQ9HD26 462 aa12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 NRBP1Q9UHY1 535 aa12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 ELP1O95163 1332 aa12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 PAX3P23760 479 aa12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 RAB27AP51159 221 aa12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 RBBP5Q15291 538 aaKnown RBP12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 RPUSD2Q8IZ73 545 aaKnown RBP12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 CCDC34Q96HJ3 373 aa12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 RANBP17Q9H2T7 1088 aaKnown RBP12.91□□□□□ -0.34
SEMA4B-204ENST00000558065 ANKRD30BQ9BXX2 1392 aa12.9□□□□□ -0.34
SEMA4B-204ENST00000558065 CCDC171Q6TFL3 1326 aa12.9□□□□□ -0.34
SEMA4B-204ENST00000558065 TPD52L2O43399 206 aaKnown RBP12.9□□□□□ -0.34
SEMA4B-204ENST00000558065 ORC3Q9UBD5 711 aaPredicted RBP12.9□□□□□ -0.34
SEMA4B-204ENST00000558065 CFAP74Q9C0B2 1584 aa12.9□□□□□ -0.34
SEMA4B-204ENST00000558065 PREPLQ4J6C6 727 aaPredicted RBP12.9□□□□□ -0.34
SEMA4B-204ENST00000558065 ZKSCAN4Q969J2 545 aaPredicted RBP12.9□□□□□ -0.34
SEMA4B-204ENST00000558065 KIF9Q9HAQ2 790 aa12.9□□□□□ -0.34
SEMA4B-204ENST00000558065 BIN2Q9UBW5 565 aaPredicted RBP12.9□□□□□ -0.34
SEMA4B-204ENST00000558065 EIF5P55010 431 aaKnown RBP12.9□□□□□ -0.35
SEMA4B-204ENST00000558065 PDIA5Q14554 519 aa12.9□□□□□ -0.35
SEMA4B-204ENST00000558065 C3orf20Q8ND61 904 aa12.9□□□□□ -0.35
SEMA4B-204ENST00000558065 PER1O15534 1290 aaPredicted RBP12.89□□□□□ -0.35
SEMA4B-204ENST00000558065 SMARCA5O60264 1052 aaPredicted RBP12.89□□□□□ -0.35
SEMA4B-204ENST00000558065 MFSD4BQ5TF39 518 aa12.89□□□□□ -0.35
SEMA4B-204ENST00000558065 TNNQ9UQP3 1299 aa12.89□□□□□ -0.35
SEMA4B-204ENST00000558065 ANKRD50Q9ULJ7 1429 aa12.89□□□□□ -0.35
SEMA4B-204ENST00000558065 IMPDH2P12268 514 aa12.89□□□□□ -0.35
SEMA4B-204ENST00000558065 ALDH1B1P30837 517 aa12.89□□□□□ -0.35
SEMA4B-204ENST00000558065 PTPN14Q15678 1187 aa12.89□□□□□ -0.35
SEMA4B-204ENST00000558065 KDM5DQ9BY66 1539 aa12.89□□□□□ -0.35
SEMA4B-204ENST00000558065 CCDC183Q5T5S1 534 aa12.89□□□□□ -0.35
SEMA4B-204ENST00000558065 CACTINQ8WUQ7 758 aaKnown RBP12.89□□□□□ -0.35
SEMA4B-204ENST00000558065 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
SEMA4B-204ENST00000558065 ARGLU1Q9NWB6 273 aaPredicted RBP12.89□□□□□ -0.35
SEMA4B-204ENST00000558065 CLIP2Q9UDT6 1046 aa12.89□□□□□ -0.35
SEMA4B-204ENST00000558065 FILIP1Q7Z7B0 1213 aa12.88□□□□□ -0.35
SEMA4B-204ENST00000558065 TBC1D5Q92609 795 aa12.88□□□□□ -0.35
SEMA4B-204ENST00000558065 FYCO1Q9BQS8 1478 aa12.88□□□□□ -0.35
SEMA4B-204ENST00000558065 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.88□□□□□ -0.35
SEMA4B-204ENST00000558065 PCF11O94913 1555 aaKnown RBP12.88□□□□□ -0.35
SEMA4B-204ENST00000558065 NF2P35240 595 aa12.88□□□□□ -0.35
SEMA4B-204ENST00000558065 CDCA2Q69YH5 1023 aaPredicted RBP12.88□□□□□ -0.35
SEMA4B-204ENST00000558065 CRACR2AQ9BSW2 395 aa12.88□□□□□ -0.35
SEMA4B-204ENST00000558065 PYGBP11216 843 aa12.87□□□□□ -0.35
SEMA4B-204ENST00000558065 LIG3P49916 1009 aa12.87□□□□□ -0.35
SEMA4B-204ENST00000558065 CC2D1AQ6P1N0 951 aaPredicted RBP12.87□□□□□ -0.35
SEMA4B-204ENST00000558065 ANKRD18AQ8IVF6 992 aa12.87□□□□□ -0.35
SEMA4B-204ENST00000558065 ZBTB10Q96DT7 871 aa12.87□□□□□ -0.35
SEMA4B-204ENST00000558065 PLEKHG4BQ96PX9 1271 aa12.87□□□□□ -0.35
SEMA4B-204ENST00000558065 YIPF2Q9BWQ6 316 aa12.87□□□□□ -0.35
SEMA4B-204ENST00000558065 SAMD9Q5K651 1589 aa12.87□□□□□ -0.35
SEMA4B-204ENST00000558065 LAMC3Q9Y6N6 1575 aa12.87□□□□□ -0.35
SEMA4B-204ENST00000558065 ZSCAN9O15535 394 aaPredicted RBP12.87□□□□□ -0.35
SEMA4B-204ENST00000558065 WLSQ5T9L3 541 aa12.87□□□□□ -0.35
SEMA4B-204ENST00000558065 HHATQ5VTY9 493 aa12.87□□□□□ -0.35
SEMA4B-204ENST00000558065 MYLK4Q86YV6 388 aaPredicted RBP12.87□□□□□ -0.35
SEMA4B-204ENST00000558065 SKAP2O75563 359 aaPredicted RBP12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 NUTM1Q86Y26 1132 aa12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 SDR16C5Q8N3Y7 309 aa12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 SENP3Q9H4L4 574 aaPredicted RBP12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 PLEKHA4Q9H4M7 779 aa12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 AKAP2Q9Y2D5 859 aa12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 CAMSAP2Q08AD1 1489 aa12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 HDGFL1Q5TGJ6 251 aa12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 WDR63Q8IWG1 891 aa12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 FUT8Q9BYC5 575 aa12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 ODF2LQ9ULJ1 636 aa12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 RBM47A0AV96 593 aaKnown RBP12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 SETSIPP0DME0 302 aa12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 GNAI1P63096 354 aa12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 FOXD4L5Q5VV16 416 aaPredicted RBP12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 RBM12BQ8IXT5 1001 aaKnown RBP12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 FOXD4L4Q8WXT5 416 aaPredicted RBP12.86□□□□□ -0.35
SEMA4B-204ENST00000558065 TMCO5BA8MYB1 307 aa12.85□□□□□ -0.35
SEMA4B-204ENST00000558065 CDKL5O76039 1030 aa12.85□□□□□ -0.35
SEMA4B-204ENST00000558065 GCKP35557 465 aa12.85□□□□□ -0.35
SEMA4B-204ENST00000558065 PRPHP41219 470 aa12.85□□□□□ -0.35
SEMA4B-204ENST00000558065 RASA3Q14644 834 aa12.85□□□□□ -0.35
SEMA4B-204ENST00000558065 CD248Q9HCU0 757 aa12.85□□□□□ -0.35
SEMA4B-204ENST00000558065 EXOC5O00471 708 aa12.85□□□□□ -0.35
SEMA4B-204ENST00000558065 BRD1O95696 1058 aa12.85□□□□□ -0.35
SEMA4B-204ENST00000558065 NAT1P18440 290 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms