RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 SMIM5Q71RC9 77 aa10.32□□□□□ -0.76
HNRNPC-226ENST00000556628 ZNF687Q8N1G0 1237 aa10.32□□□□□ -0.76
HNRNPC-226ENST00000556628 SLC52A2Q9HAB3 445 aa10.32□□□□□ -0.76
HNRNPC-226ENST00000556628 NUDCQ9Y266 331 aa10.32□□□□□ -0.76
HNRNPC-226ENST00000556628 CD2APQ9Y5K6 639 aa10.32□□□□□ -0.76
HNRNPC-226ENST00000556628 CNTNAP4Q9C0A0 1308 aa10.32□□□□□ -0.76
HNRNPC-226ENST00000556628 RNMTO43148 476 aaKnown RBP10.31□□□□□ -0.76
HNRNPC-226ENST00000556628 GRIN3BO60391 1043 aa10.31□□□□□ -0.76
HNRNPC-226ENST00000556628 RPS6KA4O75676 772 aa10.31□□□□□ -0.76
HNRNPC-226ENST00000556628 RFC4P35249 363 aa10.31□□□□□ -0.76
HNRNPC-226ENST00000556628 MTHFSDQ2M296 383 aaKnown RBP10.31□□□□□ -0.76
HNRNPC-226ENST00000556628 AMIGO3Q86WK7 504 aa10.31□□□□□ -0.76
HNRNPC-226ENST00000556628 NLGN1Q8N2Q7 840 aa10.31□□□□□ -0.76
HNRNPC-226ENST00000556628 SLC4A9Q96Q91 983 aa10.31□□□□□ -0.76
HNRNPC-226ENST00000556628 STK24Q9Y6E0 443 aa10.31□□□□□ -0.76
HNRNPC-226ENST00000556628 GAS2L2Q8NHY3 880 aa10.3□□□□□ -0.76
HNRNPC-226ENST00000556628 RNF166Q96A37 237 aaPredicted RBP10.3□□□□□ -0.76
HNRNPC-226ENST00000556628 LGR6Q9HBX8 967 aa10.3□□□□□ -0.76
HNRNPC-226ENST00000556628 COL3A1P02461 1466 aaPredicted RBP10.3□□□□□ -0.76
HNRNPC-226ENST00000556628 CICQ96RK0 1608 aaPredicted RBP10.29□□□□□ -0.76
HNRNPC-226ENST00000556628 MMP10P09238 476 aa10.29□□□□□ -0.76
HNRNPC-226ENST00000556628 CRKLP46109 303 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-226ENST00000556628 TEFQ10587 303 aa10.29□□□□□ -0.76
HNRNPC-226ENST00000556628 TTC5Q8N0Z6 440 aa10.29□□□□□ -0.76
HNRNPC-226ENST00000556628 FBXO22Q8NEZ5 403 aa10.29□□□□□ -0.76
HNRNPC-226ENST00000556628 ARHGEF1Q92888 912 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-226ENST00000556628 TJP1Q07157 1748 aa10.29□□□□□ -0.76
HNRNPC-226ENST00000556628 MRC1P22897 1456 aa10.29□□□□□ -0.76
HNRNPC-226ENST00000556628 C4AP0C0L4 1744 aa10.28□□□□□ -0.76
HNRNPC-226ENST00000556628 GNAT3A8MTJ3 354 aa10.28□□□□□ -0.76
HNRNPC-226ENST00000556628 ARSIQ5FYB1 569 aa10.28□□□□□ -0.76
HNRNPC-226ENST00000556628 PARP3Q9Y6F1 533 aa10.28□□□□□ -0.76
HNRNPC-226ENST00000556628 MYH14Q7Z406 1995 aaKnown RBP10.28□□□□□ -0.76
HNRNPC-226ENST00000556628 ADAMTS7Q9UKP4 1686 aa10.28□□□□□ -0.76
HNRNPC-226ENST00000556628 NEFMP07197 916 aa10.27□□□□□ -0.77
HNRNPC-226ENST00000556628 GYS1P13807 737 aa10.27□□□□□ -0.77
HNRNPC-226ENST00000556628 SLC39A6Q13433 755 aa10.27□□□□□ -0.77
HNRNPC-226ENST00000556628 ZNF784Q8NCA9 323 aaPredicted RBP10.27□□□□□ -0.77
HNRNPC-226ENST00000556628 CCDC87Q9NVE4 849 aa10.27□□□□□ -0.77
HNRNPC-226ENST00000556628 ZPR1O75312 459 aa10.26□□□□□ -0.77
HNRNPC-226ENST00000556628 U2AF1L5P0DN76 240 aaPredicted RBP10.26□□□□□ -0.77
HNRNPC-226ENST00000556628 YBX3P16989 372 aaKnown RBP eCLIP10.26□□□□□ -0.77
HNRNPC-226ENST00000556628 PPP2R1AP30153 589 aa10.26□□□□□ -0.77
HNRNPC-226ENST00000556628 PRKAR2BP31323 418 aa10.26□□□□□ -0.77
HNRNPC-226ENST00000556628 U2AF1Q01081 240 aaKnown RBP eCLIP10.26□□□□□ -0.776e-11■■□□□ 14.2
HNRNPC-226ENST00000556628 DNAJC10Q8IXB1 793 aa10.26□□□□□ -0.77
HNRNPC-226ENST00000556628 TGFB2P61812 414 aa10.25□□□□□ -0.77
HNRNPC-226ENST00000556628 VSIG10Q8N0Z9 540 aa10.25□□□□□ -0.77
HNRNPC-226ENST00000556628 RTF1Q92541 710 aaKnown RBP10.25□□□□□ -0.77
HNRNPC-226ENST00000556628 USP42Q9H9J4 1324 aaKnown RBP10.25□□□□□ -0.77
HNRNPC-226ENST00000556628 UBR2Q8IWV8 1755 aa10.24□□□□□ -0.77
HNRNPC-226ENST00000556628 KIF13BQ9NQT8 1826 aa10.24□□□□□ -0.77
HNRNPC-226ENST00000556628 KCPQ6ZWJ8 1503 aa10.24□□□□□ -0.77
HNRNPC-226ENST00000556628 GTPBP6O43824 516 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-226ENST00000556628 STARD3NLO95772 234 aa10.24□□□□□ -0.77
HNRNPC-226ENST00000556628 CYP19A1P11511 503 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-226ENST00000556628 INTS5Q6P9B9 1019 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-226ENST00000556628 NPM2Q86SE8 214 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-226ENST00000556628 TEX13AQ9BXU3 409 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-226ENST00000556628 RSPH6AQ9H0K4 717 aa10.24□□□□□ -0.77
HNRNPC-226ENST00000556628 SRP68Q9UHB9 627 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-226ENST00000556628 WWC3Q9ULE0 1092 aa10.24□□□□□ -0.77
HNRNPC-226ENST00000556628 SIPA1L3O60292 1781 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-226ENST00000556628 N4BP2Q86UW6 1770 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-226ENST00000556628 ZNF316A6NFI3 1004 aaPredicted RBP10.23□□□□□ -0.77
HNRNPC-226ENST00000556628 FCHSD2O94868 740 aa10.23□□□□□ -0.77
HNRNPC-226ENST00000556628 ZNF790Q6PG37 636 aa10.23□□□□□ -0.77
HNRNPC-226ENST00000556628 IL17REQ8NFR9 667 aa10.23□□□□□ -0.77
HNRNPC-226ENST00000556628 MFRPQ9BY79 579 aa10.23□□□□□ -0.77
HNRNPC-226ENST00000556628 TSHZ2Q9NRE2 1034 aa10.23□□□□□ -0.77
HNRNPC-226ENST00000556628 BTBD11A6QL63 1104 aa10.22□□□□□ -0.77
HNRNPC-226ENST00000556628 CANXP27824 592 aaKnown RBP10.22□□□□□ -0.77
HNRNPC-226ENST00000556628 USPL1Q5W0Q7 1092 aa10.22□□□□□ -0.77
HNRNPC-226ENST00000556628 PHACTR3Q96KR7 559 aa10.22□□□□□ -0.77
HNRNPC-226ENST00000556628 FMNL2Q96PY5 1086 aa10.22□□□□□ -0.77
HNRNPC-226ENST00000556628 ZBTB1Q9Y2K1 713 aa10.22□□□□□ -0.77
HNRNPC-226ENST00000556628 SOS1Q07889 1333 aaPredicted RBP10.22□□□□□ -0.77
HNRNPC-226ENST00000556628 COL15A1P39059 1388 aa10.22□□□□□ -0.77
HNRNPC-226ENST00000556628 C10orf71Q711Q0 1435 aa10.22□□□□□ -0.77
HNRNPC-226ENST00000556628 A0A087WZG4 1122 aa10.21□□□□□ -0.77
HNRNPC-226ENST00000556628 A0A0G2JLW4 131 aa10.21□□□□□ -0.77
HNRNPC-226ENST00000556628 KHSRPQ92945 711 aaKnown RBP eCLIP10.21□□□□□ -0.772e-7■■■□□ 17.4
HNRNPC-226ENST00000556628 PNNQ9H307 717 aaKnown RBP10.21□□□□□ -0.77
HNRNPC-226ENST00000556628 BCS1LQ9Y276 419 aa10.21□□□□□ -0.77
HNRNPC-226ENST00000556628 HEG1Q9ULI3 1381 aa10.21□□□□□ -0.78
HNRNPC-226ENST00000556628 PXDNLA1KZ92 1463 aa10.21□□□□□ -0.78
HNRNPC-226ENST00000556628 HTATSF1O43719 755 aaKnown RBP10.2□□□□□ -0.78
HNRNPC-226ENST00000556628 GIGYF1O75420 1035 aaPredicted RBP10.2□□□□□ -0.78
HNRNPC-226ENST00000556628 CEMIPQ8WUJ3 1361 aa10.2□□□□□ -0.78
HNRNPC-226ENST00000556628 ZNF496Q96IT1 587 aaPredicted RBP10.2□□□□□ -0.78
HNRNPC-226ENST00000556628 KIAA1551Q9HCM1 1747 aa10.2□□□□□ -0.78
HNRNPC-226ENST00000556628 NARFQ9UHQ1 456 aa10.2□□□□□ -0.78
HNRNPC-226ENST00000556628 ZNF330Q9Y3S2 320 aaPredicted RBP10.2□□□□□ -0.78
HNRNPC-226ENST00000556628 KIF3CO14782 793 aa10.19□□□□□ -0.78
HNRNPC-226ENST00000556628 DPEP1P16444 411 aa10.19□□□□□ -0.78
HNRNPC-226ENST00000556628 TM4SF1P30408 202 aa10.19□□□□□ -0.78
HNRNPC-226ENST00000556628 MCM10Q7L590 875 aa10.19□□□□□ -0.78
HNRNPC-226ENST00000556628 MAPK8IP3Q9UPT6 1336 aa10.18□□□□□ -0.78
HNRNPC-226ENST00000556628 C2orf72A6NCS6 295 aa10.18□□□□□ -0.78
HNRNPC-226ENST00000556628 POLRMTO00411 1230 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms