RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 OLFM4Q6UX06 510 aa8.4□□□□□ -1.06
LGMN-213ENST00000556790 GPBP1L1Q9HC44 474 aaPredicted RBP8.4□□□□□ -1.06
LGMN-213ENST00000556790 NMRK2Q9NPI5 230 aa8.4□□□□□ -1.06
LGMN-213ENST00000556790 ADAMTS8Q9UP79 889 aa8.4□□□□□ -1.06
LGMN-213ENST00000556790 LAS1LQ9Y4W2 734 aaKnown RBP8.4□□□□□ -1.06
LGMN-213ENST00000556790 SLX4Q8IY92 1834 aa8.4□□□□□ -1.07
LGMN-213ENST00000556790 MYBBP1AQ9BQG0 1328 aaKnown RBP8.39□□□□□ -1.07
LGMN-213ENST00000556790 NUP98P52948 1817 aa8.39□□□□□ -1.07
LGMN-213ENST00000556790 EIF2S2P20042 333 aaKnown RBP8.39□□□□□ -1.07
LGMN-213ENST00000556790 TMPOP42166 694 aaKnown RBP8.39□□□□□ -1.07
LGMN-213ENST00000556790 ZNF622Q969S3 477 aaKnown RBP eCLIP8.39□□□□□ -1.07
LGMN-213ENST00000556790 RNF181Q9P0P0 153 aa8.39□□□□□ -1.07
LGMN-213ENST00000556790 KIF3CO14782 793 aa8.38□□□□□ -1.07
LGMN-213ENST00000556790 HTATSF1O43719 755 aaKnown RBP8.38□□□□□ -1.07
LGMN-213ENST00000556790 C21orf2O43822 256 aa8.38□□□□□ -1.07
LGMN-213ENST00000556790 GPTP24298 496 aa8.38□□□□□ -1.07
LGMN-213ENST00000556790 HOXD11P31277 338 aaPredicted RBP8.38□□□□□ -1.07
LGMN-213ENST00000556790 RALBP1Q15311 655 aa8.38□□□□□ -1.07
LGMN-213ENST00000556790 NUTM1Q86Y26 1132 aa8.38□□□□□ -1.07
LGMN-213ENST00000556790 TEX13AQ9BXU3 409 aaPredicted RBP8.38□□□□□ -1.07
LGMN-213ENST00000556790 ZBTB3Q9H5J0 574 aa8.38□□□□□ -1.07
LGMN-213ENST00000556790 PRKRIP1Q9H875 184 aaPredicted RBP8.38□□□□□ -1.07
LGMN-213ENST00000556790 TSPYL4Q9UJ04 414 aa8.38□□□□□ -1.07
LGMN-213ENST00000556790 TRIM35Q9UPQ4 493 aa8.38□□□□□ -1.07
LGMN-213ENST00000556790 TIAM2Q8IVF5 1701 aa8.37□□□□□ -1.07
LGMN-213ENST00000556790 A0A087WZG4 1122 aa8.37□□□□□ -1.07
LGMN-213ENST00000556790 NFKBIEO00221 500 aa8.37□□□□□ -1.07
LGMN-213ENST00000556790 NPHP1O15259 732 aa8.37□□□□□ -1.07
LGMN-213ENST00000556790 NEFMP07197 916 aa8.37□□□□□ -1.07
LGMN-213ENST00000556790 HTRA3P83110 453 aa8.37□□□□□ -1.07
LGMN-213ENST00000556790 SETDB2Q96T68 719 aa8.37□□□□□ -1.07
LGMN-213ENST00000556790 NIP7Q9Y221 180 aaKnown RBP eCLIP8.37□□□□□ -1.07
LGMN-213ENST00000556790 ABCC12Q96J65 1359 aa8.36□□□□□ -1.07
LGMN-213ENST00000556790 H0YIN7 160 aa8.36□□□□□ -1.07
LGMN-213ENST00000556790 AIMP1Q12904 312 aaKnown RBP8.36□□□□□ -1.07
LGMN-213ENST00000556790 WDR43Q15061 677 aaKnown RBP eCLIP8.36□□□□□ -1.07
LGMN-213ENST00000556790 C3orf67Q6ZVT6 689 aa8.36□□□□□ -1.07
LGMN-213ENST00000556790 NPM2Q86SE8 214 aaKnown RBP8.36□□□□□ -1.07
LGMN-213ENST00000556790 NBPF5PQ86XG9 351 aaPredicted RBP8.36□□□□□ -1.07
LGMN-213ENST00000556790 TTLL6Q8N841 843 aa8.36□□□□□ -1.07
LGMN-213ENST00000556790 CNBD1Q8NA66 436 aa8.36□□□□□ -1.07
LGMN-213ENST00000556790 UBN2Q6ZU65 1347 aa8.35□□□□□ -1.07
LGMN-213ENST00000556790 TAF1P21675 1872 aa8.35□□□□□ -1.07
LGMN-213ENST00000556790 FER1L6Q2WGJ9 1857 aa8.35□□□□□ -1.07
LGMN-213ENST00000556790 TCERG1O14776 1098 aaKnown RBP8.35□□□□□ -1.07
LGMN-213ENST00000556790 PDIA6Q15084 440 aa8.35□□□□□ -1.07
LGMN-213ENST00000556790 ERFEQ4G0M1 354 aa8.35□□□□□ -1.07
LGMN-213ENST00000556790 SYNE4Q8N205 404 aa8.35□□□□□ -1.07
LGMN-213ENST00000556790 CNKSR2Q8WXI2 1034 aa8.35□□□□□ -1.07
LGMN-213ENST00000556790 RRAGCQ9HB90 399 aa8.35□□□□□ -1.07
LGMN-213ENST00000556790 ELL2O00472 640 aaPredicted RBP8.34□□□□□ -1.07
LGMN-213ENST00000556790 APAF1O14727 1248 aa8.34□□□□□ -1.07
LGMN-213ENST00000556790 SRGNP10124 158 aa8.34□□□□□ -1.07
LGMN-213ENST00000556790 SUSD4Q5VX71 490 aa8.34□□□□□ -1.07
LGMN-213ENST00000556790 PRPF40BQ6NWY9 871 aaKnown RBP8.34□□□□□ -1.07
LGMN-213ENST00000556790 LRP10Q7Z4F1 713 aa8.34□□□□□ -1.07
LGMN-213ENST00000556790 RUNDC1Q96C34 613 aa8.34□□□□□ -1.07
LGMN-213ENST00000556790 BRIP1Q9BX63 1249 aa8.34□□□□□ -1.07
LGMN-213ENST00000556790 ARFGEF2Q9Y6D5 1785 aa8.34□□□□□ -1.07
LGMN-213ENST00000556790 MAP3K15Q6ZN16 1313 aa8.33□□□□□ -1.08
LGMN-213ENST00000556790 PDE6BP35913 854 aa8.33□□□□□ -1.08
LGMN-213ENST00000556790 ST5P78524 1137 aa8.33□□□□□ -1.08
LGMN-213ENST00000556790 PNISRQ8TF01 805 aaKnown RBP8.33□□□□□ -1.08
LGMN-213ENST00000556790 XAGE3Q8WTP9 111 aa8.33□□□□□ -1.08
LGMN-213ENST00000556790 SALL2Q9Y467 1007 aaPredicted RBP8.33□□□□□ -1.08
LGMN-213ENST00000556790 COL4A1P02462 1669 aa8.33□□□□□ -1.08
LGMN-213ENST00000556790 LAMB2P55268 1798 aa8.33□□□□□ -1.08
LGMN-213ENST00000556790 KIF6Q6ZMV9 814 aa8.32□□□□□ -1.08
LGMN-213ENST00000556790 COPS6Q7L5N1 327 aa8.32□□□□□ -1.08
LGMN-213ENST00000556790 CHPF2Q9P2E5 772 aa8.32□□□□□ -1.08
LGMN-213ENST00000556790 ANKRD36CQ5JPF3 1778 aa8.32□□□□□ -1.08
LGMN-213ENST00000556790 DICER1Q9UPY3 1922 aaKnown RBP8.31□□□□□ -1.08
LGMN-213ENST00000556790 COL4A5P29400 1685 aa8.31□□□□□ -1.08
LGMN-213ENST00000556790 POTECB2RU33 542 aa8.31□□□□□ -1.08
LGMN-213ENST00000556790 CHL1O00533 1208 aa8.31□□□□□ -1.08
LGMN-213ENST00000556790 NTSR2O95665 410 aa8.31□□□□□ -1.08
LGMN-213ENST00000556790 POTEIP0CG38 1075 aa8.31□□□□□ -1.08
LGMN-213ENST00000556790 POTEJP0CG39 1038 aa8.31□□□□□ -1.08
LGMN-213ENST00000556790 LMNB1P20700 586 aa8.31□□□□□ -1.08
LGMN-213ENST00000556790 GTF2E1P29083 439 aaPredicted RBP8.31□□□□□ -1.08
LGMN-213ENST00000556790 RTL5Q5HYW3 569 aaPredicted RBP8.31□□□□□ -1.08
LGMN-213ENST00000556790 CLEC4GQ6UXB4 293 aa8.31□□□□□ -1.08
LGMN-213ENST00000556790 JARID2Q92833 1246 aaPredicted RBP8.31□□□□□ -1.08
LGMN-213ENST00000556790 TSR2Q969E8 191 aaKnown RBP8.31□□□□□ -1.08
LGMN-213ENST00000556790 MASTLQ96GX5 879 aa8.31□□□□□ -1.08
LGMN-213ENST00000556790 PNNQ9H307 717 aaKnown RBP8.31□□□□□ -1.08
LGMN-213ENST00000556790 ZNF277Q9NRM2 450 aaPredicted RBP8.31□□□□□ -1.08
LGMN-213ENST00000556790 MBIPQ9NS73 344 aa8.31□□□□□ -1.08
LGMN-213ENST00000556790 ZNF652Q9Y2D9 606 aa8.31□□□□□ -1.08
LGMN-213ENST00000556790 ATP5J2-PTCD1G3V325 749 aa8.3□□□□□ -1.08
LGMN-213ENST00000556790 DDNO94850 711 aaPredicted RBP8.3□□□□□ -1.08
LGMN-213ENST00000556790 HCLS1P14317 486 aaPredicted RBP8.3□□□□□ -1.08
LGMN-213ENST00000556790 STYK1Q6J9G0 422 aa8.3□□□□□ -1.08
LGMN-213ENST00000556790 TPTE2Q6XPS3 522 aa8.3□□□□□ -1.08
LGMN-213ENST00000556790 ZNF34Q8IZ26 560 aa8.3□□□□□ -1.08
LGMN-213ENST00000556790 C7orf43Q8WVR3 580 aa8.3□□□□□ -1.08
LGMN-213ENST00000556790 PHAXQ9H814 394 aaKnown RBP8.3□□□□□ -1.08
LGMN-213ENST00000556790 ZNF316A6NFI3 1004 aaPredicted RBP8.29□□□□□ -1.08
LGMN-213ENST00000556790 NPR1P16066 1061 aa8.29□□□□□ -1.08
LGMN-213ENST00000556790 HSPA6P17066 643 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms