RNA–Protein interactions for RNA: ENST00000557168.1

TRAV30-201, Transcript of T cell receptor alpha variable 30, humanhuman

APPRIS P1 BASIC

Gene TRAV30, Length 337 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30-201ENST00000557168 ZNF330Q9Y3S2 320 aaPredicted RBP6.55□□□□□ -1.36
TRAV30-201ENST00000557168 WDR33Q9C0J8 1336 aaKnown RBP6.54□□□□□ -1.36
TRAV30-201ENST00000557168 ZNF541Q9H0D2 1346 aa6.54□□□□□ -1.36
TRAV30-201ENST00000557168 ZC3H4Q9UPT8 1303 aaKnown RBP6.54□□□□□ -1.36
TRAV30-201ENST00000557168 AOC2O75106 756 aa6.54□□□□□ -1.36
TRAV30-201ENST00000557168 C1orf141Q5JVX7 400 aa6.54□□□□□ -1.36
TRAV30-201ENST00000557168 CYP4F22Q6NT55 531 aa6.54□□□□□ -1.36
TRAV30-201ENST00000557168 TBC1D2BQ9UPU7 963 aa6.54□□□□□ -1.36
TRAV30-201ENST00000557168 ZNF831Q5JPB2 1677 aa6.54□□□□□ -1.36
TRAV30-201ENST00000557168 COL15A1P39059 1388 aa6.54□□□□□ -1.36
TRAV30-201ENST00000557168 COL11A2P13942 1736 aaPredicted RBP6.53□□□□□ -1.36
TRAV30-201ENST00000557168 NRXN2Q9P2S2 1712 aa6.53□□□□□ -1.36
TRAV30-201ENST00000557168 SLC24A1O60721 1099 aa6.53□□□□□ -1.36
TRAV30-201ENST00000557168 HSP90AB1P08238 724 aaKnown RBP6.53□□□□□ -1.36
TRAV30-201ENST00000557168 PIP4K2AP48426 406 aaPredicted RBP6.53□□□□□ -1.36
TRAV30-201ENST00000557168 IRX6P78412 446 aaPredicted RBP6.53□□□□□ -1.36
TRAV30-201ENST00000557168 SULT6B1Q6IMI4 303 aa6.53□□□□□ -1.36
TRAV30-201ENST00000557168 PRR5LQ6MZQ0 368 aa6.53□□□□□ -1.36
TRAV30-201ENST00000557168 LDHDQ86WU2 507 aa6.53□□□□□ -1.36
TRAV30-201ENST00000557168 CNTROBQ8N137 903 aa6.53□□□□□ -1.36
TRAV30-201ENST00000557168 TAOK3Q9H2K8 898 aa6.53□□□□□ -1.36
TRAV30-201ENST00000557168 ZNF277Q9NRM2 450 aaPredicted RBP6.53□□□□□ -1.36
TRAV30-201ENST00000557168 KIF24Q5T7B8 1368 aa6.53□□□□□ -1.36
TRAV30-201ENST00000557168 NPC1L1Q9UHC9 1359 aa6.53□□□□□ -1.36
TRAV30-201ENST00000557168 FAM177BA6PVY3 158 aa6.52□□□□□ -1.37
TRAV30-201ENST00000557168 NPHP1O15259 732 aa6.52□□□□□ -1.37
TRAV30-201ENST00000557168 EPHX2P34913 555 aa6.52□□□□□ -1.37
TRAV30-201ENST00000557168 RGS19P49795 217 aa6.52□□□□□ -1.37
TRAV30-201ENST00000557168 SLC51AQ86UW1 340 aa6.52□□□□□ -1.37
TRAV30-201ENST00000557168 MCOLN1Q9GZU1 580 aa6.52□□□□□ -1.37
TRAV30-201ENST00000557168 PCDH10Q9P2E7 1040 aa6.52□□□□□ -1.37
TRAV30-201ENST00000557168 SCN11AQ9UI33 1791 aa6.52□□□□□ -1.37
TRAV30-201ENST00000557168 ANKRD26Q9UPS8 1709 aa6.51□□□□□ -1.37
TRAV30-201ENST00000557168 RASSF10A6NK89 507 aa6.51□□□□□ -1.37
TRAV30-201ENST00000557168 TRAF5O00463 557 aa6.51□□□□□ -1.37
TRAV30-201ENST00000557168 RNMTO43148 476 aaKnown RBP6.51□□□□□ -1.37
TRAV30-201ENST00000557168 PDE6BP35913 854 aa6.51□□□□□ -1.37
TRAV30-201ENST00000557168 MAP2K1Q02750 393 aaPredicted RBP6.51□□□□□ -1.37
TRAV30-201ENST00000557168 AMOTQ4VCS5 1084 aa6.51□□□□□ -1.37
TRAV30-201ENST00000557168 B4GALNT3Q6L9W6 998 aa6.51□□□□□ -1.37
TRAV30-201ENST00000557168 PRPF40BQ6NWY9 871 aaKnown RBP6.51□□□□□ -1.37
TRAV30-201ENST00000557168 CAPNS2Q96L46 248 aa6.51□□□□□ -1.37
TRAV30-201ENST00000557168 GPR101Q96P66 508 aaPredicted RBP6.51□□□□□ -1.37
TRAV30-201ENST00000557168 BRIP1Q9BX63 1249 aa6.51□□□□□ -1.37
TRAV30-201ENST00000557168 SLC52A2Q9HAB3 445 aa6.51□□□□□ -1.37
TRAV30-201ENST00000557168 HACL1Q9UJ83 578 aa6.51□□□□□ -1.37
TRAV30-201ENST00000557168 GJA3Q9Y6H8 435 aa6.51□□□□□ -1.37
TRAV30-201ENST00000557168 SCN4AP35499 1836 aa6.5□□□□□ -1.37
TRAV30-201ENST00000557168 TNRC18O15417 2968 aaPredicted RBP6.5□□□□□ -1.37
TRAV30-201ENST00000557168 IQCA1LA6NCM1 817 aa6.5□□□□□ -1.37
TRAV30-201ENST00000557168 A1BGP04217 495 aa6.5□□□□□ -1.37
TRAV30-201ENST00000557168 HMOX1P09601 288 aa6.5□□□□□ -1.37
TRAV30-201ENST00000557168 SOX10P56693 466 aa6.5□□□□□ -1.37
TRAV30-201ENST00000557168 DGKZQ13574 1117 aa6.5□□□□□ -1.37
TRAV30-201ENST00000557168 CDCA8Q53HL2 280 aa6.5□□□□□ -1.37
TRAV30-201ENST00000557168 PANK3Q9H999 370 aa6.5□□□□□ -1.37
TRAV30-201ENST00000557168 DDX21Q9NR30 783 aaKnown RBP eCLIP6.5□□□□□ -1.37
TRAV30-201ENST00000557168 TCERG1O14776 1098 aaKnown RBP6.49□□□□□ -1.37
TRAV30-201ENST00000557168 SRGNP10124 158 aa6.49□□□□□ -1.37
TRAV30-201ENST00000557168 EPS15P42566 896 aa6.49□□□□□ -1.37
TRAV30-201ENST00000557168 EIF5P55010 431 aaKnown RBP6.49□□□□□ -1.37
TRAV30-201ENST00000557168 CST9Q5W186 159 aa6.49□□□□□ -1.37
TRAV30-201ENST00000557168 DLK2Q6UY11 383 aa6.49□□□□□ -1.37
TRAV30-201ENST00000557168 SYNE4Q8N205 404 aa6.49□□□□□ -1.37
TRAV30-201ENST00000557168 C7orf43Q8WVR3 580 aa6.49□□□□□ -1.37
TRAV30-201ENST00000557168 CNKSR1Q969H4 720 aa6.49□□□□□ -1.37
TRAV30-201ENST00000557168 L3MBTL3Q96JM7 780 aaPredicted RBP6.49□□□□□ -1.37
TRAV30-201ENST00000557168 ZIC5Q96T25 663 aa6.49□□□□□ -1.37
TRAV30-201ENST00000557168 BEGAINQ9BUH8 593 aa6.49□□□□□ -1.37
TRAV30-201ENST00000557168 LTBP3Q9NS15 1303 aa6.49□□□□□ -1.37
TRAV30-201ENST00000557168 TRPM7Q96QT4 1865 aa6.48□□□□□ -1.37
TRAV30-201ENST00000557168 KCNQ3O43525 872 aa6.48□□□□□ -1.37
TRAV30-201ENST00000557168 RRP1P56182 461 aaKnown RBP6.48□□□□□ -1.37
TRAV30-201ENST00000557168 FKBP4Q02790 459 aaKnown RBP eCLIP6.48□□□□□ -1.37
TRAV30-201ENST00000557168 AKAP4Q5JQC9 854 aa6.48□□□□□ -1.37
TRAV30-201ENST00000557168 AMER1Q5JTC6 1135 aaPredicted RBP6.48□□□□□ -1.37
TRAV30-201ENST00000557168 STYK1Q6J9G0 422 aa6.48□□□□□ -1.37
TRAV30-201ENST00000557168 CNBD1Q8NA66 436 aa6.48□□□□□ -1.37
TRAV30-201ENST00000557168 MASTLQ96GX5 879 aa6.48□□□□□ -1.37
TRAV30-201ENST00000557168 SETDB2Q96T68 719 aa6.48□□□□□ -1.37
TRAV30-201ENST00000557168 RCAN3Q9UKA8 241 aa6.48□□□□□ -1.37
TRAV30-201ENST00000557168 ADAMTSL1Q8N6G6 1762 aa6.48□□□□□ -1.37
TRAV30-201ENST00000557168 LTBP1Q14766 1721 aa6.47□□□□□ -1.37
TRAV30-201ENST00000557168 A0A087WZG4 1122 aa6.47□□□□□ -1.37
TRAV30-201ENST00000557168 PRAMEF22A3QJZ6 481 aa6.47□□□□□ -1.37
TRAV30-201ENST00000557168 CAMTA2O94983 1202 aa6.47□□□□□ -1.37
TRAV30-201ENST00000557168 IL13P35225 146 aa6.47□□□□□ -1.37
TRAV30-201ENST00000557168 IARSP41252 1262 aaKnown RBP6.47□□□□□ -1.37
TRAV30-201ENST00000557168 ST5P78524 1137 aa6.47□□□□□ -1.37
TRAV30-201ENST00000557168 CNGB1Q14028 1251 aaPredicted RBP6.47□□□□□ -1.37
TRAV30-201ENST00000557168 MTHFSDQ2M296 383 aaKnown RBP6.47□□□□□ -1.37
TRAV30-201ENST00000557168 CCDC93Q567U6 631 aa6.47□□□□□ -1.37
TRAV30-201ENST00000557168 CIAPIN1Q6FI81 312 aa6.47□□□□□ -1.37
TRAV30-201ENST00000557168 MORC1Q86VD1 984 aa6.47□□□□□ -1.37
TRAV30-201ENST00000557168 NGEFQ8N5V2 710 aa6.47□□□□□ -1.37
TRAV30-201ENST00000557168 ZNF496Q96IT1 587 aaPredicted RBP6.47□□□□□ -1.37
TRAV30-201ENST00000557168 CCDC136Q96JN2 1154 aa6.47□□□□□ -1.37
TRAV30-201ENST00000557168 ZNF408Q9H9D4 720 aa6.47□□□□□ -1.37
TRAV30-201ENST00000557168 POLR2AP24928 1970 aaKnown RBP6.47□□□□□ -1.37
TRAV30-201ENST00000557168 COL4A5P29400 1685 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms