RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 POTEAQ6S8J7 498 aa9.24□□□□□ -0.93
VRK1-207ENST00000557352 LRRC69Q6ZNQ3 347 aa9.24□□□□□ -0.93
VRK1-207ENST00000557352 MKL2Q9ULH7 1088 aa9.24□□□□□ -0.93
VRK1-207ENST00000557352 EFSO43281 561 aa9.23□□□□□ -0.93
VRK1-207ENST00000557352 EPXP11678 715 aa9.23□□□□□ -0.93
VRK1-207ENST00000557352 COL8A1P27658 744 aa9.23□□□□□ -0.93
VRK1-207ENST00000557352 LARP1Q6PKG0 1096 aaKnown RBP9.23□□□□□ -0.93
VRK1-207ENST00000557352 LINC00114Q6XXX2 140 aa9.23□□□□□ -0.93
VRK1-207ENST00000557352 SPOCK3Q9BQ16 436 aa9.23□□□□□ -0.93
VRK1-207ENST00000557352 RRAGCQ9HB90 399 aa9.23□□□□□ -0.93
VRK1-207ENST00000557352 STRN4Q9NRL3 753 aa9.23□□□□□ -0.93
VRK1-207ENST00000557352 KLF15Q9UIH9 416 aa9.23□□□□□ -0.93
VRK1-207ENST00000557352 GPC6Q9Y625 555 aaPredicted RBP9.23□□□□□ -0.93
VRK1-207ENST00000557352 NEURL1BA8MQ27 555 aa9.22□□□□□ -0.93
VRK1-207ENST00000557352 MSTNO14793 375 aa9.22□□□□□ -0.93
VRK1-207ENST00000557352 C21orf2O43822 256 aa9.22□□□□□ -0.93
VRK1-207ENST00000557352 LMOD1P29536 600 aaPredicted RBP9.22□□□□□ -0.93
VRK1-207ENST00000557352 HIRAP54198 1017 aaPredicted RBP9.22□□□□□ -0.93
VRK1-207ENST00000557352 SEC13P55735 322 aa9.22□□□□□ -0.93
VRK1-207ENST00000557352 CRTC2Q53ET0 693 aaPredicted RBP9.22□□□□□ -0.93
VRK1-207ENST00000557352 RHPN1Q8TCX5 695 aa9.22□□□□□ -0.93
VRK1-207ENST00000557352 BTBD6Q96KE9 485 aa9.22□□□□□ -0.93
VRK1-207ENST00000557352 CHMP3Q9Y3E7 222 aa9.22□□□□□ -0.93
VRK1-207ENST00000557352 HCN4Q9Y3Q4 1203 aa9.22□□□□□ -0.93
VRK1-207ENST00000557352 KRBA1A5PL33 1030 aa9.21□□□□□ -0.94
VRK1-207ENST00000557352 PPP1R12BO60237 982 aaPredicted RBP9.21□□□□□ -0.94
VRK1-207ENST00000557352 PROCP04070 461 aa9.21□□□□□ -0.94
VRK1-207ENST00000557352 PTK7Q13308 1070 aa9.21□□□□□ -0.94
VRK1-207ENST00000557352 C1orf53Q5VUE5 145 aa9.21□□□□□ -0.94
VRK1-207ENST00000557352 NEUROD4Q9HD90 331 aa9.21□□□□□ -0.94
VRK1-207ENST00000557352 MARK1Q9P0L2 795 aa9.21□□□□□ -0.94
VRK1-207ENST00000557352 ZNF777Q9ULD5 760 aaPredicted RBP9.21□□□□□ -0.94
VRK1-207ENST00000557352 AMPD1P23109 780 aa9.2□□□□□ -0.94
VRK1-207ENST00000557352 LAMC2Q13753 1193 aa9.2□□□□□ -0.94
VRK1-207ENST00000557352 PHACTR1Q9C0D0 580 aa9.2□□□□□ -0.94
VRK1-207ENST00000557352 AVENQ9NQS1 362 aaPredicted RBP9.2□□□□□ -0.94
VRK1-207ENST00000557352 ATAD2Q6PL18 1390 aa9.2□□□□□ -0.94
VRK1-207ENST00000557352 ADH6P28332 368 aa9.19□□□□□ -0.94
VRK1-207ENST00000557352 DPYDQ12882 1025 aa9.19□□□□□ -0.94
VRK1-207ENST00000557352 SCG3Q8WXD2 468 aaKnown RBP9.19□□□□□ -0.94
VRK1-207ENST00000557352 SUV39H2Q9H5I1 410 aa9.19□□□□□ -0.94
VRK1-207ENST00000557352 VRTNQ9H8Y1 702 aa9.19□□□□□ -0.94
VRK1-207ENST00000557352 FAM196BA6NMK8 535 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 USP17L15C9J2P7 530 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 USP17L10C9JJH3 530 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 USP17L13C9JLJ4 530 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 USP17L12C9JPN9 530 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 USP17L11C9JVI0 530 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 USP17L21D6R901 530 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 USP17L18D6R9N7 530 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 USP17L22D6RA61 530 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 USP17L17D6RBQ6 530 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 USP17L19D6RCP7 530 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 USP17L20D6RJB6 530 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 DGKGP49619 791 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 USP17L24Q0WX57 530 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 ZNF468Q5VIY5 522 aaPredicted RBP9.18□□□□□ -0.94
VRK1-207ENST00000557352 FCHSD1Q86WN1 690 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 STAG2Q8N3U4 1231 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 GAS2L2Q8NHY3 880 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 PRR12Q9ULL5 1215 aa9.18□□□□□ -0.94
VRK1-207ENST00000557352 PCBP4P57723 403 aaKnown RBP9.17□□□□□ -0.94
VRK1-207ENST00000557352 CFAP70Q5T0N1 1121 aa9.17□□□□□ -0.94
VRK1-207ENST00000557352 ANKMY2Q8IV38 441 aa9.17□□□□□ -0.94
VRK1-207ENST00000557352 HSH2DQ96JZ2 352 aa9.17□□□□□ -0.94
VRK1-207ENST00000557352 HINFPQ9BQA5 517 aa9.17□□□□□ -0.94
VRK1-207ENST00000557352 C2orf49Q9BVC5 232 aaPredicted RBP9.17□□□□□ -0.94
VRK1-207ENST00000557352 SFSWAPQ12872 951 aaKnown RBP9.16□□□□□ -0.94
VRK1-207ENST00000557352 GRIN2CQ14957 1233 aa9.16□□□□□ -0.94
VRK1-207ENST00000557352 CHSY3Q70JA7 882 aa9.16□□□□□ -0.94
VRK1-207ENST00000557352 ALYREFQ86V81 257 aaKnown RBP9.16□□□□□ -0.94
VRK1-207ENST00000557352 ALDH16A1Q8IZ83 802 aa9.16□□□□□ -0.94
VRK1-207ENST00000557352 CHMP7Q8WUX9 453 aaPredicted RBP9.16□□□□□ -0.94
VRK1-207ENST00000557352 ANKIB1Q9P2G1 1089 aa9.16□□□□□ -0.94
VRK1-207ENST00000557352 LGR5O75473 907 aa9.15□□□□□ -0.94
VRK1-207ENST00000557352 ZNF280CQ8ND82 737 aa9.15□□□□□ -0.94
VRK1-207ENST00000557352 SUSD3Q96L08 255 aa9.15□□□□□ -0.94
VRK1-207ENST00000557352 GNB5O14775 395 aa9.14□□□□□ -0.95
VRK1-207ENST00000557352 ARXQ96QS3 562 aa9.14□□□□□ -0.95
VRK1-207ENST00000557352 SYT9Q86SS6 491 aa9.13□□□□□ -0.95
VRK1-207ENST00000557352 NGLY1Q96IV0 654 aa9.13□□□□□ -0.95
VRK1-207ENST00000557352 CEP63Q96MT8 703 aa9.13□□□□□ -0.95
VRK1-207ENST00000557352 SLC30A3Q99726 388 aa9.13□□□□□ -0.95
VRK1-207ENST00000557352 BRD7Q9NPI1 651 aa9.13□□□□□ -0.95
VRK1-207ENST00000557352 ADAM23O75077 832 aa9.12□□□□□ -0.95
VRK1-207ENST00000557352 IGFBP4P22692 258 aa9.12□□□□□ -0.95
VRK1-207ENST00000557352 PIK3R2O00459 728 aa9.11□□□□□ -0.95
VRK1-207ENST00000557352 KCNQ4P56696 695 aa9.11□□□□□ -0.95
VRK1-207ENST00000557352 TYRO3Q06418 890 aa9.11□□□□□ -0.95
VRK1-207ENST00000557352 CDCA8Q53HL2 280 aa9.11□□□□□ -0.95
VRK1-207ENST00000557352 MDFIQ99750 246 aa9.11□□□□□ -0.95
VRK1-207ENST00000557352 SPEM2Q0P670 501 aa9.1□□□□□ -0.95
VRK1-207ENST00000557352 KCNH4Q9UQ05 1017 aa9.1□□□□□ -0.95
VRK1-207ENST00000557352 ELOA3CA0A087WX78 387 aaPredicted RBP9.09□□□□□ -0.95
VRK1-207ENST00000557352 ELOA3DA6NLF2 546 aaPredicted RBP9.09□□□□□ -0.95
VRK1-207ENST00000557352 SIN3BO75182 1162 aa9.09□□□□□ -0.95
VRK1-207ENST00000557352 RFX1P22670 979 aa9.09□□□□□ -0.95
VRK1-207ENST00000557352 BAG6P46379 1132 aa9.09□□□□□ -0.95
VRK1-207ENST00000557352 RTN1Q16799 776 aa9.09□□□□□ -0.95
VRK1-207ENST00000557352 ELOA3BQ3SY89 546 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms