RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 MSNP26038 577 aaKnown RBP16.03■□□□□ 0.16
CPNE6-204ENST00000557829 NEK4P51957 841 aa16.03■□□□□ 0.16
CPNE6-204ENST00000557829 LRSAM1Q6UWE0 723 aa16.03■□□□□ 0.16
CPNE6-204ENST00000557829 RBSNQ9H1K0 784 aa16.03■□□□□ 0.16
CPNE6-204ENST00000557829 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.03■□□□□ 0.16
CPNE6-204ENST00000557829 OVOS2A0A0G2JMS6 1433 aa16.02■□□□□ 0.16
CPNE6-204ENST00000557829 F6X3S4 739 aa16.02■□□□□ 0.16
CPNE6-204ENST00000557829 RNMTO43148 476 aaKnown RBP16.02■□□□□ 0.16
CPNE6-204ENST00000557829 POTEAQ6S8J7 498 aa16.02■□□□□ 0.16
CPNE6-204ENST00000557829 SPG7Q9UQ90 795 aa16.02■□□□□ 0.16
CPNE6-204ENST00000557829 CYP27B1O15528 508 aa16.02■□□□□ 0.15
CPNE6-204ENST00000557829 PHKG2P15735 406 aa16.02■□□□□ 0.15
CPNE6-204ENST00000557829 CHMLP26374 656 aa16.02■□□□□ 0.15
CPNE6-204ENST00000557829 NGLY1Q96IV0 654 aa16.02■□□□□ 0.15
CPNE6-204ENST00000557829 PLCH1Q4KWH8 1693 aa16.01■□□□□ 0.15
CPNE6-204ENST00000557829 PKD1L3Q7Z443 1732 aa16.01■□□□□ 0.15
CPNE6-204ENST00000557829 SCN11AQ9UI33 1791 aa16.01■□□□□ 0.15
CPNE6-204ENST00000557829 MCM5P33992 734 aa16.01■□□□□ 0.15
CPNE6-204ENST00000557829 FLIIQ13045 1269 aa16.01■□□□□ 0.15
CPNE6-204ENST00000557829 PKNOX2Q96KN3 472 aa16.01■□□□□ 0.15
CPNE6-204ENST00000557829 NOL7Q9UMY1 257 aaKnown RBP16.01■□□□□ 0.15
CPNE6-204ENST00000557829 ADAMTS7Q9UKP4 1686 aa16.01■□□□□ 0.15
CPNE6-204ENST00000557829 IL2RBP14784 551 aa16■□□□□ 0.15
CPNE6-204ENST00000557829 PRIM1P49642 420 aaKnown RBP16■□□□□ 0.15
CPNE6-204ENST00000557829 TAF7Q15545 349 aaPredicted RBP16■□□□□ 0.15
CPNE6-204ENST00000557829 PDZRN4Q6ZMN7 1036 aaPredicted RBP16■□□□□ 0.15
CPNE6-204ENST00000557829 BCL9LQ86UU0 1499 aa16■□□□□ 0.15
CPNE6-204ENST00000557829 ZNF500O60304 480 aaPredicted RBP16■□□□□ 0.15
CPNE6-204ENST00000557829 EXOC6BQ9Y2D4 811 aa16■□□□□ 0.15
CPNE6-204ENST00000557829 PLEKHG2Q9H7P9 1386 aa16■□□□□ 0.15
CPNE6-204ENST00000557829 KDM6AO15550 1401 aaPredicted RBP15.99■□□□□ 0.15
CPNE6-204ENST00000557829 ILDR2Q71H61 639 aa15.99■□□□□ 0.15
CPNE6-204ENST00000557829 PARP4Q9UKK3 1724 aaKnown RBP15.99■□□□□ 0.15
CPNE6-204ENST00000557829 SLIT2O94813 1529 aa15.99■□□□□ 0.15
CPNE6-204ENST00000557829 RAB11FIP3O75154 756 aa15.99■□□□□ 0.15
CPNE6-204ENST00000557829 ZCRB1Q8TBF4 217 aaKnown RBP15.99■□□□□ 0.15
CPNE6-204ENST00000557829 IFNL2Q8IZJ0 200 aa15.98■□□□□ 0.15
CPNE6-204ENST00000557829 SYAP1Q96A49 352 aaPredicted RBP15.98■□□□□ 0.15
CPNE6-204ENST00000557829 TMEM63CQ9P1W3 806 aa15.98■□□□□ 0.15
CPNE6-204ENST00000557829 TEFQ10587 303 aa15.97■□□□□ 0.15
CPNE6-204ENST00000557829 FKBP5Q13451 457 aaPredicted RBP15.97■□□□□ 0.15
CPNE6-204ENST00000557829 KLHL34Q8N239 644 aa15.97■□□□□ 0.15
CPNE6-204ENST00000557829 FNBP4Q8N3X1 1017 aaPredicted RBP15.97■□□□□ 0.15
CPNE6-204ENST00000557829 PNMA6EA0A0J9YXQ4 647 aa15.97■□□□□ 0.15
CPNE6-204ENST00000557829 SSH3Q8TE77 659 aa15.97■□□□□ 0.15
CPNE6-204ENST00000557829 KCNQ3O43525 872 aa15.96■□□□□ 0.15
CPNE6-204ENST00000557829 USP21Q9UK80 565 aa15.96■□□□□ 0.15
CPNE6-204ENST00000557829 NRAPQ86VF7 1730 aa15.96■□□□□ 0.15
CPNE6-204ENST00000557829 TRIM6-TRIM34B2RNG4 842 aa15.96■□□□□ 0.14
CPNE6-204ENST00000557829 CHMP4AQ9BY43 222 aa15.96■□□□□ 0.14
CPNE6-204ENST00000557829 RBM27Q9P2N5 1060 aaKnown RBP15.96■□□□□ 0.14
CPNE6-204ENST00000557829 HSPA4P34932 840 aa15.95■□□□□ 0.14
CPNE6-204ENST00000557829 KIAA1211Q6ZU35 1233 aa15.95■□□□□ 0.14
CPNE6-204ENST00000557829 ANO2Q9NQ90 1003 aa15.95■□□□□ 0.14
CPNE6-204ENST00000557829 PALD1Q9ULE6 856 aa15.95■□□□□ 0.14
CPNE6-204ENST00000557829 DISP2A7MBM2 1401 aa15.95■□□□□ 0.14
CPNE6-204ENST00000557829 PCDH11XQ9BZA7 1347 aa15.95■□□□□ 0.14
CPNE6-204ENST00000557829 PCDH11YQ9BZA8 1340 aa15.95■□□□□ 0.14
CPNE6-204ENST00000557829 BTBD11A6QL63 1104 aa15.94■□□□□ 0.14
CPNE6-204ENST00000557829 DDX54Q8TDD1 881 aaKnown RBP15.94■□□□□ 0.14
CPNE6-204ENST00000557829 RILPL2Q969X0 211 aa15.94■□□□□ 0.14
CPNE6-204ENST00000557829 USP44Q9H0E7 712 aa15.94■□□□□ 0.14
CPNE6-204ENST00000557829 PDCL3Q9H2J4 239 aa15.94■□□□□ 0.14
CPNE6-204ENST00000557829 CCDC39Q9UFE4 941 aa15.94■□□□□ 0.14
CPNE6-204ENST00000557829 LRRFIP2Q9Y608 721 aaKnown RBP15.94■□□□□ 0.14
CPNE6-204ENST00000557829 WDR33Q9C0J8 1336 aaKnown RBP15.94■□□□□ 0.14
CPNE6-204ENST00000557829 PHF14O94880 888 aa15.94■□□□□ 0.14
CPNE6-204ENST00000557829 POLA2Q14181 598 aa15.94■□□□□ 0.14
CPNE6-204ENST00000557829 NWD2Q9ULI1 1742 aa15.94■□□□□ 0.14
CPNE6-204ENST00000557829 SPATA31A1Q5TZJ5 1347 aa15.94■□□□□ 0.14
CPNE6-204ENST00000557829 SYCE3A1L190 88 aa15.93■□□□□ 0.14
CPNE6-204ENST00000557829 UBTFL1P0CB47 393 aaPredicted RBP15.93■□□□□ 0.14
CPNE6-204ENST00000557829 CSPP1Q1MSJ5 1256 aa15.93■□□□□ 0.14
CPNE6-204ENST00000557829 DCAF5Q96JK2 942 aa15.93■□□□□ 0.14
CPNE6-204ENST00000557829 ZKSCAN5Q9Y2L8 839 aa15.93■□□□□ 0.14
CPNE6-204ENST00000557829 SHANK3Q9BYB0 1731 aa15.93■□□□□ 0.14
CPNE6-204ENST00000557829 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.93■□□□□ 0.14
CPNE6-204ENST00000557829 TMEM87AQ8NBN3 555 aa15.93■□□□□ 0.14
CPNE6-204ENST00000557829 NECTIN2Q92692 538 aa15.93■□□□□ 0.14
CPNE6-204ENST00000557829 SLC52A2Q9HAB3 445 aa15.93■□□□□ 0.14
CPNE6-204ENST00000557829 EIF4A1P60842 406 aaKnown RBP15.92■□□□□ 0.14
CPNE6-204ENST00000557829 ZNF772Q68DY9 489 aaPredicted RBP15.92■□□□□ 0.14
CPNE6-204ENST00000557829 NFATC2IPQ8NCF5 419 aa15.92■□□□□ 0.14
CPNE6-204ENST00000557829 MAP7D2Q96T17 732 aa15.92■□□□□ 0.14
CPNE6-204ENST00000557829 TSPY26PQ9H489 355 aa15.92■□□□□ 0.14
CPNE6-204ENST00000557829 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.92■□□□□ 0.14
CPNE6-204ENST00000557829 NSFL1CQ9UNZ2 370 aaKnown RBP15.92■□□□□ 0.14
CPNE6-204ENST00000557829 UVSSAQ2YD98 709 aa15.92■□□□□ 0.14
CPNE6-204ENST00000557829 TSHZ3Q63HK5 1081 aa15.92■□□□□ 0.14
CPNE6-204ENST00000557829 QTRT2Q9H974 415 aaKnown RBP15.92■□□□□ 0.14
CPNE6-204ENST00000557829 SPATA31A5Q5VU36 1347 aa15.91■□□□□ 0.14
CPNE6-204ENST00000557829 SPATA31A7Q8IWB4 1347 aa15.91■□□□□ 0.14
CPNE6-204ENST00000557829 HOXB7P09629 217 aa15.91■□□□□ 0.14
CPNE6-204ENST00000557829 UNC5CLQ8IV45 518 aa15.91■□□□□ 0.14
CPNE6-204ENST00000557829 C5P01031 1676 aa15.91■□□□□ 0.14
CPNE6-204ENST00000557829 FAM184AQ8NB25 1140 aa15.9■□□□□ 0.14
CPNE6-204ENST00000557829 ATRNO75882 1429 aa15.9■□□□□ 0.14
CPNE6-204ENST00000557829 GLI3P10071 1580 aa15.9■□□□□ 0.14
CPNE6-204ENST00000557829 SLC39A6Q13433 755 aa15.9■□□□□ 0.14
CPNE6-204ENST00000557829 NKX1-1Q15270 411 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms