RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 PALLDQ8WX93 1383 aa13.49□□□□□ -0.25
TGFB3-207ENST00000557493 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
TGFB3-207ENST00000557493 PANK1Q8TE04 598 aa13.49□□□□□ -0.25
TGFB3-207ENST00000557493 WDR90Q96KV7 1748 aa13.49□□□□□ -0.25
TGFB3-207ENST00000557493 N4BP2Q86UW6 1770 aaPredicted RBP13.48□□□□□ -0.25
TGFB3-207ENST00000557493 ABCC4O15439 1325 aa13.48□□□□□ -0.25
TGFB3-207ENST00000557493 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.48□□□□□ -0.25
TGFB3-207ENST00000557493 PHF14O94880 888 aa13.48□□□□□ -0.25
TGFB3-207ENST00000557493 SLC39A6Q13433 755 aa13.48□□□□□ -0.25
TGFB3-207ENST00000557493 MVPQ14764 893 aaKnown RBP13.48□□□□□ -0.25
TGFB3-207ENST00000557493 SLC4A2P04920 1241 aa13.47□□□□□ -0.25
TGFB3-207ENST00000557493 SNRPA1P09661 255 aaKnown RBP13.47□□□□□ -0.25
TGFB3-207ENST00000557493 CLUAP1Q96AJ1 413 aa13.47□□□□□ -0.25
TGFB3-207ENST00000557493 CHMP4BQ9H444 224 aaKnown RBP13.47□□□□□ -0.25
TGFB3-207ENST00000557493 DDX19BQ9UMR2 479 aa13.47□□□□□ -0.25
TGFB3-207ENST00000557493 BCS1LQ9Y276 419 aa13.47□□□□□ -0.25
TGFB3-207ENST00000557493 COG6Q9Y2V7 657 aa13.47□□□□□ -0.25
TGFB3-207ENST00000557493 PXDNLA1KZ92 1463 aa13.47□□□□□ -0.25
TGFB3-207ENST00000557493 PCNTO95613 3336 aa13.47□□□□□ -0.25
TGFB3-207ENST00000557493 RLBP1P12271 317 aa13.46□□□□□ -0.25
TGFB3-207ENST00000557493 SSFA2P28290 1259 aa13.46□□□□□ -0.25
TGFB3-207ENST00000557493 ARHGAP27Q6ZUM4 889 aa13.46□□□□□ -0.25
TGFB3-207ENST00000557493 AMIGO3Q86WK7 504 aa13.46□□□□□ -0.25
TGFB3-207ENST00000557493 SMARCC1Q92922 1105 aaPredicted RBP13.46□□□□□ -0.25
TGFB3-207ENST00000557493 ZNF496Q96IT1 587 aaPredicted RBP13.46□□□□□ -0.25
TGFB3-207ENST00000557493 CCDC136Q96JN2 1154 aa13.46□□□□□ -0.25
TGFB3-207ENST00000557493 DBF4Q9UBU7 674 aaPredicted RBP13.46□□□□□ -0.25
TGFB3-207ENST00000557493 TNNQ9UQP3 1299 aa13.46□□□□□ -0.25
TGFB3-207ENST00000557493 EIF2S2P20042 333 aaKnown RBP13.45□□□□□ -0.26
TGFB3-207ENST00000557493 TGFB2P61812 414 aa13.45□□□□□ -0.26
TGFB3-207ENST00000557493 FLIIQ13045 1269 aa13.45□□□□□ -0.26
TGFB3-207ENST00000557493 ITPRIPQ8IWB1 547 aa13.45□□□□□ -0.26
TGFB3-207ENST00000557493 ERBB4Q15303 1308 aa13.44□□□□□ -0.26
TGFB3-207ENST00000557493 TMEM57Q8N5G2 664 aa13.44□□□□□ -0.26
TGFB3-207ENST00000557493 PIGBQ92521 554 aa13.44□□□□□ -0.26
TGFB3-207ENST00000557493 NECTIN2Q92692 538 aa13.44□□□□□ -0.26
TGFB3-207ENST00000557493 CHPF2Q9P2E5 772 aa13.44□□□□□ -0.26
TGFB3-207ENST00000557493 C4BP0C0L5 1744 aa13.44□□□□□ -0.26
TGFB3-207ENST00000557493 KDM2BQ8NHM5 1336 aa13.43□□□□□ -0.26
TGFB3-207ENST00000557493 FKBP5Q13451 457 aaPredicted RBP13.43□□□□□ -0.26
TGFB3-207ENST00000557493 C9orf131Q5VYM1 1079 aa13.43□□□□□ -0.26
TGFB3-207ENST00000557493 B4GALNT3Q6L9W6 998 aa13.43□□□□□ -0.26
TGFB3-207ENST00000557493 SMIM5Q71RC9 77 aa13.43□□□□□ -0.26
TGFB3-207ENST00000557493 HYPKQ9NX55 129 aa13.43□□□□□ -0.26
TGFB3-207ENST00000557493 SLC34A2O95436 690 aa13.42□□□□□ -0.26
TGFB3-207ENST00000557493 MMP10P09238 476 aa13.42□□□□□ -0.26
TGFB3-207ENST00000557493 HSPA1AP0DMV8 641 aaKnown RBP13.42□□□□□ -0.26
TGFB3-207ENST00000557493 HSPA1BP0DMV9 641 aaKnown RBP13.42□□□□□ -0.26
TGFB3-207ENST00000557493 G2E3Q7L622 706 aa13.42□□□□□ -0.26
TGFB3-207ENST00000557493 VSIG10Q8N0Z9 540 aa13.42□□□□□ -0.26
TGFB3-207ENST00000557493 DDX21Q9NR30 783 aaKnown RBP eCLIP13.42□□□□□ -0.26
TGFB3-207ENST00000557493 A0A0G2JLW4 131 aa13.41□□□□□ -0.26
TGFB3-207ENST00000557493 CCT4P50991 539 aaKnown RBP13.41□□□□□ -0.26
TGFB3-207ENST00000557493 INTS3Q68E01 1043 aaKnown RBP13.41□□□□□ -0.26
TGFB3-207ENST00000557493 SMC1BQ8NDV3 1235 aa13.41□□□□□ -0.26
TGFB3-207ENST00000557493 TEX13AQ9BXU3 409 aaPredicted RBP13.41□□□□□ -0.26
TGFB3-207ENST00000557493 ATG3Q9NT62 314 aa13.41□□□□□ -0.26
TGFB3-207ENST00000557493 TJP1Q07157 1748 aa13.41□□□□□ -0.26
TGFB3-207ENST00000557493 C10orf71Q711Q0 1435 aa13.4□□□□□ -0.26
TGFB3-207ENST00000557493 PRAMEF22A3QJZ6 481 aa13.4□□□□□ -0.26
TGFB3-207ENST00000557493 GNPATO15228 680 aa13.4□□□□□ -0.26
TGFB3-207ENST00000557493 DDX58O95786 925 aaKnown RBP13.4□□□□□ -0.26
TGFB3-207ENST00000557493 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
TGFB3-207ENST00000557493 PTCD1O75127 700 aaKnown RBP13.39□□□□□ -0.27
TGFB3-207ENST00000557493 LINC00116Q8NCU8 138 aa13.39□□□□□ -0.27
TGFB3-207ENST00000557493 ASAP1Q9ULH1 1129 aa13.39□□□□□ -0.27
TGFB3-207ENST00000557493 TAF1LQ8IZX4 1826 aa13.39□□□□□ -0.27
TGFB3-207ENST00000557493 LOC102724428A0A0B4J2F2 783 aa13.38□□□□□ -0.27
TGFB3-207ENST00000557493 DPEP1P16444 411 aa13.38□□□□□ -0.27
TGFB3-207ENST00000557493 SIK1P57059 783 aa13.38□□□□□ -0.27
TGFB3-207ENST00000557493 PHAXQ9H814 394 aaKnown RBP13.38□□□□□ -0.27
TGFB3-207ENST00000557493 RRAGCQ9HB90 399 aa13.38□□□□□ -0.27
TGFB3-207ENST00000557493 CCDC87Q9NVE4 849 aa13.38□□□□□ -0.27
TGFB3-207ENST00000557493 USP16Q9Y5T5 823 aa13.38□□□□□ -0.27
TGFB3-207ENST00000557493 UBR3Q6ZT12 1888 aa13.38□□□□□ -0.27
TGFB3-207ENST00000557493 PDIA6Q15084 440 aa13.37□□□□□ -0.27
TGFB3-207ENST00000557493 PROSER3Q2NL68 480 aa13.37□□□□□ -0.27
TGFB3-207ENST00000557493 SLC4A10Q6U841 1118 aa13.37□□□□□ -0.27
TGFB3-207ENST00000557493 CENPQQ7L2Z9 268 aaPredicted RBP13.37□□□□□ -0.27
TGFB3-207ENST00000557493 NLGN1Q8N2Q7 840 aa13.37□□□□□ -0.27
TGFB3-207ENST00000557493 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
TGFB3-207ENST00000557493 RNF181Q9P0P0 153 aa13.37□□□□□ -0.27
TGFB3-207ENST00000557493 F6X3S4 739 aa13.36□□□□□ -0.27
TGFB3-207ENST00000557493 STARD3NLO95772 234 aa13.36□□□□□ -0.27
TGFB3-207ENST00000557493 ANXA1P04083 346 aa13.36□□□□□ -0.27
TGFB3-207ENST00000557493 DNAAF4Q8WXU2 420 aa13.36□□□□□ -0.27
TGFB3-207ENST00000557493 ZBTB40Q9NUA8 1239 aa13.36□□□□□ -0.27
TGFB3-207ENST00000557493 ARFGEF2Q9Y6D5 1785 aa13.35□□□□□ -0.27
TGFB3-207ENST00000557493 ZBTB7BO15156 539 aaPredicted RBP13.35□□□□□ -0.27
TGFB3-207ENST00000557493 MYL6BP14649 208 aa13.35□□□□□ -0.27
TGFB3-207ENST00000557493 KSR2Q6VAB6 950 aa13.35□□□□□ -0.27
TGFB3-207ENST00000557493 IBTKQ9P2D0 1353 aaPredicted RBP13.34□□□□□ -0.27
TGFB3-207ENST00000557493 COL5A3P25940 1745 aaPredicted RBP13.34□□□□□ -0.27
TGFB3-207ENST00000557493 KIAA1551Q9HCM1 1747 aa13.34□□□□□ -0.27
TGFB3-207ENST00000557493 PI4KAP2A4QPH2 592 aa13.34□□□□□ -0.27
TGFB3-207ENST00000557493 ITPK1Q13572 414 aa13.34□□□□□ -0.27
TGFB3-207ENST00000557493 DNAJC10Q8IXB1 793 aa13.34□□□□□ -0.27
TGFB3-207ENST00000557493 PI4KAP1Q8N8J0 262 aa13.34□□□□□ -0.27
TGFB3-207ENST00000557493 XAGE3Q8WTP9 111 aa13.34□□□□□ -0.27
TGFB3-207ENST00000557493 SRCIN1Q9C0H9 1055 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms