RNA–Protein interactions for RNA: ENST00000557662.1

RIPK3-207, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-207ENST00000557662 CCDC24Q8N4L8 307 aa30.51■■■□□ 2.47
RIPK3-207ENST00000557662 CNBD1Q8NA66 436 aa30.51■■■□□ 2.47
RIPK3-207ENST00000557662 NFE2L2Q16236 605 aa30.49■■■□□ 2.47
RIPK3-207ENST00000557662 NPM2Q86SE8 214 aaKnown RBP30.49■■■□□ 2.47
RIPK3-207ENST00000557662 MIS18AQ9NYP9 233 aa30.48■■■□□ 2.47
RIPK3-207ENST00000557662 SRGNP10124 158 aa30.47■■■□□ 2.47
RIPK3-207ENST00000557662 KLRG2A4D1S0 409 aaPredicted RBP30.46■■■□□ 2.47
RIPK3-207ENST00000557662 APLP1P51693 650 aa30.46■■■□□ 2.47
RIPK3-207ENST00000557662 STYK1Q6J9G0 422 aa30.46■■■□□ 2.47
RIPK3-207ENST00000557662 LTBP3Q9NS15 1303 aa30.46■■■□□ 2.47
RIPK3-207ENST00000557662 PNISRQ8TF01 805 aaKnown RBP30.45■■■□□ 2.47
RIPK3-207ENST00000557662 ZNF622Q969S3 477 aaKnown RBP eCLIP30.45■■■□□ 2.47
RIPK3-207ENST00000557662 ZNF652Q9Y2D9 606 aa30.45■■■□□ 2.47
RIPK3-207ENST00000557662 EIF4A1P60842 406 aaKnown RBP30.44■■■□□ 2.46
RIPK3-207ENST00000557662 ST5P78524 1137 aa30.44■■■□□ 2.46
RIPK3-207ENST00000557662 RRAGCQ9HB90 399 aa30.44■■■□□ 2.46
RIPK3-207ENST00000557662 GLTPD2A6NH11 291 aa30.43■■■□□ 2.46
RIPK3-207ENST00000557662 THUMPD2Q9BTF0 503 aaKnown RBP30.43■■■□□ 2.46
RIPK3-207ENST00000557662 C21orf2O43822 256 aa30.42■■■□□ 2.46
RIPK3-207ENST00000557662 NEFMP07197 916 aa30.42■■■□□ 2.46
RIPK3-207ENST00000557662 FSTL1Q12841 308 aa30.42■■■□□ 2.46
RIPK3-207ENST00000557662 DNAJC5GQ8N7S2 189 aa30.42■■■□□ 2.46
RIPK3-207ENST00000557662 RALBP1Q15311 655 aa30.41■■■□□ 2.46
RIPK3-207ENST00000557662 CNKSR1Q969H4 720 aa30.41■■■□□ 2.46
RIPK3-207ENST00000557662 MASTLQ96GX5 879 aa30.41■■■□□ 2.46
RIPK3-207ENST00000557662 HLFQ16534 295 aa30.4■■■□□ 2.46
RIPK3-207ENST00000557662 PRPF40BQ6NWY9 871 aaKnown RBP30.4■■■□□ 2.46
RIPK3-207ENST00000557662 NBPF5PQ86XG9 351 aaPredicted RBP30.4■■■□□ 2.46
RIPK3-207ENST00000557662 C7orf43Q8WVR3 580 aa30.4■■■□□ 2.46
RIPK3-207ENST00000557662 PNNQ9H307 717 aaKnown RBP30.39■■■□□ 2.46
RIPK3-207ENST00000557662 NIP7Q9Y221 180 aaKnown RBP eCLIP30.39■■■□□ 2.46
RIPK3-207ENST00000557662 C16orf71Q8IYS4 520 aaPredicted RBP30.37■■■□□ 2.45
RIPK3-207ENST00000557662 POTECB2RU33 542 aa30.36■■■□□ 2.45
RIPK3-207ENST00000557662 ERVV-1B6SEH8 477 aa30.36■■■□□ 2.45
RIPK3-207ENST00000557662 MAPK8IP3Q9UPT6 1336 aa30.36■■■□□ 2.45
RIPK3-207ENST00000557662 TPTE2Q6XPS3 522 aa30.35■■■□□ 2.45
RIPK3-207ENST00000557662 RIC1Q4ADV7 1423 aa30.35■■■□□ 2.45
RIPK3-207ENST00000557662 SNED1Q8TER0 1413 aa30.35■■■□□ 2.45
RIPK3-207ENST00000557662 ANKRD36CQ5JPF3 1778 aa30.35■■■□□ 2.45
RIPK3-207ENST00000557662 IBTKQ9P2D0 1353 aaPredicted RBP30.34■■■□□ 2.45
RIPK3-207ENST00000557662 MAP3K15Q6ZN16 1313 aa30.34■■■□□ 2.45
RIPK3-207ENST00000557662 LRP10Q7Z4F1 713 aa30.34■■■□□ 2.45
RIPK3-207ENST00000557662 TAOK3Q9H2K8 898 aa30.34■■■□□ 2.45
RIPK3-207ENST00000557662 ZNF219Q9P2Y4 722 aaPredicted RBP30.34■■■□□ 2.45
RIPK3-207ENST00000557662 ERBB4Q15303 1308 aa30.33■■■□□ 2.45
RIPK3-207ENST00000557662 NPHP1O15259 732 aa30.33■■■□□ 2.45
RIPK3-207ENST00000557662 NPR1P16066 1061 aa30.33■■■□□ 2.45
RIPK3-207ENST00000557662 SOGA3Q5TF21 947 aa30.33■■■□□ 2.45
RIPK3-207ENST00000557662 ABCC12Q96J65 1359 aa30.32■■■□□ 2.44
RIPK3-207ENST00000557662 VEGFAP15692 232 aaPredicted RBP30.32■■■□□ 2.44
RIPK3-207ENST00000557662 TTLL7Q6ZT98 887 aa30.32■■■□□ 2.44
RIPK3-207ENST00000557662 SCN4AP35499 1836 aa30.31■■■□□ 2.44
RIPK3-207ENST00000557662 CRY2Q49AN0 593 aa30.3■■■□□ 2.44
RIPK3-207ENST00000557662 ERFEQ4G0M1 354 aa30.3■■■□□ 2.44
RIPK3-207ENST00000557662 SMC1BQ8NDV3 1235 aa30.3■■■□□ 2.44
RIPK3-207ENST00000557662 BABAM1Q9NWV8 329 aa30.3■■■□□ 2.44
RIPK3-207ENST00000557662 MYBBP1AQ9BQG0 1328 aaKnown RBP30.29■■■□□ 2.44
RIPK3-207ENST00000557662 TMPOP42166 694 aaKnown RBP30.29■■■□□ 2.44
RIPK3-207ENST00000557662 UBN2Q6ZU65 1347 aa30.28■■■□□ 2.44
RIPK3-207ENST00000557662 RIPK4P57078 832 aa30.28■■■□□ 2.44
RIPK3-207ENST00000557662 RRP7AQ9Y3A4 280 aaKnown RBP30.28■■■□□ 2.44
RIPK3-207ENST00000557662 PDIA6Q15084 440 aa30.27■■■□□ 2.44
RIPK3-207ENST00000557662 LAMB2P55268 1798 aa30.26■■■□□ 2.44
RIPK3-207ENST00000557662 DDX10Q13206 875 aaKnown RBP30.26■■■□□ 2.43
RIPK3-207ENST00000557662 CCDC93Q567U6 631 aa30.26■■■□□ 2.43
RIPK3-207ENST00000557662 TSPYL4Q9UJ04 414 aa30.26■■■□□ 2.43
RIPK3-207ENST00000557662 HTRA3P83110 453 aa30.25■■■□□ 2.43
RIPK3-207ENST00000557662 DPY19L2Q6NUT2 758 aa30.25■■■□□ 2.43
RIPK3-207ENST00000557662 ZNF34Q8IZ26 560 aa30.25■■■□□ 2.43
RIPK3-207ENST00000557662 NGEFQ8N5V2 710 aa30.25■■■□□ 2.43
RIPK3-207ENST00000557662 PCNTO95613 3336 aa30.25■■■□□ 2.43
RIPK3-207ENST00000557662 FAM177BA6PVY3 158 aa30.24■■■□□ 2.43
RIPK3-207ENST00000557662 MYL6BP14649 208 aa30.24■■■□□ 2.43
RIPK3-207ENST00000557662 KIF6Q6ZMV9 814 aa30.24■■■□□ 2.43
RIPK3-207ENST00000557662 NYXQ9GZU5 481 aa30.24■■■□□ 2.43
RIPK3-207ENST00000557662 GIGYF2Q6Y7W6 1299 aaKnown RBP30.23■■■□□ 2.43
RIPK3-207ENST00000557662 FKBP4Q02790 459 aaKnown RBP eCLIP30.22■■■□□ 2.43
RIPK3-207ENST00000557662 OLFM4Q6UX06 510 aa30.22■■■□□ 2.43
RIPK3-207ENST00000557662 NUTM1Q86Y26 1132 aa30.22■■■□□ 2.43
RIPK3-207ENST00000557662 KLRG1Q96E93 195 aa30.22■■■□□ 2.43
RIPK3-207ENST00000557662 ADAMTSL1Q8N6G6 1762 aa30.21■■■□□ 2.43
RIPK3-207ENST00000557662 LMOD3Q0VAK6 560 aa30.21■■■□□ 2.43
RIPK3-207ENST00000557662 JMYQ8N9B5 988 aa30.21■■■□□ 2.43
RIPK3-207ENST00000557662 ZBTB3Q9H5J0 574 aa30.21■■■□□ 2.43
RIPK3-207ENST00000557662 NTSR2O95665 410 aa30.2■■■□□ 2.43
RIPK3-207ENST00000557662 ALDH1B1P30837 517 aa30.2■■■□□ 2.43
RIPK3-207ENST00000557662 HOXA10P31260 410 aaPredicted RBP30.2■■■□□ 2.43
RIPK3-207ENST00000557662 PROSER3Q2NL68 480 aa30.19■■■□□ 2.42
RIPK3-207ENST00000557662 SUSD4Q5VX71 490 aa30.19■■■□□ 2.42
RIPK3-207ENST00000557662 L3MBTL3Q96JM7 780 aaPredicted RBP30.19■■■□□ 2.42
RIPK3-207ENST00000557662 DDNO94850 711 aaPredicted RBP30.18■■■□□ 2.42
RIPK3-207ENST00000557662 GPTP24298 496 aa30.18■■■□□ 2.42
RIPK3-207ENST00000557662 RTKN2Q8IZC4 609 aa30.18■■■□□ 2.42
RIPK3-207ENST00000557662 TRIM35Q9UPQ4 493 aa30.18■■■□□ 2.42
RIPK3-207ENST00000557662 COL4A5P29400 1685 aa30.17■■■□□ 2.42
RIPK3-207ENST00000557662 CHL1O00533 1208 aa30.16■■■□□ 2.42
RIPK3-207ENST00000557662 GTF2E1P29083 439 aaPredicted RBP30.16■■■□□ 2.42
RIPK3-207ENST00000557662 IFFO2Q5TF58 517 aa30.16■■■□□ 2.42
RIPK3-207ENST00000557662 CCDC146Q8IYE0 955 aa30.15■■■□□ 2.42
RIPK3-207ENST00000557662 RUNDC1Q96C34 613 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms