RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CARD14Q9BXL6 1004 aa8.14□□□□□ -1.11
VPS33B-207ENST00000557470 GPHNQ9NQX3 736 aaPredicted RBP8.14□□□□□ -1.11
VPS33B-207ENST00000557470 ATG3Q9NT62 314 aa8.14□□□□□ -1.11
VPS33B-207ENST00000557470 BCS1LQ9Y276 419 aa8.14□□□□□ -1.11
VPS33B-207ENST00000557470 PCDHGA4Q9Y5G9 962 aa8.14□□□□□ -1.11
VPS33B-207ENST00000557470 ANKRD26Q9UPS8 1709 aa8.14□□□□□ -1.11
VPS33B-207ENST00000557470 WASHC2AQ641Q2 1341 aa8.13□□□□□ -1.11
VPS33B-207ENST00000557470 SLC34A2O95436 690 aa8.13□□□□□ -1.11
VPS33B-207ENST00000557470 NUDT7P0C024 238 aa8.13□□□□□ -1.11
VPS33B-207ENST00000557470 PHKG2P15735 406 aa8.13□□□□□ -1.11
VPS33B-207ENST00000557470 DPEP1P16444 411 aa8.13□□□□□ -1.11
VPS33B-207ENST00000557470 TGFB2P61812 414 aa8.13□□□□□ -1.11
VPS33B-207ENST00000557470 FOXK1P85037 733 aa8.13□□□□□ -1.11
VPS33B-207ENST00000557470 DSG2Q14126 1118 aa8.13□□□□□ -1.11
VPS33B-207ENST00000557470 ARHGAP27Q6ZUM4 889 aa8.13□□□□□ -1.11
VPS33B-207ENST00000557470 PLPP6Q8IY26 295 aa8.13□□□□□ -1.11
VPS33B-207ENST00000557470 SLC4A9Q96Q91 983 aa8.13□□□□□ -1.11
VPS33B-207ENST00000557470 HTRA3P83110 453 aa8.12□□□□□ -1.11
VPS33B-207ENST00000557470 TRAPPC3LQ5T215 181 aa8.12□□□□□ -1.11
VPS33B-207ENST00000557470 IFNL2Q8IZJ0 200 aa8.12□□□□□ -1.11
VPS33B-207ENST00000557470 NLGN1Q8N2Q7 840 aa8.12□□□□□ -1.11
VPS33B-207ENST00000557470 ARHGEF1Q92888 912 aaKnown RBP8.12□□□□□ -1.11
VPS33B-207ENST00000557470 RYDENQ9NUL5 291 aaKnown RBP8.12□□□□□ -1.11
VPS33B-207ENST00000557470 RTCBQ9Y3I0 505 aaKnown RBP8.12□□□□□ -1.11
VPS33B-207ENST00000557470 C4AP0C0L4 1744 aa8.12□□□□□ -1.11
VPS33B-207ENST00000557470 ZNF316A6NFI3 1004 aaPredicted RBP8.11□□□□□ -1.11
VPS33B-207ENST00000557470 FCHSD2O94868 740 aa8.11□□□□□ -1.11
VPS33B-207ENST00000557470 GYS1P13807 737 aa8.11□□□□□ -1.11
VPS33B-207ENST00000557470 MMRN1Q13201 1228 aa8.11□□□□□ -1.11
VPS33B-207ENST00000557470 CDCA8Q53HL2 280 aa8.11□□□□□ -1.11
VPS33B-207ENST00000557470 C9orf131Q5VYM1 1079 aa8.11□□□□□ -1.11
VPS33B-207ENST00000557470 RBM46Q8TBY0 533 aaKnown RBP8.11□□□□□ -1.11
VPS33B-207ENST00000557470 CCDC87Q9NVE4 849 aa8.11□□□□□ -1.11
VPS33B-207ENST00000557470 WDR90Q96KV7 1748 aa8.11□□□□□ -1.11
VPS33B-207ENST00000557470 BRCA1P38398 1863 aaKnown RBP8.11□□□□□ -1.11
VPS33B-207ENST00000557470 PCNTO95613 3336 aa8.1□□□□□ -1.11
VPS33B-207ENST00000557470 CNTNAP4Q9C0A0 1308 aa8.1□□□□□ -1.11
VPS33B-207ENST00000557470 COL5A3P25940 1745 aaPredicted RBP8.1□□□□□ -1.11
VPS33B-207ENST00000557470 KCNA3P22001 575 aa8.1□□□□□ -1.11
VPS33B-207ENST00000557470 RFC4P35249 363 aa8.1□□□□□ -1.11
VPS33B-207ENST00000557470 RC3H1Q5TC82 1133 aaKnown RBP8.1□□□□□ -1.11
VPS33B-207ENST00000557470 POLKQ9UBT6 870 aa8.1□□□□□ -1.11
VPS33B-207ENST00000557470 PARP3Q9Y6F1 533 aa8.1□□□□□ -1.11
VPS33B-207ENST00000557470 ZNF831Q5JPB2 1677 aa8.1□□□□□ -1.11
VPS33B-207ENST00000557470 PLEKHG2Q9H7P9 1386 aa8.1□□□□□ -1.11
VPS33B-207ENST00000557470 KCPQ6ZWJ8 1503 aa8.09□□□□□ -1.11
VPS33B-207ENST00000557470 ERVV-2B6SEH9 535 aa8.09□□□□□ -1.11
VPS33B-207ENST00000557470 RPS6KA4O75676 772 aa8.09□□□□□ -1.11
VPS33B-207ENST00000557470 EIF4A2Q14240 407 aaKnown RBP8.09□□□□□ -1.11
VPS33B-207ENST00000557470 COL13A1Q5TAT6 717 aaPredicted RBP8.09□□□□□ -1.11
VPS33B-207ENST00000557470 ZNF687Q8N1G0 1237 aa8.09□□□□□ -1.11
VPS33B-207ENST00000557470 JMYQ8N9B5 988 aa8.09□□□□□ -1.11
VPS33B-207ENST00000557470 KLRG1Q96E93 195 aa8.09□□□□□ -1.11
VPS33B-207ENST00000557470 CRISPLD2Q9H0B8 497 aa8.09□□□□□ -1.11
VPS33B-207ENST00000557470 LHX6Q9UPM6 363 aa8.09□□□□□ -1.11
VPS33B-207ENST00000557470 KDM6AO15550 1401 aaPredicted RBP8.09□□□□□ -1.11
VPS33B-207ENST00000557470 ARFGEF1Q9Y6D6 1849 aa8.08□□□□□ -1.12
VPS33B-207ENST00000557470 TNNT2P45379 298 aaPredicted RBP8.08□□□□□ -1.12
VPS33B-207ENST00000557470 DDR1Q08345 913 aa8.08□□□□□ -1.12
VPS33B-207ENST00000557470 FSTL1Q12841 308 aa8.08□□□□□ -1.12
VPS33B-207ENST00000557470 C16orf71Q8IYS4 520 aaPredicted RBP8.08□□□□□ -1.12
VPS33B-207ENST00000557470 PTCD2Q8WV60 388 aaKnown RBP8.08□□□□□ -1.12
VPS33B-207ENST00000557470 DCAF5Q96JK2 942 aa8.08□□□□□ -1.12
VPS33B-207ENST00000557470 RNF181Q9P0P0 153 aa8.08□□□□□ -1.12
VPS33B-207ENST00000557470 PIM2Q9P1W9 311 aa8.08□□□□□ -1.12
VPS33B-207ENST00000557470 SRP68Q9UHB9 627 aaKnown RBP8.08□□□□□ -1.12
VPS33B-207ENST00000557470 MYH14Q7Z406 1995 aaKnown RBP8.08□□□□□ -1.12
VPS33B-207ENST00000557470 KDM2BQ8NHM5 1336 aa8.07□□□□□ -1.12
VPS33B-207ENST00000557470 USP42Q9H9J4 1324 aaKnown RBP8.07□□□□□ -1.12
VPS33B-207ENST00000557470 PTCD1O75127 700 aaKnown RBP8.07□□□□□ -1.12
VPS33B-207ENST00000557470 HSP90AB1P08238 724 aaKnown RBP8.07□□□□□ -1.12
VPS33B-207ENST00000557470 CHRNA5P30532 468 aa8.07□□□□□ -1.12
VPS33B-207ENST00000557470 CRKLP46109 303 aaKnown RBP8.07□□□□□ -1.12
VPS33B-207ENST00000557470 DALRD3Q5D0E6 543 aaKnown RBP8.07□□□□□ -1.12
VPS33B-207ENST00000557470 ZNF530Q6P9A1 599 aaPredicted RBP8.07□□□□□ -1.12
VPS33B-207ENST00000557470 RRAGCQ9HB90 399 aa8.07□□□□□ -1.12
VPS33B-207ENST00000557470 TNRC6CQ9HCJ0 1690 aaKnown RBP8.06□□□□□ -1.12
VPS33B-207ENST00000557470 CABP4P57796 275 aa8.06□□□□□ -1.12
VPS33B-207ENST00000557470 POLRMTO00411 1230 aaKnown RBP8.05□□□□□ -1.12
VPS33B-207ENST00000557470 BRPF1P55201 1214 aaPredicted RBP8.05□□□□□ -1.12
VPS33B-207ENST00000557470 RASSF7Q02833 373 aa8.05□□□□□ -1.12
VPS33B-207ENST00000557470 PLEKHO1Q53GL0 409 aaPredicted RBP8.05□□□□□ -1.12
VPS33B-207ENST00000557470 AEBP1Q8IUX7 1158 aa8.05□□□□□ -1.12
VPS33B-207ENST00000557470 TJP1Q07157 1748 aa8.05□□□□□ -1.12
VPS33B-207ENST00000557470 ADAMTS7Q9UKP4 1686 aa8.05□□□□□ -1.12
VPS33B-207ENST00000557470 MTHFSP49914 203 aa8.04□□□□□ -1.12
VPS33B-207ENST00000557470 AMOTQ4VCS5 1084 aa8.04□□□□□ -1.12
VPS33B-207ENST00000557470 INTS5Q6P9B9 1019 aaKnown RBP8.04□□□□□ -1.12
VPS33B-207ENST00000557470 TNS4Q8IZW8 715 aa8.04□□□□□ -1.12
VPS33B-207ENST00000557470 NFATC2IPQ8NCF5 419 aa8.04□□□□□ -1.12
VPS33B-207ENST00000557470 SMC1BQ8NDV3 1235 aa8.04□□□□□ -1.12
VPS33B-207ENST00000557470 SBF1O95248 1867 aa8.04□□□□□ -1.12
VPS33B-207ENST00000557470 TM4SF1P30408 202 aa8.03□□□□□ -1.12
VPS33B-207ENST00000557470 PRELPP51888 382 aa8.03□□□□□ -1.12
VPS33B-207ENST00000557470 C1orf141Q5JVX7 400 aa8.03□□□□□ -1.12
VPS33B-207ENST00000557470 PPP1R15BQ5SWA1 713 aa8.03□□□□□ -1.12
VPS33B-207ENST00000557470 USPL1Q5W0Q7 1092 aa8.03□□□□□ -1.12
VPS33B-207ENST00000557470 POTEEQ6S8J3 1075 aa8.03□□□□□ -1.12
VPS33B-207ENST00000557470 ZC3H4Q9UPT8 1303 aaKnown RBP8.03□□□□□ -1.12
VPS33B-207ENST00000557470 ZPR1O75312 459 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms