RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 PNPLA7Q6ZV29 1317 aa30.01■■■□□ 2.4
SIX4-203ENST00000556952 DDX58O95786 925 aaKnown RBP30.01■■■□□ 2.39
SIX4-203ENST00000556952 B4GALNT3Q6L9W6 998 aa30.01■■■□□ 2.39
SIX4-203ENST00000556952 SMIM5Q71RC9 77 aa30.01■■■□□ 2.39
SIX4-203ENST00000556952 AK7Q96M32 723 aa30.01■■■□□ 2.39
SIX4-203ENST00000556952 SRCAPQ6ZRS2 3230 aa30.01■■■□□ 2.39
SIX4-203ENST00000556952 F6X3S4 739 aa30■■■□□ 2.39
SIX4-203ENST00000556952 MYL6BP14649 208 aa30■■■□□ 2.39
SIX4-203ENST00000556952 ADCY9O60503 1353 aa29.99■■■□□ 2.39
SIX4-203ENST00000556952 ATP10DQ9P241 1426 aa29.99■■■□□ 2.39
SIX4-203ENST00000556952 CNTNAP4Q9C0A0 1308 aa29.98■■■□□ 2.39
SIX4-203ENST00000556952 ARFGEF2Q9Y6D5 1785 aa29.98■■■□□ 2.39
SIX4-203ENST00000556952 SLC4A10Q6U841 1118 aa29.98■■■□□ 2.39
SIX4-203ENST00000556952 PI4KAP2A4QPH2 592 aa29.97■■■□□ 2.39
SIX4-203ENST00000556952 NBPF26B4DH59 902 aa29.97■■■□□ 2.39
SIX4-203ENST00000556952 GNPATO15228 680 aa29.97■■■□□ 2.39
SIX4-203ENST00000556952 HMGB2P26583 209 aaKnown RBP29.97■■■□□ 2.39
SIX4-203ENST00000556952 NBPF10Q6P3W6 841 aaKnown RBP29.97■■■□□ 2.39
SIX4-203ENST00000556952 KSR2Q6VAB6 950 aa29.97■■■□□ 2.39
SIX4-203ENST00000556952 NBPF15Q8N660 670 aa29.97■■■□□ 2.39
SIX4-203ENST00000556952 PI4KAP1Q8N8J0 262 aa29.97■■■□□ 2.39
SIX4-203ENST00000556952 DNAAF4Q8WXU2 420 aa29.97■■■□□ 2.39
SIX4-203ENST00000556952 ZBTB7BO15156 539 aaPredicted RBP29.96■■■□□ 2.39
SIX4-203ENST00000556952 A1BGP04217 495 aa29.96■■■□□ 2.39
SIX4-203ENST00000556952 CYP19A1P11511 503 aaPredicted RBP29.96■■■□□ 2.39
SIX4-203ENST00000556952 CRKLP46109 303 aaKnown RBP29.96■■■□□ 2.39
SIX4-203ENST00000556952 XAGE3Q8WTP9 111 aa29.96■■■□□ 2.39
SIX4-203ENST00000556952 ZBTB40Q9NUA8 1239 aa29.96■■■□□ 2.39
SIX4-203ENST00000556952 RC3H1Q5TC82 1133 aaKnown RBP29.94■■■□□ 2.38
SIX4-203ENST00000556952 COPS6Q7L5N1 327 aa29.94■■■□□ 2.38
SIX4-203ENST00000556952 C4AP0C0L4 1744 aa29.94■■■□□ 2.38
SIX4-203ENST00000556952 PHF14O94880 888 aa29.94■■■□□ 2.38
SIX4-203ENST00000556952 COL23A1Q86Y22 540 aaPredicted RBP29.94■■■□□ 2.38
SIX4-203ENST00000556952 PIP4K2AP48426 406 aaPredicted RBP29.93■■■□□ 2.38
SIX4-203ENST00000556952 AIMP1Q12904 312 aaKnown RBP29.93■■■□□ 2.38
SIX4-203ENST00000556952 INTS5Q6P9B9 1019 aaKnown RBP29.93■■■□□ 2.38
SIX4-203ENST00000556952 MAP3K2Q9Y2U5 619 aa29.92■■■□□ 2.38
SIX4-203ENST00000556952 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.91■■■□□ 2.38
SIX4-203ENST00000556952 ZBTB7AO95365 584 aa29.9■■■□□ 2.38
SIX4-203ENST00000556952 CCDC87Q9NVE4 849 aa29.9■■■□□ 2.38
SIX4-203ENST00000556952 SSFA2P28290 1259 aa29.9■■■□□ 2.38
SIX4-203ENST00000556952 ANKRD13DQ6ZTN6 518 aa29.9■■■□□ 2.38
SIX4-203ENST00000556952 RIC3Q7Z5B4 369 aa29.9■■■□□ 2.38
SIX4-203ENST00000556952 SRCIN1Q9C0H9 1055 aa29.9■■■□□ 2.38
SIX4-203ENST00000556952 LRP5O75197 1615 aa29.89■■■□□ 2.38
SIX4-203ENST00000556952 IBTKQ9P2D0 1353 aaPredicted RBP29.89■■■□□ 2.38
SIX4-203ENST00000556952 BEND3Q5T5X7 828 aa29.89■■■□□ 2.38
SIX4-203ENST00000556952 ZBTB1Q9Y2K1 713 aa29.89■■■□□ 2.38
SIX4-203ENST00000556952 RTCBQ9Y3I0 505 aaKnown RBP29.89■■■□□ 2.38
SIX4-203ENST00000556952 COL24A1Q17RW2 1714 aa29.88■■■□□ 2.37
SIX4-203ENST00000556952 RPS6KA4O75676 772 aa29.88■■■□□ 2.37
SIX4-203ENST00000556952 PLBD2Q8NHP8 589 aa29.88■■■□□ 2.37
SIX4-203ENST00000556952 MSH5O43196 834 aa29.87■■■□□ 2.37
SIX4-203ENST00000556952 AFDNP55196 1824 aaKnown RBP29.87■■■□□ 2.37
SIX4-203ENST00000556952 FLAD1Q8NFF5 587 aa29.86■■■□□ 2.37
SIX4-203ENST00000556952 PCDHB15Q9Y5E8 787 aa29.86■■■□□ 2.37
SIX4-203ENST00000556952 ALDH1L1O75891 902 aa29.86■■■□□ 2.37
SIX4-203ENST00000556952 IL6STP40189 918 aaPredicted RBP29.86■■■□□ 2.37
SIX4-203ENST00000556952 NEXNQ0ZGT2 675 aa29.85■■■□□ 2.37
SIX4-203ENST00000556952 LINS1Q8NG48 757 aa29.85■■■□□ 2.37
SIX4-203ENST00000556952 METTL22Q9BUU2 404 aaPredicted RBP29.85■■■□□ 2.37
SIX4-203ENST00000556952 GNAI3P08754 354 aa29.84■■■□□ 2.37
SIX4-203ENST00000556952 MEIS3Q99687 375 aa29.84■■■□□ 2.37
SIX4-203ENST00000556952 ATF5Q9Y2D1 282 aaPredicted RBP29.84■■■□□ 2.37
SIX4-203ENST00000556952 CENPQQ7L2Z9 268 aaPredicted RBP29.83■■■□□ 2.37
SIX4-203ENST00000556952 KDM2BQ8NHM5 1336 aa29.83■■■□□ 2.37
SIX4-203ENST00000556952 TTLL7Q6ZT98 887 aa29.82■■■□□ 2.36
SIX4-203ENST00000556952 ARHGEF1Q92888 912 aaKnown RBP29.82■■■□□ 2.36
SIX4-203ENST00000556952 MTFR1LQ9H019 292 aa29.82■■■□□ 2.36
SIX4-203ENST00000556952 TRAPPC3LQ5T215 181 aa29.81■■■□□ 2.36
SIX4-203ENST00000556952 KIF6Q6ZMV9 814 aa29.81■■■□□ 2.36
SIX4-203ENST00000556952 SLC16A10Q8TF71 515 aa29.81■■■□□ 2.36
SIX4-203ENST00000556952 ANKRD36CQ5JPF3 1778 aa29.81■■■□□ 2.36
SIX4-203ENST00000556952 COL15A1P39059 1388 aa29.8■■■□□ 2.36
SIX4-203ENST00000556952 ADRA2BP18089 450 aa29.8■■■□□ 2.36
SIX4-203ENST00000556952 NPM2Q86SE8 214 aaKnown RBP29.8■■■□□ 2.36
SIX4-203ENST00000556952 RWDD1Q9H446 243 aaPredicted RBP29.8■■■□□ 2.36
SIX4-203ENST00000556952 SPON1Q9HCB6 807 aa29.8■■■□□ 2.36
SIX4-203ENST00000556952 MSL1Q68DK7 614 aa29.79■■■□□ 2.36
SIX4-203ENST00000556952 USP44Q9H0E7 712 aa29.79■■■□□ 2.36
SIX4-203ENST00000556952 ZNF330Q9Y3S2 320 aaPredicted RBP29.79■■■□□ 2.36
SIX4-203ENST00000556952 EIF5P55010 431 aaKnown RBP29.78■■■□□ 2.36
SIX4-203ENST00000556952 HDAC1Q13547 482 aaPredicted RBP29.78■■■□□ 2.36
SIX4-203ENST00000556952 MYD88Q99836 296 aa29.78■■■□□ 2.36
SIX4-203ENST00000556952 PTGER2P43116 358 aa29.77■■■□□ 2.36
SIX4-203ENST00000556952 C1orf115Q9H7X2 142 aa29.77■■■□□ 2.36
SIX4-203ENST00000556952 GNAI2P04899 355 aa29.77■■■□□ 2.36
SIX4-203ENST00000556952 MAP3K15Q6ZN16 1313 aa29.76■■■□□ 2.36
SIX4-203ENST00000556952 IGKV5-2P06315 115 aa29.76■■■□□ 2.35
SIX4-203ENST00000556952 UBTFL1P0CB47 393 aaPredicted RBP29.76■■■□□ 2.35
SIX4-203ENST00000556952 CWF19L2Q2TBE0 894 aaKnown RBP29.76■■■□□ 2.35
SIX4-203ENST00000556952 SGIP1Q9BQI5 828 aa29.76■■■□□ 2.35
SIX4-203ENST00000556952 SRP68Q9UHB9 627 aaKnown RBP29.76■■■□□ 2.35
SIX4-203ENST00000556952 BCORQ6W2J9 1755 aa29.75■■■□□ 2.35
SIX4-203ENST00000556952 NUP98P52948 1817 aa29.75■■■□□ 2.35
SIX4-203ENST00000556952 NEURL1BA8MQ27 555 aa29.75■■■□□ 2.35
SIX4-203ENST00000556952 IGHDP01880 384 aa29.75■■■□□ 2.35
SIX4-203ENST00000556952 RFC4P35249 363 aa29.75■■■□□ 2.35
SIX4-203ENST00000556952 ZBTB3Q9H5J0 574 aa29.75■■■□□ 2.35
SIX4-203ENST00000556952 SCN7AQ01118 1682 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms