RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 PDRG1Q9NUG6 133 aa18.43■□□□□ 0.54
TMEM55B-207ENST00000557041 MCM2P49736 904 aa18.43■□□□□ 0.54
TMEM55B-207ENST00000557041 ERC1Q8IUD2 1116 aa18.43■□□□□ 0.54
TMEM55B-207ENST00000557041 CYP46A1Q9Y6A2 500 aa18.43■□□□□ 0.54
TMEM55B-207ENST00000557041 KDRP35968 1356 aa18.43■□□□□ 0.54
TMEM55B-207ENST00000557041 DDX46Q7L014 1031 aaKnown RBP18.42■□□□□ 0.54
TMEM55B-207ENST00000557041 RASEFQ8IZ41 740 aa18.42■□□□□ 0.54
TMEM55B-207ENST00000557041 LRRC2Q9BYS8 371 aa18.42■□□□□ 0.54
TMEM55B-207ENST00000557041 TLR7Q9NYK1 1049 aaKnown RBP18.42■□□□□ 0.54
TMEM55B-207ENST00000557041 CEBPZQ03701 1054 aaKnown RBP18.42■□□□□ 0.54
TMEM55B-207ENST00000557041 DDX21Q9NR30 783 aaKnown RBP eCLIP18.42■□□□□ 0.54
TMEM55B-207ENST00000557041 AK2P54819 239 aa18.42■□□□□ 0.54
TMEM55B-207ENST00000557041 FAM43AQ8N2R8 423 aa18.42■□□□□ 0.54
TMEM55B-207ENST00000557041 ZSCAN23Q3MJ62 389 aa18.41■□□□□ 0.54
TMEM55B-207ENST00000557041 RGS12O14924 1447 aa18.41■□□□□ 0.54
TMEM55B-207ENST00000557041 KLHL40Q2TBA0 621 aa18.41■□□□□ 0.54
TMEM55B-207ENST00000557041 PRIM1P49642 420 aaKnown RBP18.4■□□□□ 0.54
TMEM55B-207ENST00000557041 FKBP4Q02790 459 aaKnown RBP eCLIP18.4■□□□□ 0.54
TMEM55B-207ENST00000557041 EAF2Q96CJ1 260 aaPredicted RBP18.4■□□□□ 0.54
TMEM55B-207ENST00000557041 FMNL2Q96PY5 1086 aa18.4■□□□□ 0.54
TMEM55B-207ENST00000557041 SNRKQ9NRH2 765 aa18.4■□□□□ 0.54
TMEM55B-207ENST00000557041 PTH1RQ03431 593 aa18.4■□□□□ 0.54
TMEM55B-207ENST00000557041 LMBR1LQ6UX01 489 aa18.4■□□□□ 0.54
TMEM55B-207ENST00000557041 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.4■□□□□ 0.54
TMEM55B-207ENST00000557041 A1BGP04217 495 aa18.4■□□□□ 0.54
TMEM55B-207ENST00000557041 SNRPA1P09661 255 aaKnown RBP18.4■□□□□ 0.54
TMEM55B-207ENST00000557041 DDX11Q96FC9 970 aa18.4■□□□□ 0.54
TMEM55B-207ENST00000557041 NMIQ13287 307 aaPredicted RBP18.39■□□□□ 0.53
TMEM55B-207ENST00000557041 SGSM2O43147 1006 aa18.39■□□□□ 0.53
TMEM55B-207ENST00000557041 SYAP1Q96A49 352 aaPredicted RBP18.39■□□□□ 0.53
TMEM55B-207ENST00000557041 OSBPL3Q9H4L5 887 aa18.39■□□□□ 0.53
TMEM55B-207ENST00000557041 ESPNB1AK53 854 aa18.38■□□□□ 0.53
TMEM55B-207ENST00000557041 GPTP24298 496 aa18.38■□□□□ 0.53
TMEM55B-207ENST00000557041 WASHC4Q2M389 1173 aa18.38■□□□□ 0.53
TMEM55B-207ENST00000557041 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.38■□□□□ 0.53
TMEM55B-207ENST00000557041 SNX14Q9Y5W7 946 aa18.38■□□□□ 0.53
TMEM55B-207ENST00000557041 SLC52A2Q9HAB3 445 aa18.38■□□□□ 0.53
TMEM55B-207ENST00000557041 RBM8AQ9Y5S9 174 aaKnown RBP18.38■□□□□ 0.53
TMEM55B-207ENST00000557041 DIP2AQ14689 1571 aa18.38■□□□□ 0.53
TMEM55B-207ENST00000557041 RNF20Q5VTR2 975 aa18.37■□□□□ 0.53
TMEM55B-207ENST00000557041 CCDC129Q6ZRS4 1044 aa18.37■□□□□ 0.53
TMEM55B-207ENST00000557041 LIMCH1Q9UPQ0 1083 aa18.37■□□□□ 0.53
TMEM55B-207ENST00000557041 TFCP2Q12800 502 aa18.37■□□□□ 0.53
TMEM55B-207ENST00000557041 FAM173BQ6P4H8 233 aa18.37■□□□□ 0.53
TMEM55B-207ENST00000557041 BLOC1S2Q6QNY1 142 aa18.37■□□□□ 0.53
TMEM55B-207ENST00000557041 ALDH1L1O75891 902 aa18.37■□□□□ 0.53
TMEM55B-207ENST00000557041 TIMM10P62072 90 aa18.37■□□□□ 0.53
TMEM55B-207ENST00000557041 FBXW7Q969H0 707 aa18.37■□□□□ 0.53
TMEM55B-207ENST00000557041 LMBRD1Q9NUN5 540 aa18.37■□□□□ 0.53
TMEM55B-207ENST00000557041 NSFL1CQ9UNZ2 370 aaKnown RBP18.37■□□□□ 0.53
TMEM55B-207ENST00000557041 CNPY2Q9Y2B0 182 aa18.37■□□□□ 0.53
TMEM55B-207ENST00000557041 ERBB3P21860 1342 aa18.37■□□□□ 0.53
TMEM55B-207ENST00000557041 WDR33Q9C0J8 1336 aaKnown RBP18.37■□□□□ 0.53
TMEM55B-207ENST00000557041 RIMS1Q86UR5 1692 aaKnown RBP18.37■□□□□ 0.53
TMEM55B-207ENST00000557041 H3BQV1 296 aa18.36■□□□□ 0.53
TMEM55B-207ENST00000557041 ADCK5Q3MIX3 580 aa18.36■□□□□ 0.53
TMEM55B-207ENST00000557041 IFFO2Q5TF58 517 aa18.36■□□□□ 0.53
TMEM55B-207ENST00000557041 LARP1BQ659C4 914 aaKnown RBP18.36■□□□□ 0.53
TMEM55B-207ENST00000557041 NPHP3Q7Z494 1330 aa18.36■□□□□ 0.53
TMEM55B-207ENST00000557041 NRXN3Q9Y4C0 1643 aa18.36■□□□□ 0.53
TMEM55B-207ENST00000557041 CADPS2Q86UW7 1296 aa18.36■□□□□ 0.53
TMEM55B-207ENST00000557041 EVI5LQ96CN4 794 aa18.36■□□□□ 0.53
TMEM55B-207ENST00000557041 ZNF594Q96JF6 807 aaPredicted RBP18.36■□□□□ 0.53
TMEM55B-207ENST00000557041 TFIP11Q9UBB9 837 aaKnown RBP18.36■□□□□ 0.53
TMEM55B-207ENST00000557041 GOLIM4O00461 696 aa18.35■□□□□ 0.53
TMEM55B-207ENST00000557041 GJB2P29033 226 aa18.35■□□□□ 0.53
TMEM55B-207ENST00000557041 FAM184AQ8NB25 1140 aa18.35■□□□□ 0.53
TMEM55B-207ENST00000557041 PI4K2BQ8TCG2 481 aa18.35■□□□□ 0.53
TMEM55B-207ENST00000557041 PHKG2P15735 406 aa18.35■□□□□ 0.53
TMEM55B-207ENST00000557041 EPHA10Q5JZY3 1008 aa18.35■□□□□ 0.53
TMEM55B-207ENST00000557041 BABAM1Q9NWV8 329 aa18.35■□□□□ 0.53
TMEM55B-207ENST00000557041 ITSN1Q15811 1721 aa18.35■□□□□ 0.53
TMEM55B-207ENST00000557041 GADD45BO75293 160 aaPredicted RBP18.35■□□□□ 0.53
TMEM55B-207ENST00000557041 CHGBP05060 677 aa18.35■□□□□ 0.53
TMEM55B-207ENST00000557041 STK11IPQ8N1F8 1099 aa18.35■□□□□ 0.53
TMEM55B-207ENST00000557041 TMEM94Q12767 1356 aa18.34■□□□□ 0.53
TMEM55B-207ENST00000557041 GCKRQ14397 625 aa18.34■□□□□ 0.53
TMEM55B-207ENST00000557041 HSP90AB3PQ58FF7 597 aa18.34■□□□□ 0.53
TMEM55B-207ENST00000557041 USP48Q86UV5 1035 aa18.34■□□□□ 0.53
TMEM55B-207ENST00000557041 SEC62Q99442 399 aaKnown RBP18.33■□□□□ 0.53
TMEM55B-207ENST00000557041 DBNDD2Q9BQY9 259 aa18.33■□□□□ 0.53
TMEM55B-207ENST00000557041 STAP2Q9UGK3 403 aa18.33■□□□□ 0.53
TMEM55B-207ENST00000557041 AK9Q5TCS8 1911 aa18.33■□□□□ 0.53
TMEM55B-207ENST00000557041 APPP05067 770 aa18.33■□□□□ 0.52
TMEM55B-207ENST00000557041 SLFNL1Q499Z3 407 aa18.33■□□□□ 0.52
TMEM55B-207ENST00000557041 TTLL7Q6ZT98 887 aa18.33■□□□□ 0.52
TMEM55B-207ENST00000557041 NEURL1BA8MQ27 555 aa18.33■□□□□ 0.52
TMEM55B-207ENST00000557041 STX6O43752 255 aa18.33■□□□□ 0.52
TMEM55B-207ENST00000557041 HOXB7P09629 217 aa18.33■□□□□ 0.52
TMEM55B-207ENST00000557041 CAMK4Q16566 473 aa18.33■□□□□ 0.52
TMEM55B-207ENST00000557041 RAB11FIP4Q86YS3 637 aa18.33■□□□□ 0.52
TMEM55B-207ENST00000557041 GPT2Q8TD30 523 aa18.33■□□□□ 0.52
TMEM55B-207ENST00000557041 TMEM63CQ9P1W3 806 aa18.33■□□□□ 0.52
TMEM55B-207ENST00000557041 ADCY9O60503 1353 aa18.32■□□□□ 0.52
TMEM55B-207ENST00000557041 IGKV5-2P06315 115 aa18.32■□□□□ 0.52
TMEM55B-207ENST00000557041 HSPA4P34932 840 aa18.32■□□□□ 0.52
TMEM55B-207ENST00000557041 CHST3Q7LGC8 479 aa18.32■□□□□ 0.52
TMEM55B-207ENST00000557041 ZCRB1Q8TBF4 217 aaKnown RBP18.32■□□□□ 0.52
TMEM55B-207ENST00000557041 RBSNQ9H1K0 784 aa18.32■□□□□ 0.52
TMEM55B-207ENST00000557041 ZDHHC9Q9Y397 364 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms