RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 TJP1Q07157 1748 aa14.05□□□□□ -0.16
PSMC6-215ENST00000557517 SERPINB2P05120 415 aa14.05□□□□□ -0.16
PSMC6-215ENST00000557517 DDX10Q13206 875 aaKnown RBP14.05□□□□□ -0.16
PSMC6-215ENST00000557517 JMYQ8N9B5 988 aa14.05□□□□□ -0.16
PSMC6-215ENST00000557517 NEFMP07197 916 aa14.04□□□□□ -0.16
PSMC6-215ENST00000557517 RBM46Q8TBY0 533 aaKnown RBP14.04□□□□□ -0.16
PSMC6-215ENST00000557517 TBC1D2BQ9UPU7 963 aa14.04□□□□□ -0.16
PSMC6-215ENST00000557517 PRAMEF22A3QJZ6 481 aa14.03□□□□□ -0.16
PSMC6-215ENST00000557517 CHRNA5P30532 468 aa14.03□□□□□ -0.16
PSMC6-215ENST00000557517 NFE2L2Q16236 605 aa14.03□□□□□ -0.16
PSMC6-215ENST00000557517 DALRD3Q5D0E6 543 aaKnown RBP14.03□□□□□ -0.16
PSMC6-215ENST00000557517 ARHGAP27Q6ZUM4 889 aa14.03□□□□□ -0.16
PSMC6-215ENST00000557517 PNISRQ8TF01 805 aaKnown RBP14.03□□□□□ -0.16
PSMC6-215ENST00000557517 KLRG1Q96E93 195 aa14.03□□□□□ -0.16
PSMC6-215ENST00000557517 NMRK2Q9NPI5 230 aa14.03□□□□□ -0.16
PSMC6-215ENST00000557517 ARFGEF1Q9Y6D6 1849 aa14.03□□□□□ -0.16
PSMC6-215ENST00000557517 C4AP0C0L4 1744 aa14.02□□□□□ -0.16
PSMC6-215ENST00000557517 CAMTA2O94983 1202 aa14.02□□□□□ -0.17
PSMC6-215ENST00000557517 COL13A1Q5TAT6 717 aaPredicted RBP14.02□□□□□ -0.17
PSMC6-215ENST00000557517 TBC1D9BQ66K14 1250 aa14.02□□□□□ -0.17
PSMC6-215ENST00000557517 RGL2O15211 777 aa14.01□□□□□ -0.17
PSMC6-215ENST00000557517 CLEC4GQ6UXB4 293 aa14.01□□□□□ -0.17
PSMC6-215ENST00000557517 MIS18AQ9NYP9 233 aa14.01□□□□□ -0.17
PSMC6-215ENST00000557517 NBPF26B4DH59 902 aa14□□□□□ -0.17
PSMC6-215ENST00000557517 NBPF10Q6P3W6 841 aaKnown RBP14□□□□□ -0.17
PSMC6-215ENST00000557517 BICDL1Q6ZP65 573 aa14□□□□□ -0.17
PSMC6-215ENST00000557517 NPM2Q86SE8 214 aaKnown RBP14□□□□□ -0.17
PSMC6-215ENST00000557517 DZIP3Q86Y13 1208 aaKnown RBP14□□□□□ -0.17
PSMC6-215ENST00000557517 NBPF15Q8N660 670 aa14□□□□□ -0.17
PSMC6-215ENST00000557517 BRIP1Q9BX63 1249 aa14□□□□□ -0.17
PSMC6-215ENST00000557517 EIF4A1P60842 406 aaKnown RBP13.99□□□□□ -0.17
PSMC6-215ENST00000557517 FSTL1Q12841 308 aa13.99□□□□□ -0.17
PSMC6-215ENST00000557517 SETDB2Q96T68 719 aa13.99□□□□□ -0.17
PSMC6-215ENST00000557517 PDZRN3Q9UPQ7 1066 aa13.99□□□□□ -0.17
PSMC6-215ENST00000557517 ZNF330Q9Y3S2 320 aaPredicted RBP13.99□□□□□ -0.17
PSMC6-215ENST00000557517 UBR2Q8IWV8 1755 aa13.99□□□□□ -0.17
PSMC6-215ENST00000557517 H0YIN7 160 aa13.98□□□□□ -0.17
PSMC6-215ENST00000557517 TNRC6CQ9HCJ0 1690 aaKnown RBP13.98□□□□□ -0.17
PSMC6-215ENST00000557517 MYBBP1AQ9BQG0 1328 aaKnown RBP13.97□□□□□ -0.17
PSMC6-215ENST00000557517 PDE6BP35913 854 aa13.97□□□□□ -0.17
PSMC6-215ENST00000557517 PIP4K2AP48426 406 aaPredicted RBP13.97□□□□□ -0.17
PSMC6-215ENST00000557517 HTRA3P83110 453 aa13.97□□□□□ -0.17
PSMC6-215ENST00000557517 PRR5LQ6MZQ0 368 aa13.97□□□□□ -0.17
PSMC6-215ENST00000557517 TTLL6Q8N841 843 aa13.97□□□□□ -0.17
PSMC6-215ENST00000557517 THUMPD2Q9BTF0 503 aaKnown RBP13.97□□□□□ -0.17
PSMC6-215ENST00000557517 BABAM1Q9NWV8 329 aa13.97□□□□□ -0.17
PSMC6-215ENST00000557517 PCNTO95613 3336 aa13.97□□□□□ -0.17
PSMC6-215ENST00000557517 MAPK8IP3Q9UPT6 1336 aa13.96□□□□□ -0.17
PSMC6-215ENST00000557517 SBF1O95248 1867 aa13.96□□□□□ -0.17
PSMC6-215ENST00000557517 TMPOP42166 694 aaKnown RBP13.96□□□□□ -0.17
PSMC6-215ENST00000557517 PRELPP51888 382 aa13.96□□□□□ -0.17
PSMC6-215ENST00000557517 RIPK4P57078 832 aa13.96□□□□□ -0.17
PSMC6-215ENST00000557517 C2CD5Q86YS7 1000 aa13.96□□□□□ -0.17
PSMC6-215ENST00000557517 CARMIL3Q8ND23 1372 aa13.96□□□□□ -0.18
PSMC6-215ENST00000557517 C9orf131Q5VYM1 1079 aa13.95□□□□□ -0.18
PSMC6-215ENST00000557517 TNS4Q8IZW8 715 aa13.95□□□□□ -0.18
PSMC6-215ENST00000557517 SIPA1L3O60292 1781 aaPredicted RBP13.94□□□□□ -0.18
PSMC6-215ENST00000557517 KLRG2A4D1S0 409 aaPredicted RBP13.94□□□□□ -0.18
PSMC6-215ENST00000557517 C16orf71Q8IYS4 520 aaPredicted RBP13.94□□□□□ -0.18
PSMC6-215ENST00000557517 PRKRIP1Q9H875 184 aaPredicted RBP13.94□□□□□ -0.18
PSMC6-215ENST00000557517 ZNF652Q9Y2D9 606 aa13.94□□□□□ -0.18
PSMC6-215ENST00000557517 KDM2BQ8NHM5 1336 aa13.93□□□□□ -0.18
PSMC6-215ENST00000557517 ERVV-1B6SEH8 477 aa13.93□□□□□ -0.18
PSMC6-215ENST00000557517 SRGNP10124 158 aa13.93□□□□□ -0.18
PSMC6-215ENST00000557517 HLFQ16534 295 aa13.93□□□□□ -0.18
PSMC6-215ENST00000557517 TPTE2Q6XPS3 522 aa13.93□□□□□ -0.18
PSMC6-215ENST00000557517 CCDC24Q8N4L8 307 aa13.93□□□□□ -0.18
PSMC6-215ENST00000557517 CNBD1Q8NA66 436 aa13.93□□□□□ -0.18
PSMC6-215ENST00000557517 ADAMTS8Q9UP79 889 aa13.93□□□□□ -0.18
PSMC6-215ENST00000557517 LMOD3Q0VAK6 560 aa13.92□□□□□ -0.18
PSMC6-215ENST00000557517 RUNDC1Q96C34 613 aa13.92□□□□□ -0.18
PSMC6-215ENST00000557517 NRXN2Q9P2S2 1712 aa13.91□□□□□ -0.18
PSMC6-215ENST00000557517 CHL1O00533 1208 aa13.91□□□□□ -0.18
PSMC6-215ENST00000557517 ST5P78524 1137 aa13.91□□□□□ -0.18
PSMC6-215ENST00000557517 STYK1Q6J9G0 422 aa13.91□□□□□ -0.18
PSMC6-215ENST00000557517 NBPF5PQ86XG9 351 aaPredicted RBP13.91□□□□□ -0.18
PSMC6-215ENST00000557517 TSPYL4Q9UJ04 414 aa13.91□□□□□ -0.18
PSMC6-215ENST00000557517 NIP7Q9Y221 180 aaKnown RBP eCLIP13.91□□□□□ -0.18
PSMC6-215ENST00000557517 GALR2O43603 387 aaPredicted RBP13.9□□□□□ -0.18
PSMC6-215ENST00000557517 LMNB1P20700 586 aa13.9□□□□□ -0.18
PSMC6-215ENST00000557517 PDIA6Q15084 440 aa13.9□□□□□ -0.18
PSMC6-215ENST00000557517 LRP10Q7Z4F1 713 aa13.9□□□□□ -0.18
PSMC6-215ENST00000557517 SMC1BQ8NDV3 1235 aa13.9□□□□□ -0.18
PSMC6-215ENST00000557517 CNKSR1Q969H4 720 aa13.9□□□□□ -0.18
PSMC6-215ENST00000557517 ZNF622Q969S3 477 aaKnown RBP eCLIP13.9□□□□□ -0.18
PSMC6-215ENST00000557517 MASTLQ96GX5 879 aa13.9□□□□□ -0.18
PSMC6-215ENST00000557517 RNF181Q9P0P0 153 aa13.9□□□□□ -0.18
PSMC6-215ENST00000557517 TRIM35Q9UPQ4 493 aa13.9□□□□□ -0.18
PSMC6-215ENST00000557517 RRP7AQ9Y3A4 280 aaKnown RBP13.9□□□□□ -0.18
PSMC6-215ENST00000557517 ERBB4Q15303 1308 aa13.9□□□□□ -0.19
PSMC6-215ENST00000557517 NFKBIEO00221 500 aa13.89□□□□□ -0.19
PSMC6-215ENST00000557517 CCDC146Q8IYE0 955 aa13.89□□□□□ -0.19
PSMC6-215ENST00000557517 C7orf43Q8WVR3 580 aa13.89□□□□□ -0.19
PSMC6-215ENST00000557517 MAP3K15Q6ZN16 1313 aa13.89□□□□□ -0.19
PSMC6-215ENST00000557517 ZC3H4Q9UPT8 1303 aaKnown RBP13.89□□□□□ -0.19
PSMC6-215ENST00000557517 NPHP1O15259 732 aa13.88□□□□□ -0.19
PSMC6-215ENST00000557517 C21orf2O43822 256 aa13.88□□□□□ -0.19
PSMC6-215ENST00000557517 WDR43Q15061 677 aaKnown RBP eCLIP13.88□□□□□ -0.19
PSMC6-215ENST00000557517 TTLL7Q6ZT98 887 aa13.88□□□□□ -0.19
PSMC6-215ENST00000557517 NGEFQ8N5V2 710 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms