RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 NEXNQ0ZGT2 675 aa21.31■■□□□ 1
SNX1-203ENST00000558040 TAF1LQ8IZX4 1826 aa21.31■■□□□ 1
SNX1-203ENST00000558040 EIF5P55010 431 aaKnown RBP21.3■■□□□ 1
SNX1-203ENST00000558040 SF3B2Q13435 895 aaKnown RBP21.3■■□□□ 1
SNX1-203ENST00000558040 TXNRD1Q16881 649 aa21.3■■□□□ 1
SNX1-203ENST00000558040 SRCIN1Q9C0H9 1055 aa21.3■■□□□ 1
SNX1-203ENST00000558040 PPP4R2Q9NY27 417 aa21.3■■□□□ 1
SNX1-203ENST00000558040 TTLL7Q6ZT98 887 aa21.29■■□□□ 1
SNX1-203ENST00000558040 METTL22Q9BUU2 404 aaPredicted RBP21.29■■□□□ 1
SNX1-203ENST00000558040 C4BP0C0L5 1744 aa21.29■■□□□ 1
SNX1-203ENST00000558040 ARFGEF2Q9Y6D5 1785 aa21.28■■□□□ 1
SNX1-203ENST00000558040 A0A087WZG4 1122 aa21.28■■□□□ 1
SNX1-203ENST00000558040 BEND3Q5T5X7 828 aa21.28■■□□□ 1
SNX1-203ENST00000558040 LRRC4BQ9NT99 713 aa21.28■■□□□ 1
SNX1-203ENST00000558040 MYH14Q7Z406 1995 aaKnown RBP21.28■■□□□ 1
SNX1-203ENST00000558040 MAP3K15Q6ZN16 1313 aa21.28■■□□□ 1
SNX1-203ENST00000558040 COL15A1P39059 1388 aa21.27■■□□□ 1
SNX1-203ENST00000558040 ALDH1L1O75891 902 aa21.27■■□□□ 1
SNX1-203ENST00000558040 DZIP3Q86Y13 1208 aaKnown RBP21.27■■□□□ 1
SNX1-203ENST00000558040 LINS1Q8NG48 757 aa21.27■■□□□ 1
SNX1-203ENST00000558040 AK7Q96M32 723 aa21.27■■□□□ 1
SNX1-203ENST00000558040 ARXQ96QS3 562 aa21.27■■□□□ 1
SNX1-203ENST00000558040 NUP188Q5SRE5 1749 aa21.26■□□□□ 0.99
SNX1-203ENST00000558040 ZBTB7BO15156 539 aaPredicted RBP21.26■□□□□ 0.99
SNX1-203ENST00000558040 GNPATO15228 680 aa21.26■□□□□ 0.99
SNX1-203ENST00000558040 RPS6KA4O75676 772 aa21.26■□□□□ 0.99
SNX1-203ENST00000558040 ZBTB3Q9H5J0 574 aa21.26■□□□□ 0.99
SNX1-203ENST00000558040 RTCBQ9Y3I0 505 aaKnown RBP21.26■□□□□ 0.99
SNX1-203ENST00000558040 IBTKQ9P2D0 1353 aaPredicted RBP21.25■□□□□ 0.99
SNX1-203ENST00000558040 ERVV-1B6SEH8 477 aa21.25■□□□□ 0.99
SNX1-203ENST00000558040 MYD88Q99836 296 aa21.25■□□□□ 0.99
SNX1-203ENST00000558040 HSP90AB3PQ58FF7 597 aa21.24■□□□□ 0.99
SNX1-203ENST00000558040 ZBTB40Q9NUA8 1239 aa21.24■□□□□ 0.99
SNX1-203ENST00000558040 GNAI3P08754 354 aa21.23■□□□□ 0.99
SNX1-203ENST00000558040 BAG6P46379 1132 aa21.23■□□□□ 0.99
SNX1-203ENST00000558040 CCDC125Q86Z20 511 aa21.23■□□□□ 0.99
SNX1-203ENST00000558040 PROM2Q8N271 834 aa21.23■□□□□ 0.99
SNX1-203ENST00000558040 GIGYF2Q6Y7W6 1299 aaKnown RBP21.22■□□□□ 0.99
SNX1-203ENST00000558040 CCDC136Q96JN2 1154 aa21.22■□□□□ 0.99
SNX1-203ENST00000558040 TBC1D2BQ9UPU7 963 aa21.22■□□□□ 0.99
SNX1-203ENST00000558040 NEURL1BA8MQ27 555 aa21.21■□□□□ 0.99
SNX1-203ENST00000558040 RGL2O15211 777 aa21.21■□□□□ 0.99
SNX1-203ENST00000558040 ADRA2BP18089 450 aa21.21■□□□□ 0.99
SNX1-203ENST00000558040 TCIRG1Q13488 830 aa21.21■□□□□ 0.99
SNX1-203ENST00000558040 MEIS3Q99687 375 aa21.21■□□□□ 0.99
SNX1-203ENST00000558040 HDAC5Q9UQL6 1122 aa21.21■□□□□ 0.99
SNX1-203ENST00000558040 ZNF652Q9Y2D9 606 aa21.21■□□□□ 0.99
SNX1-203ENST00000558040 IGKV5-2P06315 115 aa21.2■□□□□ 0.98
SNX1-203ENST00000558040 CWF19L2Q2TBE0 894 aaKnown RBP21.2■□□□□ 0.98
SNX1-203ENST00000558040 C9orf78Q9NZ63 289 aaPredicted RBP21.2■□□□□ 0.98
SNX1-203ENST00000558040 CAMTA2O94983 1202 aa21.19■□□□□ 0.98
SNX1-203ENST00000558040 UBTFL1P0CB47 393 aaPredicted RBP21.19■□□□□ 0.98
SNX1-203ENST00000558040 TRAPPC3LQ5T215 181 aa21.19■□□□□ 0.98
SNX1-203ENST00000558040 CAMKK2Q96RR4 588 aa21.19■□□□□ 0.98
SNX1-203ENST00000558040 USP44Q9H0E7 712 aa21.19■□□□□ 0.98
SNX1-203ENST00000558040 BCORQ6W2J9 1755 aa21.18■□□□□ 0.98
SNX1-203ENST00000558040 AFDNP55196 1824 aaKnown RBP21.18■□□□□ 0.98
SNX1-203ENST00000558040 ATP5J2-PTCD1G3V325 749 aa21.18■□□□□ 0.98
SNX1-203ENST00000558040 SSFA2P28290 1259 aa21.18■□□□□ 0.98
SNX1-203ENST00000558040 EN1Q05925 392 aaPredicted RBP21.18■□□□□ 0.98
SNX1-203ENST00000558040 GCKRQ14397 625 aa21.18■□□□□ 0.98
SNX1-203ENST00000558040 CCDC191Q8NCU4 936 aa21.18■□□□□ 0.98
SNX1-203ENST00000558040 CWC25Q9NXE8 425 aaPredicted RBP21.18■□□□□ 0.98
SNX1-203ENST00000558040 GRM8O00222 908 aa21.17■□□□□ 0.98
SNX1-203ENST00000558040 ZPR1O75312 459 aa21.17■□□□□ 0.98
SNX1-203ENST00000558040 GNAI2P04899 355 aa21.17■□□□□ 0.98
SNX1-203ENST00000558040 TRIM28Q13263 835 aaKnown RBP21.17■□□□□ 0.98
SNX1-203ENST00000558040 HLFQ16534 295 aa21.17■□□□□ 0.98
SNX1-203ENST00000558040 CLEC4GQ6UXB4 293 aa21.17■□□□□ 0.98
SNX1-203ENST00000558040 ISCA1Q9BUE6 129 aa21.17■□□□□ 0.98
SNX1-203ENST00000558040 NARFQ9UHQ1 456 aa21.17■□□□□ 0.98
SNX1-203ENST00000558040 SCN7AQ01118 1682 aa21.17■□□□□ 0.98
SNX1-203ENST00000558040 ANKRD36CQ5JPF3 1778 aa21.17■□□□□ 0.98
SNX1-203ENST00000558040 UBR3Q6ZT12 1888 aa21.17■□□□□ 0.98
SNX1-203ENST00000558040 EP400Q96L91 3159 aa21.17■□□□□ 0.98
SNX1-203ENST00000558040 PHF14O94880 888 aa21.16■□□□□ 0.98
SNX1-203ENST00000558040 RFC4P35249 363 aa21.16■□□□□ 0.98
SNX1-203ENST00000558040 EZH2Q15910 746 aaKnown RBP21.16■□□□□ 0.98
SNX1-203ENST00000558040 B4GALNT3Q6L9W6 998 aa21.16■□□□□ 0.98
SNX1-203ENST00000558040 NUP98P52948 1817 aa21.15■□□□□ 0.98
SNX1-203ENST00000558040 UTYO14607 1347 aa21.15■□□□□ 0.98
SNX1-203ENST00000558040 ARHGEF1Q92888 912 aaKnown RBP21.15■□□□□ 0.98
SNX1-203ENST00000558040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.14■□□□□ 0.97
SNX1-203ENST00000558040 AKT1S1Q96B36 256 aa21.14■□□□□ 0.97
SNX1-203ENST00000558040 C1orf115Q9H7X2 142 aa21.14■□□□□ 0.97
SNX1-203ENST00000558040 TFCP2L1Q9NZI6 479 aa21.14■□□□□ 0.97
SNX1-203ENST00000558040 PCDHB15Q9Y5E8 787 aa21.14■□□□□ 0.97
SNX1-203ENST00000558040 C4AP0C0L4 1744 aa21.13■□□□□ 0.97
SNX1-203ENST00000558040 USP42Q9H9J4 1324 aaKnown RBP21.13■□□□□ 0.97
SNX1-203ENST00000558040 NBPF7P0C2Y1 421 aaPredicted RBP21.13■□□□□ 0.97
SNX1-203ENST00000558040 FLAD1Q8NFF5 587 aa21.13■□□□□ 0.97
SNX1-203ENST00000558040 ZNF827Q17R98 1081 aa21.12■□□□□ 0.97
SNX1-203ENST00000558040 PARP10Q53GL7 1025 aa21.12■□□□□ 0.97
SNX1-203ENST00000558040 USPL1Q5W0Q7 1092 aa21.12■□□□□ 0.97
SNX1-203ENST00000558040 AMIGO3Q86WK7 504 aa21.12■□□□□ 0.97
SNX1-203ENST00000558040 RPAP2Q8IXW5 612 aaPredicted RBP21.12■□□□□ 0.97
SNX1-203ENST00000558040 ZNF34Q8IZ26 560 aa21.12■□□□□ 0.97
SNX1-203ENST00000558040 RWDD1Q9H446 243 aaPredicted RBP21.12■□□□□ 0.97
SNX1-203ENST00000558040 GPTP24298 496 aa21.11■□□□□ 0.97
SNX1-203ENST00000558040 SMIM5Q71RC9 77 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms