RNA–Protein interactions for RNA: ENST00000557920.1

KNSTRN-204, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-204ENST00000557920 RNMTO43148 476 aaKnown RBP15.35■□□□□ 0.05
KNSTRN-204ENST00000557920 TPM3P06753 285 aa15.35■□□□□ 0.05
KNSTRN-204ENST00000557920 ZKSCAN1P17029 563 aaPredicted RBP15.35■□□□□ 0.05
KNSTRN-204ENST00000557920 CEBPAP49715 358 aaPredicted RBP15.35■□□□□ 0.05
KNSTRN-204ENST00000557920 ZNF530Q6P9A1 599 aaPredicted RBP15.35■□□□□ 0.05
KNSTRN-204ENST00000557920 MTERF4Q7Z6M4 381 aaKnown RBP15.35■□□□□ 0.05
KNSTRN-204ENST00000557920 NUTM1Q86Y26 1132 aa15.35■□□□□ 0.05
KNSTRN-204ENST00000557920 UNC5CLQ8IV45 518 aa15.35■□□□□ 0.05
KNSTRN-204ENST00000557920 ZSWIM6Q9HCJ5 1215 aa15.35■□□□□ 0.05
KNSTRN-204ENST00000557920 IL1RAPL2Q9NP60 686 aa15.35■□□□□ 0.05
KNSTRN-204ENST00000557920 SMC3Q9UQE7 1217 aa15.35■□□□□ 0.05
KNSTRN-204ENST00000557920 ADCY9O60503 1353 aa15.35■□□□□ 0.05
KNSTRN-204ENST00000557920 IFIT2P09913 472 aaKnown RBP15.34■□□□□ 0.05
KNSTRN-204ENST00000557920 PDCP20941 246 aa15.34■□□□□ 0.05
KNSTRN-204ENST00000557920 OS9Q13438 667 aaPredicted RBP15.34■□□□□ 0.05
KNSTRN-204ENST00000557920 RNF20Q5VTR2 975 aa15.34■□□□□ 0.05
KNSTRN-204ENST00000557920 NBPF6Q5VWK0 638 aa15.34■□□□□ 0.05
KNSTRN-204ENST00000557920 NBPF4Q96M43 638 aa15.34■□□□□ 0.05
KNSTRN-204ENST00000557920 CHPF2Q9P2E5 772 aa15.34■□□□□ 0.05
KNSTRN-204ENST00000557920 RFX7Q2KHR2 1363 aa15.34■□□□□ 0.05
KNSTRN-204ENST00000557920 ADAMTS7Q9UKP4 1686 aa15.33■□□□□ 0.04
KNSTRN-204ENST00000557920 STX6O43752 255 aa15.33■□□□□ 0.04
KNSTRN-204ENST00000557920 PSME1Q06323 249 aa15.33■□□□□ 0.04
KNSTRN-204ENST00000557920 HSP90AA2PQ14568 343 aaPredicted RBP15.33■□□□□ 0.04
KNSTRN-204ENST00000557920 TSHZ3Q63HK5 1081 aa15.33■□□□□ 0.04
KNSTRN-204ENST00000557920 USP48Q86UV5 1035 aa15.33■□□□□ 0.04
KNSTRN-204ENST00000557920 NECTIN2Q92692 538 aa15.33■□□□□ 0.04
KNSTRN-204ENST00000557920 C9orf78Q9NZ63 289 aaPredicted RBP15.33■□□□□ 0.04
KNSTRN-204ENST00000557920 RBM27Q9P2N5 1060 aaKnown RBP15.33■□□□□ 0.04
KNSTRN-204ENST00000557920 CYP46A1Q9Y6A2 500 aa15.33■□□□□ 0.04
KNSTRN-204ENST00000557920 CCDC171Q6TFL3 1326 aa15.33■□□□□ 0.04
KNSTRN-204ENST00000557920 COL15A1P39059 1388 aa15.33■□□□□ 0.04
KNSTRN-204ENST00000557920 AK9Q5TCS8 1911 aa15.33■□□□□ 0.04
KNSTRN-204ENST00000557920 GIGYF1O75420 1035 aaPredicted RBP15.32■□□□□ 0.04
KNSTRN-204ENST00000557920 F13A1P00488 732 aa15.32■□□□□ 0.04
KNSTRN-204ENST00000557920 NBPF7P0C2Y1 421 aaPredicted RBP15.32■□□□□ 0.04
KNSTRN-204ENST00000557920 EIF2S2P20042 333 aaKnown RBP15.32■□□□□ 0.04
KNSTRN-204ENST00000557920 AK2P54819 239 aa15.32■□□□□ 0.04
KNSTRN-204ENST00000557920 ARHGEF25Q86VW2 580 aa15.32■□□□□ 0.04
KNSTRN-204ENST00000557920 LTV1Q96GA3 475 aaPredicted RBP15.32■□□□□ 0.04
KNSTRN-204ENST00000557920 UPF3BQ9BZI7 483 aaKnown RBP15.32■□□□□ 0.04
KNSTRN-204ENST00000557920 DDX21Q9NR30 783 aaKnown RBP eCLIP15.32■□□□□ 0.04
KNSTRN-204ENST00000557920 HMG20BQ9P0W2 317 aa15.32■□□□□ 0.04
KNSTRN-204ENST00000557920 TSGA10IPQ3SY00 556 aa15.31■□□□□ 0.04
KNSTRN-204ENST00000557920 PDRG1Q9NUG6 133 aa15.31■□□□□ 0.04
KNSTRN-204ENST00000557920 ZNF142P52746 1687 aaPredicted RBP15.31■□□□□ 0.04
KNSTRN-204ENST00000557920 GRM8O00222 908 aa15.3■□□□□ 0.04
KNSTRN-204ENST00000557920 SYT1P21579 422 aa15.3■□□□□ 0.04
KNSTRN-204ENST00000557920 G3BP1Q13283 466 aaKnown RBP eCLIP15.3■□□□□ 0.04
KNSTRN-204ENST00000557920 KRT32Q14532 448 aa15.3■□□□□ 0.04
KNSTRN-204ENST00000557920 NECTIN1Q15223 517 aa15.3■□□□□ 0.04
KNSTRN-204ENST00000557920 LARP1Q6PKG0 1096 aaKnown RBP15.3■□□□□ 0.04
KNSTRN-204ENST00000557920 RUFY3Q7L099 469 aa15.3■□□□□ 0.04
KNSTRN-204ENST00000557920 CHMP4CQ96CF2 233 aa15.3■□□□□ 0.04
KNSTRN-204ENST00000557920 PDCL3Q9H2J4 239 aa15.3■□□□□ 0.04
KNSTRN-204ENST00000557920 LGR6Q9HBX8 967 aa15.3■□□□□ 0.04
KNSTRN-204ENST00000557920 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.3■□□□□ 0.04
KNSTRN-204ENST00000557920 MRC1P22897 1456 aa15.29■□□□□ 0.04
KNSTRN-204ENST00000557920 ELP1O95163 1332 aa15.29■□□□□ 0.04
KNSTRN-204ENST00000557920 MAP4K1Q92918 833 aa15.29■□□□□ 0.04
KNSTRN-204ENST00000557920 MAP3K2Q9Y2U5 619 aa15.29■□□□□ 0.04
KNSTRN-204ENST00000557920 NEXNQ0ZGT2 675 aa15.28■□□□□ 0.04
KNSTRN-204ENST00000557920 CWC27Q6UX04 472 aaKnown RBP15.28■□□□□ 0.04
KNSTRN-204ENST00000557920 C14orf37Q86TY3 774 aa15.28■□□□□ 0.04
KNSTRN-204ENST00000557920 JCADQ9P266 1359 aa15.27■□□□□ 0.04
KNSTRN-204ENST00000557920 CASTP20810 708 aaKnown RBP15.27■□□□□ 0.04
KNSTRN-204ENST00000557920 KIAA2012Q0VF49 1180 aa15.27■□□□□ 0.04
KNSTRN-204ENST00000557920 NUTM2GQ5VZR2 741 aa15.27■□□□□ 0.04
KNSTRN-204ENST00000557920 RASEFQ8IZ41 740 aa15.27■□□□□ 0.04
KNSTRN-204ENST00000557920 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.27■□□□□ 0.04
KNSTRN-204ENST00000557920 NSFL1CQ9UNZ2 370 aaKnown RBP15.27■□□□□ 0.04
KNSTRN-204ENST00000557920 KIF1AQ12756 1690 aa15.27■□□□□ 0.03
KNSTRN-204ENST00000557920 DYNC1I1O14576 645 aa15.26■□□□□ 0.03
KNSTRN-204ENST00000557920 GCP02774 474 aa15.26■□□□□ 0.03
KNSTRN-204ENST00000557920 PTMAP06454 111 aaKnown RBP15.26■□□□□ 0.03
KNSTRN-204ENST00000557920 SASS6Q6UVJ0 657 aa15.26■□□□□ 0.03
KNSTRN-204ENST00000557920 USHBP1Q8N6Y0 703 aa15.26■□□□□ 0.03
KNSTRN-204ENST00000557920 JAKMIP1Q96N16 626 aaKnown RBP15.26■□□□□ 0.03
KNSTRN-204ENST00000557920 USP25Q9UHP3 1055 aa15.26■□□□□ 0.03
KNSTRN-204ENST00000557920 MTMR6Q9Y217 621 aa15.26■□□□□ 0.03
KNSTRN-204ENST00000557920 SIPA1L3O60292 1781 aaPredicted RBP15.26■□□□□ 0.03
KNSTRN-204ENST00000557920 CAVIN2O95810 425 aa15.25■□□□□ 0.03
KNSTRN-204ENST00000557920 HMGN5P82970 282 aaKnown RBP15.25■□□□□ 0.03
KNSTRN-204ENST00000557920 CREB3L3Q68CJ9 461 aa15.25■□□□□ 0.03
KNSTRN-204ENST00000557920 AACSQ86V21 672 aa15.25■□□□□ 0.03
KNSTRN-204ENST00000557920 ANKRD24Q8TF21 1146 aa15.25■□□□□ 0.03
KNSTRN-204ENST00000557920 PRIMPOLQ96LW4 560 aa15.25■□□□□ 0.03
KNSTRN-204ENST00000557920 IL25Q9H293 177 aa15.25■□□□□ 0.03
KNSTRN-204ENST00000557920 GOLGA6L6A8MZA4 724 aa15.24■□□□□ 0.03
KNSTRN-204ENST00000557920 GJB2P29033 226 aa15.24■□□□□ 0.03
KNSTRN-204ENST00000557920 KRT85P78386 507 aa15.24■□□□□ 0.03
KNSTRN-204ENST00000557920 ESCO1Q5FWF5 840 aa15.24■□□□□ 0.03
KNSTRN-204ENST00000557920 FOXD4L5Q5VV16 416 aaPredicted RBP15.24■□□□□ 0.03
KNSTRN-204ENST00000557920 FOXD4L4Q8WXT5 416 aaPredicted RBP15.24■□□□□ 0.03
KNSTRN-204ENST00000557920 SCAND2PQ9GZW5 306 aaPredicted RBP15.24■□□□□ 0.03
KNSTRN-204ENST00000557920 COPRSQ9NQ92 184 aa15.24■□□□□ 0.03
KNSTRN-204ENST00000557920 RBM8AQ9Y5S9 174 aaKnown RBP15.24■□□□□ 0.03
KNSTRN-204ENST00000557920 GADD45BO75293 160 aaPredicted RBP15.23■□□□□ 0.03
KNSTRN-204ENST00000557920 KCNJ4P48050 445 aa15.23■□□□□ 0.03
KNSTRN-204ENST00000557920 USPL1Q5W0Q7 1092 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms